Daphnia pulicaria: 124344566
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Entry
124344566 CDS
T08670
Name
(RefSeq) spectrin beta chain-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
dpz
Daphnia pulicaria
Pathway
dpz04517
IgSF CAM signaling
dpz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124344566
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124344566
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dpz04812
]
124344566
Cytoskeleton proteins [BR:
dpz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124344566
Intermediate filaments
Intermediate filament-binding proteins
124344566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
T3SchapCesA
PH_11
Motif
Other DBs
NCBI-GeneID:
124344566
NCBI-ProteinID:
XP_046654091
LinkDB
All DBs
Position
6:complement(3171628..3188486)
Genome browser
AA seq
2847 aa
AA seq
DB search
MADDVTPDVVRVRAGKTADKRRSWHVARVAADIQRSLAEQSPTRQARSSWHPNDDWSLSY
HQGSGWATTADSGVSSDQVGQQQQQKASFSIASWADRPVPKEMDALANYSSKQPVHQQNS
SSDEDSQNDLVPPVFIVPVILSTTDPPDVQVLNQHKRIVTTLADNYIDVVVKELRDERES
VQKKTFQKWVNSHLVRVGNRIGDLYTDLRDGKMLLKLLEVLSGERLPRPTKGKMRIHCLE
NVDKALQFLRDQRVHLENMGSHDIVDGSSRLTLGLIWTIILRFQIQDITIEETDNNETRS
AKDALLLWCQMKTAGYQNVNIRNFTTSWRDGLAFNAIIHKHCPELVQYDKLSKSNAMFNL
NNAFNVAEQKLGLTKLLDAEDIYVDQPDEKSIITYVVTYYHYFSKLKQETVQGKRIGKVV
GLAMENDRMITEYETLTSDLLRWIESTIQSLSERDFANSLAGVQQQLLQFNNYRTLEKPP
KFVEKGNLEVLLFTLQSKMRANNQKPYFPKEGKMISDINKAWERLEKSEHERELTLREEL
IRQEKLEQLAARFDRKAGMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDILAY
EERVQAVVAVAQELEAENYHDIDRINARKDNVLRLWQYLLELLRARRMRLELSLQLQQNF
QEMLYILDSMEELKVRLLSEDYGKHLMGVEDLLQKHALVEADINVLGERVKMVVQHSQRF
LETEATGGFGPCDPAIIVDRVQQLEDAYAELVKLAVERRARLEESRKLWQFYWDMADEEN
WIKEKEHILSTGDIGHDLTTIHLLISKHKALEEDIASHEPALYSVVNVGEELIQQEHFGS
EKIQERITEMVEMWNHLCETAAYRRKRLEEAVSYHQFFTDADDVDTWMLDVLRLVSSEDV
GRDEANVQSLLKKHKDVTEELKNYASTIDALKEQSEQLGEQDRTSPEVVERLASIERRYR
ELMELAKLRKQRLLDALSLYKLFSEADGVEQWIGEKERMLETMVPAKDIEDVEVMRHRYD
GFDREMNANASRVAVVNQLARQLLHVEHPNSEDIVARQNQLNARWAELRDRAEAKRDELQ
SAHGVQTFHIECRETILWIEDKIRILQSTDSLEMDLTGIMTLQRRLSGMERDLAAIQAKL
DSLDKEAEKIGVEHPEEEEVIHERLGQIRSVWENLTQMLKERDAKLEEAGDLHRFLRDLD
HFQAWLTKTQTDVASEDIPASLAEAEKLLSQHQGIREEIDNYTDDYSRMMDYGERITAEE
TTSDDPQYMFLRERLKALRDGWEELHQMWENRQQLLSQSLNLQMFLRDAKQAEVLLAHQE
HVLSKDEMPANLEQAENAIKRHEAFLTTMDANDDKVNNVIQFAQRLEDEGHFAADKAQRK
AENISERREANRQRAVQLMEKLRDALQLQQFLQDCEELSEWIQEKNIIAQDETYRSAKTV
HSKWTRHQAFEAEIASNKDRLYHIQQAGEQLITEKPEIISTIDPRIQELSHQFDDLERTT
REKGERLFDANRQVLYEQTCDDIDTWMSDLEKQMVTGGTGEDLASVNILMQKQQMIETQM
