Daphnia pulicaria: 124344463
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Entry
124344463 CDS
T08670
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dpz01002
]
124344463
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124344463
Enzymes [BR:
dpz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124344463
Peptidases and inhibitors [BR:
dpz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124344463
Ubiquitin system [BR:
dpz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124344463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
DUF3517
UCH_UBL1
UBA
UBA_7
UBA_RAD5A
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124344463
NCBI-ProteinID:
XP_046653970
LinkDB
All DBs
Position
6:complement(14002294..14013765)
Genome browser
AA seq
2732 aa
AA seq
DB search
MDVEDENISTLMAMGFPDIGEIKRALRLAKNDLNEAVAILTNDQSVSSYGPVADLNIDVD
MKEVAGVSKGSSEDASVSESGNDGFPETHLYELESRVFTDQWSIPYKKDESLHKCLAAAT
KLIEEGVWENDENMQRFLNKCMPEAFRKLLNSGAVQRWNSEIQKGIYNMLELFIDLLVVR
MKHKPVPVQMLNQVFSLACDLDCEWNCKNKGQQSEEKHWEDLFGPGEIFARSPENFNQDP
YGWLVDLLNHFGAKNGFGMMQDSFEEDLDPVSMAAILRPLGNCAELLNPSAVCPMLTKCV
EYAVNHVTMIEDKDLKNKDIGAVLELLVALKLLCKCLWPDLADRMNNIRLEVILRMLKTP
HFSTRMNALKEVSKLVEEAESTSPKKSSIPGDQLAEWLSDHQVLSVALEGNIDHVQYTDR
IKGLVEFLGPRLSSDELSQIWAMGEKSFHVVDNLHGVLAAAAPKLAPAQLDHLLLLVQEK
WQRNSNDRMREKLLSFLGQLGKECRVSKTGSKILETLWDLARYTGLPCHLVERALDEHLS
VLAEIPNKEQLRKTYVLRCIDDLKKGNQGTLPLLRHLLNVARSMVKGSGTYHKPDKTALA
EWNTNHEIVKLLLVSLGKCHSQAVASAKVLSQSLTQETIADTRYGYRHGQLIQAHLDLLQ
LLLKEADLYLPWARCKELWDTLVTNPDACEADRECCFQWFASCLGDMQPDTQSALFREKI
LKSNPAQLTLRGFECVKTFFESVNVSDGKMRRFGTQAMVEKLDPIGTDYFWQVALESPNE
DLAKEAMGHILDISYLHLAPRMKKDPATLHKKFINDCYKRLETQVPCSKATSSNTPAISL
VQLSSLTPDKKSGCLQHIRRLLELVEKYISVIEETHPAPRTILPHGLSFKGEPIGLHIKT
EDSKTDIDLLVHSHETVWAVKQKIASLLRLNAEQITLVIGDRPSPLGREQKSLSQLGCTD
KQTWVVKSTSGAGAVSGGAQLTELKENWDELPNTPSPVVGASPSDTVETEMEEASSLSTS
NTSAARMSFHIEQERSLPGIVMANGGQVFTMLYQLSEIDDLKIQETIRRLLHLIPTDPAV
LEVLEKVASRRSAASAFSTAASFDVDIRPRPSVGSLNALSASNTASTSPFARATAPTVVG
HAAIATSPTKSIPSLSISHKPSGLASNIRSASFRRAPQQLSVADKNDSKESVEDMLRGLL
NPTAPLMSPFRVLYNLEVLSGRLMPTFFDITTLNKTNVFKQEFLLACGLNFVSRVLRKDY
FSQDVNYEIRQGCCLIALQLARFLLCGEVDEAASSMAMKTQMTPSKLQLTPTKMTPTKIS
PIRQTTPIKIQLSPVKLQSVTTSLSFSCSPVKEISLETAKAALQVLQTLSEAEFLDMISC
FVRVCWAAAAGKLYLAAAPGSSPLPNKDGGGQSIDSGTGTGSNISVASSLLNPGRRSRQS
STGSTSSSSSCGDTDTAGLYFGICASNKELCSKDVLIACEALELLITCLEVRGTKELAAF
FSFPYVKDFIIDILLGCASSEVRDKASALFFRLSQAQSQSSKHPLTQILVKAPVPLWITS
