Daphnia pulicaria: 124343614
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Entry
124343614 CDS
T08670
Name
(RefSeq) ATP-dependent RNA helicase Ddx1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124343614
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124343614
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124343614
Spliceosome [BR:
dpz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124343614
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
124343614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
124343614
NCBI-ProteinID:
XP_046652963
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All DBs
Position
6:1040282..1043761
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AA seq
737 aa
AA seq
DB search
MAAFEEMGVLPQIAKRLEELDWMLPTDVQAEAVPMILGGGDVLMAAETGSGKTGAFCLPI
IQIVWETIKDIQSGKAPTASGNNSAATEPQDKWILSTYDRTPAMAVNPEGTLCQSRDAAW
SGIRATQGVVNKGKYFYEATVSDEGLCRVGWSLNEANLDLGTDRYGYGFGGTGKKSNNRQ
FDDYGTAYGLNDVIGCALDLDNRVISFFKNGVDLGKAFDINPEFKNKALFPAVALKNAEL
EFNFGQKPFKFAPPKNFVAVCQAAKDCRTVNSNSGVAMPAQVKLKANAPQAIIMEPSREL
AEQTYNEINNFKKYLDAPVIRTMLVVGGIPIKEQLSDLQKGVDIIVGTPGRLDELIKSEN
ILLTHCRFFVLDEADGLLQQGQGEIINRLHSRAPKITTDGKRLQMIVCSATLHSFEVKKM
ADRLMHFPTWIDLKGEDSVPETVHHVVITVDPRTDMSWHNLPKRIPTDGVHAKDRLTPTS
ATPEMLSEAVKLLKGEYCVRAIIEHKMDQAIIFCRTKVDCDNLETYLNSIDKQKFSCVCL
HADRKPQERTDNLEAFKQKKAKFLICTDVAARGLDIRGLPFMMNFTLPDDKSNYVHRIGR
VGRAERMGLALSFVSNVPEKVWFHGQWCPSHGKGCANTKLTNQGGCCIWYDEQQCLAEVE
EHLGITISQAGTDMKVPVDEFDGKVVYGQKKKATTSAYQSHVAQMAGAVQELAVQEMKAQ
LLFHSFANNAKKIFGSV
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttgaagaaatgggagttttgccacaaatcgcgaagcgtttagaagagcta
gattggatgctgcccacagatgtccaagctgaagctgtgccgatgattctaggtggagga
gatgttttaatggccgctgaaactggaagtgggaaaacaggggctttttgtctaccaatc
atccagattgtatgggaaacaattaaagatattcaaagtggaaaagctcctacagcatct
ggcaataatagtgctgctacagaaccacaagataagtggattttaagcacatacgatcga
acgcccgctatggctgtgaatcctgaaggaacattgtgtcaatcaagagatgcagcctgg
agtggtataagagctactcaaggggttgttaacaaagggaaatatttctacgaagcaaca
gtttcagacgaaggtctctgcagagtaggatggtcattgaacgaggctaatttggatctt
ggcactgatcgttatggctatggttttggtggcactggtaaaaaatccaataaccggcaa
tttgatgattacggaaccgcctatggattgaatgatgttatcggctgtgcacttgatctc
gacaatagagtcatctcgttctttaaaaacggcgtcgacctaggaaaagctttcgacatt
aatcccgagttcaagaacaaagctctctttcctgccgtagctctgaagaatgcggaatta
gaattcaactttggccaaaaacctttcaaatttgctccccctaagaattttgtagcagtt
tgtcaagcagctaaggattgtagaactgtgaactcgaattccggagttgcaatgcctgcg
caggtgaaattaaaagctaatgctccgcaggccatcatcatggagccgtctcgcgagtta
gcagaacagacttacaacgaaattaacaacttcaaaaaatatttggatgctcctgttatt
cggacgatgctcgtggttggcggtatccccatcaaagagcaactgagcgatcttcagaaa
ggagtggatatcattgttggcacaccgggccgattagatgagctgatcaaaagtgaaaac
atacttttaacccattgccgcttctttgttttagacgaagcggatgggttgttgcaacaa
ggtcaaggagagataatcaatcgcttgcattcccgagccccgaagatcactacggacgga
aaacgtcttcaaatgatcgtttgttctgccacacttcattcgttcgaagtgaagaagatg
gcggatcgtcttatgcattttccgacgtggatcgacttaaagggcgaggattctgttcca
gaaacagtacaccatgttgtgatcacagttgaccctcgcactgatatgtcatggcataat
ttgcctaagcgcataccgacggatggggtgcatgccaaagaccgcctaactcccacttct
gctacacctgaaatgctttcggaagccgtaaagctattgaagggagaatattgcgtccgg
gccataatcgaacataaaatggaccaggccattatcttctgccgaacgaaagtcgattgt
gataatcttgaaacgtacttgaattctatcgacaagcaaaaattctcgtgcgtatgcctc
catgcagaccggaagccgcaagaacgtaccgacaatctggaagcttttaaacaaaaaaaa
gccaagtttctcatctgtaccgacgtcgctgctagaggattggatatccgcggtttacct
ttcatgatgaacttcacactgccagatgataaatctaactacgttcaccgaatcggtcga
gttggtagagctgaacgaatgggattggctctttctttcgtttccaatgtcccggaaaaa
gtttggtttcacggccaatggtgtccttcgcacggaaaaggttgtgcgaatacaaaattg
accaatcagggaggctgttgcatctggtatgatgaacaacagtgtttggctgaagtagag
gaacatttgggcattacaatctcgcaagctggtactgatatgaaagttccagtggatgaa
ttcgatggaaaagtggtgtatgggcaaaagaagaaagctacaacttcggcttatcagagt
cacgtagctcaaatggcgggagctgttcaagaactggctgtccaagaaatgaaggctcag
ttacttttccattcattcgctaataatgctaagaaaattttcggatctgtttaa
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