AIKAQQVSELGAQAEYLERMTPEKVEDIQQKKEAVERRFDELKAPLVRRQRDLEKKKEAY
QFRRDVEDEKLWISDKMPLATASDNGNSLFNVNVLKKKNQSLRTEIDNHEQRIHLVCNNG
QKLIDEDHADSEEFSNLIEELLDTWQTLKDAMDNRRAKLLASERAQQYFFDASEAESWMS
EQELYMMVEDRGKDEISAQNLMKKHQTLELAVEDYAETIRSLGETSTQLIAEGHPDSDQI
AVRQAQVDKLYAGLRDLAQERRAKLEEALQLFMLSREVDDLRQWIADREVVAGSHELGQD
YDHVTLLWERFKEFARDTETIGTERVAAVNEIADQLMGARHSDAATIAEWKDDLNEAWAD
LLELIDTRTQMLAASRELHKFFHDCKDVLGRIVEKQNTLSDELGRDAGSVSALQRKHQNF
IQDLQTLQSQVQGVQEDSQRLQTAYAGDKAREITGREGEVVNAWLQLQALCEGRRQKLAD
TGDLFRFFSMVRTLVLWIEDLIRQMNTTEKPRDVSGVELLMNNHQSLKAEIDARGDNFSA
CIALGKELLSRGHYATNEIKEKLVALTNQRNSMLHRWEERWEHLQLILEVYQFARDAAVA
EGWLMAQESYLMSHELGHTIDEVENLIKKHEAFEKSAAAQEERFAALERLTTMEWSLHGD
GVRARSREWVVNRPSWHPGYFHPTSFVVDSPYRNLLRSISDQTPSPTCIKELFDESASNK
EDDRLFISNNSSASSSPHLSRLSHSTCVSDSSVSSSDASASGDKLKKRRKYLKKRSIKRR
NTSQSFKSPQEGCSGKAESPSAVYCEEWIFSNANHQPDLSKRLTFAGLSDFEQKKVSDSL
ELRRKSLENDLSKSPKKNSSWLNIWQNILRISPKAKSKPQEPVNIEIRPMVGRVSALPSI
SEGGLSETQSAHSTPSVTQFSVALSSASGSVTACNAQSSNTTNHKYELKELKRRQEDDER
QRAEELAAQQAALAALHSPPEGSHHDQTDGDTSPSEPISGSTDKDPTTEATEGRASPKAE
QAIKPVPVHAKVEATSSPSYSASGQTVPVSPSSPGASSTTASSTGRSARPSDTSRTPTTT
TSPPKGKGSRSRSKSPFRSFRWKKSSKSQLPSGVGSVSDDEAAACDDEEERRSSVAGGDD
VYEGTVTRKHEWESTTKKASSRSWDKVYLTLRQGDLAVYKDQKTARGTPEAHYRNESPLD
IRTAVAEVAADYTKKRHVFRLKLSNGGEYLFQAKDDEEMNGWVTKLQASTTAAVESASAG
SSRAQTMPAQATKDEPKKRSFFTLKKK
NT seq
8544 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacgtaacgccagatgtggtgcgagtgcgagccggcaaaacggccgacaag
cgtcggagttggcatgttgctcgcgtagctgccgacattcaacgctcactggctgaacaa
agtcctacgagacaagcaaggtccagttggcatcctaacgatgattggagcttgtcttat
catcaaggctcgggctgggccacaacggccgatagtggcgtcagtagcgaccaggtagga
cagcagcagcagcagaaagccagtttctctatcgcttcgtgggctgaccgtccggttccc
aaggaaatggacgccctagccaattattcgtcgaaacaacctgtgcaccaacaaaatagt
agctccgatgaggatagccaaaacgatcttgtgcctccagttttcattgttccagtgatt
ttatccacaacggacccacctgatgtccaagtgctcaaccaacacaaacgaattgtcacc
actttggctgacaattacattgacgtcgtcgtcaaagagttgcgagatgaacgtgagagt
gtacaaaagaagacgttccaaaaatgggtcaattctcatcttgtacgcgtcggaaatcgc
atcggagatctttacacagatctccgcgatggcaaaatgcttttgaaactactagaagtt
ctctctggcgaacgtctgccgcgtccgaccaaaggcaaaatgcgtattcattgcctggag
aacgtggacaaggctctgcagttcctccgagatcagcgtgtccatttggaaaacatgggc
tctcatgatatcgtggacggcagttcccgtttaactcttggtcttatctggaccattatt
cttcgtttccagattcaagacattacaattgaggagacagataataacgaaacacgttcg
gccaaggacgcccttttgctctggtgtcaaatgaaaaccgccggttatcagaacgtcaac
attcgaaatttcacgacttcgtggcgcgatggtttggctttcaacgccattattcacaaa
cactgcccggaattggtccagtacgacaaactctccaaatccaacgccatgtttaacttg
