Daphnia pulicaria: 124344290
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Entry
124344290 CDS
T08670
Name
(RefSeq) dynein intermediate chain 3, ciliary-like
KO
K11143
dynein axonemal intermediate chain 2
Organism
dpz
Daphnia pulicaria
Pathway
dpz04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124344290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dpz03037
]
124344290
04812 Cytoskeleton proteins [BR:
dpz04812
]
124344290
Cilium and associated proteins [BR:
dpz03037
]
Motile cilia and associated proteins
Dynein arm
124344290
Cytoskeleton proteins [BR:
dpz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
124344290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_1st
Beta-prop_SPT8
DUF1059
Motif
Other DBs
NCBI-GeneID:
124344290
NCBI-ProteinID:
XP_046653741
LinkDB
All DBs
Position
6:21067640..21070278
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AA seq
644 aa
AA seq
DB search
MDLTCVVRRDIKLLSKRKCNFSDAVFHSSQSVDIFPDRELTASFTIAKNKEIGVQCQACD
ISALHINTECASTENRGVYHKEGGWPRDVNPHESDQTARYRKKIEKDEAYSHAVLNLGQQ
MEHYIKQNNVFNIYEDYFTDAPDVQTPDPNPLRTIHMLKDPSPIKRAVTGLSWSPDGGTK
LAAAYSDPFWKNLFDYKENDSYIWNIERAVQPEVVLRSMSQLRSVSFNPRDQHILAGGTI
FGAVGIWDVRKSQGPVECVPIGVGHSESVTSLIWSNSKAGGEFFSASGDGQVLWWDMRKL
NAPIDAILLDPSSNPRSESALSASCLEYDPSMPNKFLVGTRQGIVMNCNRRARTTAERIM
CQYEAHLGPVHGLHRHPQLPKIFLTVGDWTTNVWTEDIRDSPILTLKNQNVQLLAGAWSY
TRPSVIFTAATDGALYLWDILAQRLNPTLCTQVSDSPLLSLSTQEQGKIMAVGSKDGRLS
VIQISENLSSVTKNDKAALTSLLERETRREKTLEQRTKDGKGKQGSKTASGFHMAVTSVT
QSTGSLVVQQPPSPTSPSKKMFESLKETLQALNNKENTSDNEAVQNGIEPSADMMPAVDN
QGSQINLSISQPVEPTVDQTLQSAEDAFFETMNQDILSRGIDDK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggatcttacttgtgttgtgcgtcgtgatatcaaactgctcagcaaaagaaaatgtaac
ttttccgatgccgttttccattcatcgcaatcggtcgacattttccctgatcgggaactc
acggcatcgtttactatagccaagaacaaggaaatcggagttcaatgccaggcttgtgat
atatcagctcttcacatcaatacggaatgtgcttcgaccgagaatcgaggagtttatcac
aaagaaggcggttggcctcgcgacgtcaatccccatgaatccgatcaaacggctcgttat
cgcaagaaaatcgagaaggatgaagcttattctcacgctgtgcttaatctcggacagcaa
atggaacattacatcaaacaaaacaacgtgtttaacatctacgaggattattttactgat
gctcccgatgtacaaacgccagatccgaatcccctacgaaccattcatatgttaaaggat
ccgtcgccgataaaacgcgcagtcactggtcttagttggagtcccgatggaggaaccaaa
ttggccgctgcttattcagatcctttttggaaaaatctttttgattacaaggaaaacgat
tcttacatctggaatattgaaagggcagtgcagccggaagttgttttacgcagcatgagt
caactacgttcagtctcattcaatccgcgtgaccaacacattttagctggtggaacaatt
tttggcgctgtgggaatttgggacgttcgtaagagtcaaggtccagtcgaatgcgtcccc
attggtgtgggtcattcggaaagtgtcacttcgcttatttggagcaattcaaaggctgga
ggagaattcttctccgcctctggcgacggccaagttctttggtgggacatgcgaaaatta
aatgcgccaatagacgcaattttactggatcccagttcaaaccctcgatcagaaagcgct
ttatctgctagttgtctcgagtacgatccttctatgccaaacaaattcctagttggaaca
cgtcaaggtattgtgatgaattgcaacagaagagcccgaacaacagcggagaggataatg
tgccaatacgaggcacacttgggcccagttcacggtctacatcgccacccacaactgccc
aaaatctttttgacagtcggagattggaccacgaatgtttggaccgaggacattcgcgat
tcgcccattttaactttaaagaatcaaaatgtccagttactggccggagcgtggagttac
acacggccgtccgtcatattcactgctgcaaccgacggtgctctttacctgtgggatatt
ctagcccagcggctcaatcctacgttatgcacacaggttagcgattccccgcttttaagt
ctgagcacccaagaacagggaaaaatcatggcagttggcagcaaagacgggcgcttgtcc
gttattcaaataagcgaaaatttgtcgtcggttaccaaaaacgataaagcagcgctcacc
tcgttactggaacgagaaacccgacgagaaaagactttggagcagcggactaaagacggc
aagggtaaacaaggatccaaaacggcatctggatttcatatggcagttacgtcagtcaca
cagtcaactggctcattggtggttcagcaacctccgtctcccacctctccatctaaaaaa
atgtttgagagtttgaaggaaacactccaagcactaaataataaggagaatacaagcgac
aacgaggctgtacaaaatggtatcgaaccttctgctgatatgatgccagccgttgataac
cagggaagtcaaatcaacttatccatctcccagccagtggaacccaccgtggatcaaacc
ctacaatcagccgaagatgctttctttgaaactatgaatcaggatatcctttcccgtgga
atcgacgataaataa
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