CTTRGASQRLLSQCSQYFNLRCRLLSSLTVADQRSLGLVAVSMLNDEVGWLSNFTPYSGT
SSIEMEQADNALLAGHLNVVRGLLNCDGVNRKEAGKLLIPDLLNQYLFPASKLIAEGLKR
ASFLSTPTNINPKCSQSESRLAAYALIIELVVECKENLEAVVKQLISMHHRFNPDLAKEF
EFEPAVEGRAACNFVGLKNAGATCYMNSVIQQLYLIPGIKESILAIDDEDSDEDTLFFQF
QMVMGHLQDSKLQYYEPEKFWRCLRLRGQPVNVREQQDSFEFFTHLADSIDEHLFRNERE
KLFQNTLGGVFSDQMICKECPHRYEREQIFLALNLTVKSHNLLDSLEQFVKGELLEGDNA
YFCEECGVKRNTVKRMCIKTLPSTLVIQLKRFYYDWDAGRSLKFDDYFQFPWELDMAPYT
SEGIQERERTDSPGVDVTTATTSKNRNSLTLKSTRMSSSNYELVGVVVHSGQASAGHYYS
FIKERKRSEDRSGRNRWLKFNDTTVEEFDMNDTTLEAECFGGTYKAKSYDTTNGFPETRQ
RYWNGYILFYDRIEDPMKTPRTPRKGTSSSGANSSIVTRSRSFRAAGSLSSTPNKLSSAS
IGSVPQRDSLSQLSELLNHGERQGLFGGKMPAQVQQAVREENLRFLKSRDVYCPDYYEFI
YELCQANATKKTASNSCAVPSVNLALHFLCHTYLRIRAKESSRLSSWVDLINSYTSSYKE
CSMWAIDFWSGEEGTKHIRSFLLECPSRNVRHQFSKILENSLSSFFSHGGETNQPCLIKL
LESLLSMLDKDVPDNCKTCSQFFYLLSTYANMGVDQCQHLFQLGAFRKLLVFLLGADRVG
FNPPSPVLSPRENNSKPTPTGQKSLAIPMPAPSPTSTLQRRWSQTQAKDFHDLHTTLATM
ILHCDLQAQNSSITACDNTGRLPTPPEVTSVLYGQSSVFYFQELVVACCHLNNISGESSL
IRMLLYIARGQLDFSRTLLRETLHQCAVVSASELKNLAQLLQEILVLEDGLQFNRLQCVI
DGFTDKDGQSVEGVLALIQSQQSNDSRRAYQLMKFLVSLANRLQIAKDYLLQSPCKWQWS
VNWLKQKIEQSYWSPHADLSNENSNTRIFQRTTSAQVTLEEATALLTEFESSDMETETDL
DFGLAQSIETDETSTTQESTSKSKCRFSLGPS
NT seq
8199 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaagacgaaaatatcagcacgttaatggccatgggatttccggacatcgga
gaaatcaaacgagctttacgtttagccaagaatgatctaaatgaagcagttgctatcctc
accaatgatcagtcagtgtcatcttatggacctgttgctgacttaaacatcgatgttgac
atgaaagaggtagctggtgtttccaaaggatccagcgaagatgcttctgtgtctgaaagt
ggaaatgatggcttccctgaaacccacctgtatgaattagagtctagagtatttacagat
caatggtctattccttataaaaaggatgaaagtttgcataaatgcttagcagctgcgaca
aaactaatagaagaaggtgtttgggagaatgatgaaaacatgcagaggtttttgaataaa
tgcatgccagaggcattcagaaagttgttaaattctggagcagtgcagaggtggaactct
gaaattcaaaaaggaatctataatatgctggagctattcatagatcttcttgttgttcgc
atgaagcacaaaccagttcctgttcaaatgcttaaccaggtattctcacttgcctgtgat
ttagactgtgaatggaattgcaagaataaaggacaacagagtgaggaaaaacactgggaa
gatttatttggaccaggtgaaatatttgcaaggtcgccggaaaattttaatcaggatcca
tatggttggcttgtggaccttttgaatcattttggagccaaaaatggattcggcatgatg
caagatagctttgaagaagatcttgatccagtttccatggctgcgatattaagaccatta
ggaaactgtgccgaattgttaaatccatctgctgtgtgtcccatgcttacaaaatgtgtg
gagtatgctgttaatcatgttacgatgattgaagataaagatttaaaaaacaaggatatc
ggagctgtccttgaactactagttgcgctaaagttactctgcaaatgtttatggcctgac
cttgctgacagaatgaacaacattcgccttgaggtgatcctacgcatgctgaaaacacct
cattttagcacacgaatgaatgctctgaaagaagtttcaaagttagtggaggaagctgaa