aacaacgccttcaatgtggctgaacaaaagctcggtctcaccaaactgctcgacgccgaa
gacatttacgtcgaccagcccgatgagaaatccatcatcacatacgttgtcacctactat
cactatttctccaagttaaagcaagaaactgtccagggaaaacgtattggcaaggttgtt
ggtctcgccatggagaacgaccgcatgatcaccgagtacgagactttgacgagtgacttg
cttcgctggatcgagtcgacaatccagtcgctaagcgagcgtgactttgccaactcgctg
gccggtgtccagcagcagctgttgcaattcaataattaccgcacgctggagaagccgccc
aagtttgtggagaagggcaacttggaagtgttgctcttcacccttcagtcaaagatgagg
gccaataatcagaaaccctatttccccaaagaaggcaaaatgatctctgatattaacaag
gcgtgggagcgtctggaaaagtcagagcacgagcgtgagctcactcttcgcgaagaactc
atccgtcaagaaaagttggagcagttggctgcccgatttgatcgcaaggccggcatgaga
gaaacttggctcagtgaaaatcaacgtctcgtctcccaggacaactttggattcgacttg
gccgctgttgaagctgccgctaagaaacacgaggccatcgagaccgacattcttgcctat
gaggaacgtgtccaggcggttgtggctgtcgcacaggagttggaggcagaaaattatcac
gacatcgatcgcatcaacgctcgtaaagacaacgttcttcgcctatggcagtatctccta
gaattgctcagagcaagacgcatgcgtttggaactttcccttcagctgcaacaaaacttc
caggaaatgctttatatcttggactcgatggaagaattgaaagtccgcctgttgtcggaa
gattacggtaaacatttgatgggcgtcgaagacctgcttcaaaagcacgccctggtcgaa
gcagacatcaacgtcttgggagaacgcgttaaaatggtagtccagcactcgcaacgcttc
ttggagactgaagctactggtggatttggtccgtgcgatcccgccattattgtcgatcgc
gtccaacagctcgaggatgcctacgctgaactggttaaactggccgtggagcgccgtgct
cgcttggaagaaagccgcaaactttggcaattttactgggacatggctgacgaagaaaac
tggatcaaggaaaaagaacacattttgtcgactggcgatattgggcatgatttgactacc
attcacctgctcatctcgaaacacaaggctctagaagaggacattgccagccatgagccg
gccctctattcggtagtcaacgttggcgaagagcttattcagcaggagcatttcggctcg
gaaaagatccaagagcgcattaccgagatggtagagatgtggaatcacttatgcgaaacg
gccgcctacagacgcaagcgattggaggaagccgtcagctaccaccagttctttaccgat
gccgatgatgttgacacttggatgctggatgttttgcgactggtttccagtgaagatgtt
ggccgcgatgaagccaacgtccagtctctacttaaaaaacacaaggacgttacagaggaa
cttaagaattacgcctccacaatcgatgctcttaaagagcagtctgaacaactcggcgag
caggatcgtacttcacccgaagtcgtcgaacgtttggctagcatcgagcgtcgctacagg
gaattgatggaattggctaaactgcgcaaacaacgtttgttagatgccctttcactgtac
aagctgttctcagaagctgacggagttgaacaatggattggtgagaaagaacgcatgttg
gagacaatggttccggccaaggacattgaagatgtcgaagtcatgcgtcatcgctacgac
ggtttcgatcgtgagatgaacgccaatgcttcccgtgtggcagttgtcaatcaactggcc
cgccaattgcttcacgttgaacatccgaattcggaagatattgtggctcgccaaaatcag
ctcaacgcccgctgggccgagttgcgtgatcgagcggaagccaagagagatgaacttcaa
tcagcccatggtgtccagacgttccacatcgaatgtcgcgaaaccatcttgtggattgaa
gacaagatccgcattctccaatccaccgacagtttggaaatggatttgactggcatcatg
acattgcagcgtcgcctgtccggcatggaacgcgacctagccgctatccaggctaaattg
gactctcttgataaggaagccgagaagatcggcgtagaacatcccgaagaagaagaggtt
