KEGG   Daphnia pulicaria: 124343713
Entry
124343713         CDS       T08670                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
dpz  Daphnia pulicaria
Pathway
dpz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124343713
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpz03041]
    124343713
Spliceosome [BR:dpz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    124343713
 Complex C
   U5 SnRNP specific factors
    124343713
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_RFWD3 eIF2A Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_RIG_1st WD_LRWD1
Other DBs
NCBI-GeneID: 124343713
NCBI-ProteinID: XP_046653121
LinkDB
Position
6:complement(1221925..1224702)
AA seq 337 aa
MALVSVNNPSNNELVSATSGQVALQQGPARTSSLMAPIMLLAGHPGDIFSLKFHPDGQFL
VSTGFDRQIFLWNVYGECENFAVLSGHTGAVMDLQLSTDGDTIYTASTDKTICLWDTRTG
AKIKKLKGHSSFVNAIHPARRGPPLLCSASDDCNIKVWDPRKRTETVSLDNSYQATSVTF
NDTAEQVISAGIDNDVKVWDLRKNALLYSLKGHSDTVTGLTLSPDGSYVLSNSMDNSLRV
WDVRPFAPQERCIKMMVGHAHNFEKNLLRCSWSPDGTKVSAGSADRFVYIWDTTSRRIIY
KLPGHNGSVNDVVFHPKEPIVASGASDKLIYLGEIDA
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggcgcttgtgtcagtaaacaatcccagcaataatgaattggtgtcggccacctcgggt
caagtggccctgcaacaggggccagcacgaacgtctagcctcatggctcctataatgctc
ctggcaggacatcctggagatatctttagcctgaagttccatcctgacggccagtttttg
gtttccaccggctttgacagacaaatatttttgtggaatgtgtatggagagtgtgaaaac
tttgctgtgttgtctggtcacactggagcagtaatggatcttcagctgtctaccgatggt
gataccatttacactgctagtacagacaaaaccatttgtttgtgggacaccagaacagga
gctaaaatcaagaaactgaaaggccactcctcctttgtcaatgctattcatcctgcacga
agaggacctcctcttctctgcagcgcctcagatgactgcaacatcaaagtctgggatcca
agaaaaagaaccgagacagtatcattagataattcttaccaagcgacttccgtcaccttc
aacgataccgccgaacaagtcatttccgcaggcatcgacaacgatgttaaggtctgggac
ttgaggaaaaatgctctcctctactccttgaagggccattccgacactgtcacaggcttg
actctcagtcctgatggatcttacgtgttgtcaaactcgatggacaactctttacgtgtc
tgggatgtacgacctttcgctccacaagaacgttgtatcaaaatgatggttggccatgct
cacaactttgaaaagaatttacttcgctgctcatggtcacctgacggaaccaaagtttca
gcgggatctgccgaccgattcgtttacatttgggacactacatctcgtcgcatcatttac
aaattacctggtcacaacggaagtgttaatgacgttgtatttcatcctaaggaacctatt
gttgcatccggtgccagtgacaagctgatttacctaggcgaaattgacgcttaa

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