tccacgtcgccaaagaaatcttctattccaggagatcagctggcagaatggttgtctgat
catcaggtgttgtcggttgctctggaaggcaatattgaccacgtacagtacaccgatcgg
attaaaggtcttgtcgaatttttgggtccacgcctaagctcggatgagttgagtcaaatc
tgggcaatgggagaaaaaagttttcatgtcgtggataatctacatggtgttcttgccgct
gctgctcccaaacttgccccggctcagttggatcatttgttgctgctcgttcaagagaaa
tggcagcgcaattccaacgatcgaatgagagaaaagttactcagctttcttggccagctt
ggtaaagaatgtcgagtatctaaaacgggttcaaagatattggaaacattatgggattta
gcccgctataccggacttccatgtcacttagttgagagagcactcgatgagcatttgagt
gtgttggctgaaataccgaacaaagagcaattaagaaaaacatatgttttgcgctgcatc
gacgatttgaagaaaggaaatcagggtacactcccactgcttcgtcatttgttgaatgtt
gctcggagcatggtaaaagggagtgggacttaccacaaacctgacaaaactgctttagca
gagtggaacactaatcacgaaattgttaaactattgctagtttcacttggaaagtgccat
tctcaggcagttgcttcagctaaagttttgtctcagtccttaacccaagagacgattgcg
gataccagatatgggtatcgacatggacagcttattcaagctcaccttgatttgttgcaa
ttactattgaaggaagctgacttataccttccgtgggctaggtgcaaggaattgtgggac
actcttgtgacaaacccagatgcatgtgaagctgacagagagtgttgttttcaatggttt
gcatcgtgcttgggagacatgcagcctgatacgcaaagtgctcttttccgcgaaaaaatt
ttgaagagtaaccctgcccaacttactctgagaggttttgagtgtgttaaaactttcttt
gaatccgtgaatgtgtcggatggcaaaatgcgaagatttggaacacaagcgatggttgaa
aaattggaccctattggcactgactatttttggcaagtagctttggagtctccaaatgaa
gacttagcaaaagaagccatggggcatattttagatatctcgtatttacatcttgctccc
cggatgaaaaaggatcctgcgactttgcataaaaagtttattaatgattgctataagcga
ttagagacccaagttccatgttccaaagccacatcttcaaacacgcctgcaatttctctt
gttcagctgtcgtcgttgacacccgacaaaaaatctggttgtcttcagcacatcaggcgg
ttgttagaacttgtcgaaaaatatataagtgtcatagaagaaacccatccagctccaaga
acaattttgcctcatggactatcatttaaaggagaaccaataggattacacataaaaacg
gaagattccaagacggacattgatttactggttcatagtcacgaaacggtatgggctgtc
aaacaaaagatagcatcgcttctacgcctcaacgccgaacaaattactttggtcataggc
gatcgcccttctcctctaggtcgagaacaaaagtcgttgagtcaactcggttgtacggac
aagcaaacttgggttgttaaatcaacgtctggggctggggctgtgtctggtggtgcgcag
ctaactgagttgaaagaaaattgggatgaattgccaaacactccatcacccgttgttgga
gcctctccgtcagatacggttgaaaccgaaatggaagaggcatccagccttagcacatcg
aatacctccgctgctcgaatgtctttccacattgaacaggagcgatccttgcctggcatt
gttatggctaacggtggccaagtctttaccatgctttatcaactttcggaaattgatgat
cttaagattcaagaaactattcgaaggctattacatttgattccgacggatcctgcagtc
ctagaagttctggaaaaagttgcctcgagacgatctgctgcgtctgcattttcgaccgct
gcttcgtttgacgttgatatacgtccacggccttcggttggaagtttaaatgctctcagt
gccagtaatactgcttcaacatcaccatttgcacgtgctactgcacccacagttgttggc
catgcagctattgcgacatcaccgacgaaaagcataccctcactttctatttctcataag
ccaagtgggttagctagtaatatacgctctgcaagctttcgccgtgcgccacaacaactt
