Daphnia pulicaria: 124343728
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Entry
124343728 CDS
T08670
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
dpz
Daphnia pulicaria
Pathway
dpz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124343728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124343728
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124343728
Prokaryotic type
Archaeal type
TFB
124343728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Motif
Other DBs
NCBI-GeneID:
124343728
NCBI-ProteinID:
XP_046653139
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All DBs
Position
6:2107981..2109955
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AA seq
318 aa
AA seq
DB search
MASNRGDGGGIRICCSAHPDAALIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKA
NADPSRVGGSENALLNGTDLSTMIGPGTGSASFDEHGVAKYQNRRTMSSSDRALVNAFKE
ISNMADRINLPRTIVDRANNLFKQVHDGKNLKGRSNDAIASACLYISCRQEGVPRTFKEI
CAVSKISKKEIGRCFKLILKALETSVDIITTADFMSRFCSNLGLPTMVQRAASHIARKAV
ELDIVPGRSPISVAAAAIYMASQASDEKSKKTQKEIGDIAGVADVTIRQSYKLMYPRAAE
LFPEDFRFTTPIEQLPQL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaatcggggtgatggaggcggtataagaatttgttgctctgcgcatcccgac
gctgctttgattgaggattatcgagcgggtgatcaaatttgctccgagtgtggacttgtt
gttggtgacagggtaattgatgttggttctgaatggcgaacattcagcaacgaaaaagcc
aatgcagatccttctcgtgttggtgggtcagaaaatgctttactaaatggaacagatctc
tcaaccatgattggacccggtactggcagtgcctcttttgatgagcatggtgtggcaaaa
taccaaaacagacggacaatgagcagctctgatcgtgcccttgtgaatgccttcaaagaa
atcagtaacatggctgacaggatcaacttacctaggactatagttgacagagcaaacaat
ttgttcaagcaggtccacgatggcaaaaacttgaaaggacgtagcaatgatgccattgcc
tctgcgtgtctatacatttcctgcagacaagaaggcgtcccgcgaacattcaaagaaatt
tgcgccgtcagtaagatcagcaagaaagaaattggaagatgtttcaagttgattctgaaa
gccctcgaaacttcagtcgacatcatcactaccgcagatttcatgtcccgtttctgttcg
aatcttggattgccgaccatggtgcagagagcggcatcgcatatcgctcgtaaagcagtc
gagcttgatatcgttcctggtcgttcaccgatctcagtagctgccgccgctatttacatg
gcttcacaggcgtcagatgaaaaatctaaaaagacccaaaaagagattggcgatatagct
ggtgtggctgacgtgaccatccggcaatcttataaactgatgtacccacgtgccgcagag
ctctttcctgaagatttcagatttactacacctattgagcaactccctcaactttaa
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