atccacgaacgcctgggacaaatccgctcagtttgggagaacttgactcagatgttgaaa
gagcgcgatgctaaattggaagaggctggtgatctgcaccgcttcttgcgcgacttggat
cacttccaggcgtggttgaccaagacccagacagatgtagcctccgaggatatccctgct
tccctcgcagaagccgagaaattgttgagtcaacatcaaggtatccgcgaggagattgat
aactacaccgatgattattcacgtatgatggattacggtgagcgcatcactgccgaagag
acgacatcggacgacccgcaatacatgttcttgcgagagcgactcaaggccctgcgtgac
ggctgggaggaattgcatcaaatgtgggagaaccgccagcaattgctctctcagtccctc
aacctgcaaatgttcttgcgagatgccaaacaagcggaagttcttctcgctcaccaagaa
cacgttctctccaaggatgaaatgccagccaatttggaacaagcagagaatgccattaag
cgccacgaagcattccttaccacaatggacgccaacgacgataaggtcaacaacgtaatc
cagtttgctcagcgtttggaagacgagggccactttgcagccgacaaggcccaacgaaaa
gcagaaaacattagtgaacgtcgcgaggctaaccgccagagagccgttcaacttatggag
aagctgcgtgacgccctccaacttcaacagttcttgcaagactgcgaagagctttccgaa
tggatccaagaaaagaacataattgcccaggacgagacttatcgcagcgctaaaacagtt
cactccaagtggactcgtcaccaggcttttgaggctgaaatagcttcaaacaaagaccga
ctctaccatatccagcaggctggggagcaattgattactgaaaagccagaaattatttca
accattgatccgcgtatccaggaattgagtcaccagtttgatgacctcgagaggacaaca
cgcgaaaagggtgaacgcttattcgacgctaataggcaagtcctttacgagcaaacctgc
gatgacatcgatacctggatgtctgacctggagaaacagatggtgactggaggcactggc
gaggacttggcctctgtcaacatcttgatgcagaagcagcagatgattgaaacgcagatg
gcaatcaaagcccagcaagtgtctgaattgggcgcacaggccgagtatttggagcgcatg
acgcccgagaaggtggaagacattcaacagaagaaggaagctgtcgaaagaagattcgat
gagctgaaagcaccactggtcagacgccaacgcgatttggaaaagaagaaggaagcatac
caattccgtcgcgacgtcgaggacgagaagctctggatctcagataaaatgccgttggcc
actgccagcgacaatggcaattcactcttcaacgtcaacgtcttgaaaaagaagaaccag
tcactgagaacagaaatcgacaaccatgaacagcgcattcacttggtatgcaacaacgga
cagaaattgatcgacgaagatcacgccgattctgaagagttctccaacctcatcgaagaa
ttgctcgatacttggcagacactgaaagacgccatggataatcgacgagccaaactgttg
gcttctgaacgtgcccagcagtactttttcgatgccagtgaggccgagtcatggatgagc
gaacaggaactgtacatgatggtggaagatcgcggaaaagatgaaatttcagcccagaac
ttgatgaagaaacatcaaactttggaactggccgtggaagactacgccgagaccatccgc
tctcttggagagacatccacccagcttatcgctgaaggacatccagacagtgaccagatt
gccgttcgacaagcccaggttgacaaattgtacgctggtcttcgcgatctggctcaagaa
cgccgtgccaagttggaagaagctttgcagctctttatgcttagccgcgaagtcgacgat
ctccgccaatggatcgctgatcgtgaagtcgttgccggctctcacgaactcggtcaggat
tacgatcacgtcacacttctctgggaacgcttcaaggaatttgcccgagacactgaaacg
atcggcactgaacgagtggcagccgtcaacgagatcgctgatcagctgatgggtgcccgt
cactctgacgccgctactatcgccgaatggaaggatgatctgaacgaagcctgggctgat
ctcctggaattgattgatacgagaacgcaaatgttggctgcctcacgcgaactgcacaag
ttcttccatgattgcaaagacgtgctgggccgcatcgtcgagaaacaaaacacactttct
gatgagttgggaagagatgcaggatccgtgtccgcactccagagaaaacaccagaatttc