tcagttgccgataagaacgattctaaggaatctgtggaggacatgctcagaggattactg
aatccaacagctccactcatgtctcctttccgtgtactttataatcttgaggttttgtct
ggacgattaatgccaacatttttcgacataactaccctgaacaagaccaacgtcttcaag
caagaatttctattggcttgtggattaaacttcgtgtctcgagttcttcgcaaggattat
ttttcgcaagatgtcaactatgaaatccgacaaggatgctgcttgattgctcttcaattg
gcccgctttttgttgtgtggtgaagttgatgaagcagcttcaagtatggcaatgaaaacc
caaatgactccttccaagttgcagttaacgccgacgaaaatgacgcctacgaaaatttca
cctattcgtcagactacgcctattaaaattcaactttctcctgtaaagctgcaatccgtc
accacttccttgagcttttcgtgtagccccgtcaaagaaatttctttggaaacggcaaaa
gcagccttgcaagtattgcaaaccttgagcgaagctgaatttcttgatatgatttcctgc
ttcgttcgcgtatgctgggcagccgctgcaggaaagttgtacctcgccgccgcacctggg
tcatcacctttgccgaacaaggacggtggtggtcagtcgattgatagtggcactggcact
ggcagcaatatcagcgtcgcatcatctctactcaatcccggcagacgaagtcgtcagagt
agtacgggtagcacaagtagcagtagcagttgcggagataccgatactgccggtctgtac
tttgggatttgcgcttccaacaaagaactctgcagcaaagatgttctcattgcctgtgaa
gctcttgagttgctgattacttgtctagaggtgcgagggacaaaagagctcgcagctttt
ttttccttcccctatgttaaagatttcatcatagatatacttcttggttgtgccagttca
gaagtgcgagacaaagcttctgctctgttttttagacttagccaagcacaaagtcagtcc
agtaaacatccactaactcagattttagtcaaagctccagtcccactatggataacatcg
tgtacaacgcgaggggcatcgcagcgactattatcgcagtgcagtcaatatttcaatttg
cggtgtcgactcttgtcgtcactgacggtagctgatcagcgcagtttaggactagtggct
gtatctatgctaaacgatgaagttggatggctgtccaatttcactccgtacagtggaact
tcatcgatcgagatggagcaagccgacaatgccttgctagctggtcatttaaatgtggtg
agaggactcctcaactgtgatggtgtaaaccgaaaagaagcagggaaactattaatacca
gaccttcttaatcaatatctctttccggcatcaaaattaattgccgaaggattaaaacgt
gctagtttcttgtctactccaacaaatattaatcctaaatgcagtcaatcggaatcgcgc
cttgctgcatatgcattgatcattgagttggttgttgaatgtaaggagaatcttgaagct
gtggtcaaacaactgatatccatgcaccatcgattcaacccagatttggctaaagaattt
gagtttgaaccagcagtggaaggtcgagcggcctgtaatttcgtggggttaaaaaatgca
ggcgcaacttgctatatgaactctgtaatccagcagttatatctcatcccaggcatcaaa
gagagcattttggcaatcgacgatgaagattcggacgaagacacgcttttcttccagttt
caaatggtcatgggacacttacaggattccaaacttcagtactatgagccagagaagttc
tggcgttgcttacgccttcgaggccaacctgtcaatgttcgtgaacaacaagactctttt
gagtttttcacacacttggctgatagtattgacgaacatcttttcagaaatgagcgtgaa
aaactttttcaaaacactcttggtggcgtttttagcgatcaaatgatttgcaaagaatgt
ccacatcgctatgaaagagagcaaattttccttgctctcaatctgacagtgaaaagtcac
aatctacttgattcactggagcagtttgttaaaggagaacttttagaaggagataatgct
tatttctgtgaagagtgcggcgtaaagagaaatacagttaaacgcatgtgcatcaagaca
ttgccttcaaccttggttattcagctgaagcgcttctactacgattgggatgcaggaagg
tcactcaagttcgatgactactttcaatttccatgggaattggatatggcaccgtacacg
tcagaaggcattcaagagcgagaacgaaccgacagtcctggtgttgatgttactacagca
actacatctaaaaatcgcaatagtttgactttaaagagtacgcgtatgtcttcaagcaat
tacgagcttgttggcgtcgttgtacacagtggacaagccagcgctggacactactactcc
tttattaaagaaagaaaacgttcggaagatcgttccggtcgtaatcgatggctgaaattc
aatgatacaaccgttgaagaattcgatatgaatgatacaactcttgaagctgaatgcttc
ggtggaacttacaaagcaaagagttatgatacaacgaatggatttccggaaacacgacaa
cgatattggaacggctatattctgttttatgacagaatcgaagatcccatgaaaactccg
cgaactcctcgtaagggaacaagcagctctggagcaaattctagcattgtgactagaagc
cgatctttccgagcagcaggatccttatcctctacgcctaacaaactttcatcagcttcg
attggatctgttccgcaacgtgacagtttaagccaattgtctgaattgctgaaccacggt
gaaaggcaaggcctttttggaggaaaaatgcccgcccaagtgcaacaagcagtgagagaa
gaaaatcttcgttttttgaaatctcgggacgtttactgtccggactactatgaatttatc
tacgaattatgtcaagccaatgcaaccaagaagactgcatccaattcatgtgcagtacca
tccgtaaatcttgcccttcactttttgtgccacacttatttacgaattcgagctaaagaa
tccagccgcctctcttcttgggtcgacctaatcaatagctacacatcatcttacaaagag
tgttcaatgtgggccattgatttttggtcaggggaagaaggaactaagcatattagatcc
tttctgctggagtgtccttctcgaaatgtacgccaccagttttcaaagatattggaaaat
tcgttgtcgagtttttttagtcatggaggggagacgaatcaaccgtgtctaataaaatta
ctggaatcgttgctgtccatgttggataaagatgtccctgataattgcaaaacatgctcg
caatttttttatcttctatcaacttatgcaaatatgggagttgaccagtgtcaacattta
tttcaacttggtgctttccgtaagctcctcgtgtttctgttgggagcagacagagtcgga
ttcaatcctccatcaccagttttatccccccgagaaaataattcgaagccaacaccaacc
ggacaaaaaagtcttgccatacctatgccagcaccttcccctacctctacactgcaaaga
aggtggagtcaaacgcaggcaaaggatttccatgatctccatacaacactggcaacaatg
atccttcattgcgatttgcaagcccaaaattccagcatcacagcctgtgacaatactggt
aggcttcctacaccaccggaagtaacttcagtgctgtatggacaaagttccgtattttac
tttcaggaattagtcgttgcgtgttgccatttaaataacataagtggtgaatcatcattg
atccgaatgctgttgtatattgctcggggacagctggatttctcgcggactctgcttcgt
gaaacattgcaccagtgcgcggttgtttcggctagtgaattgaaaaatttggcgcagctt
ctccaagaaattttggttttggaggatggtctgcagtttaaccgacttcagtgcgttatt
gatggttttactgacaaggacggccagtctgttgaaggcgttttagccttaatacaatcg
caacaaagcaacgacagcaggcgggcctatcagctaatgaaatttttagttagtcttgca
aatcgccttcaaattgcaaaagactacctgttgcaatcaccatgcaagtggcagtggtca
gtcaattggttgaagcaaaagattgagcaaagctactggtcaccccacgctgatcttagc
aatgagaattccaacacacgaatatttcaacgaacaacatctgctcaggttacattggaa
gaggctacagcacttctgaccgagtttgaatcgtcggacatggaaaccgaaacggatctt
gattttgggttagcgcagtctattgaaactgatgagacatctactacccaagaatctact
tctaaatcaaagtgtcgttttagcttaggtccctcttga
DBGET
integrated database retrieval system