atccaggatcttcagacgttacagagtcaagtccagggtgtccaggaagattcacagcga
ctccaaacagcttacgccggagacaaagctcgtgaaatcactggtcgtgaaggtgaagtt
gtcaatgcctggctacagttgcaagccttatgcgaaggccgacgccagaaattagccgac
accggagacctcttccgattcttctccatggtacgcactcttgttttgtggatcgaagac
ctcatccgacagatgaacacaacagaaaaaccacgcgatgtgagcggtgttgaactattg
atgaacaatcaccagagtctcaaggctgaaatcgacgcaagaggagacaatttttcagcc
tgcattgctcttggcaaagaacttttatccagagggcactatgccaccaacgagatcaaa
gagaaacttgtagccctcaccaaccaacgcaactccatgttacatcgatgggaggaacgt
tgggaacacctccagctcattttggaagtctaccaattcgcccgcgacgccgccgttgct
gaaggatggttgatggcgcaagaatcctacctgatgagtcatgaattaggacacaccata
gacgaagtagaaaatttgataaagaaacacgaggcgtttgaaaagtctgctgctgcccaa
gaagaacgttttgctgccctagaaagattgacaacgatggaatggagtttgcatggtgat
ggtgttcgcgctcgttctcgtgagtgggtcgtgaatcgtcctagttggcatcccggttac
tttcatcctacatcctttgttgtggattcgccatacagaaatttacttcgctctattagt
gaccaaacacctagtccaacttgcatcaaggaactcttcgacgagtcagcatccaacaag
gaagatgaccgccttttcatttctaacaattcctccgcctcctcgtctccccatttatcc
cgcctttctcattccacctgcgtttcggactcgtccgtctcttcatctgacgcctcggct
tccggcgacaaattaaaaaagcgccgtaaatacttgaaaaagaggagcattaaacgacgg
aacacgagtcagtccttcaaaagcccccaagaaggatgcagtggcaaagcagaatcgccc
agtgctgtctattgcgaagaatggattttcagtaacgccaaccaccagccagatttaagc
aaacgacttacttttgctggattgagtgactttgagcaaaagaaagtttctgattccctt
gaattgagaagaaaaagccttgaaaatgacctgtccaagagtcctaagaagaattcgagt
tggttaaatatctggcaaaatatattgcgaatcagtccgaaagcaaaaagtaaaccccaa
gaaccagtcaacattgaaattcgtccaatggtcggccgagtctctgctctaccttccatt
tctgaaggcggcttgtccgaaacccaatccgcccattccactccttccgtaacacaattt
tctgtagccctttcctctgcttctggtagtgtaactgcatgtaacgcacaatcttctaac
actactaatcacaagtacgaattgaaagaattgaaacgacgtcaagaagacgatgaacga
caaagggcagaagaattggctgctcaacaagctgctctggccgcacttcattctccaccc
gaaggatcacatcacgaccaaactgacggagacacgtcgccatccgagcctatatctggc
agtaccgataaggatcccacaacagaagccaccgaagggagagcttcacctaaagctgaa
caagctattaaaccggtgccagtgcatgccaaagttgaagcaacttcttcgccttcctat
tctgcttctggacagaccgtaccagtttcacctagtagcccaggagcttcgtcgacaacc
gcatcgtcaacgggtcgttcggccaggccgtcagatacgtcccgtacgcctacaaccacc
accagtccgccaaaaggcaaaggatctcgatcacgttccaagtcccccttccgctccttc
cgctggaaaaaatcatcgaaaagccagcttccgtctggcgttggaagcgtttcagatgac
gaagctgctgcttgcgatgatgaagaagagcgccgcagttctgtagctggtggagacgac
gtgtatgagggtacggttacccgcaaacacgaatgggaatcgactactaagaaagcatcc
agccgatcttgggacaaggtctatttgactctgcgccaaggagatttggctgtctacaaa
gatcaaaagactgctaggggtactcccgaagctcattatcgcaacgaaagtccgttggac
attcgcacggctgttgctgaagtggctgctgattacactaagaagagacacgtcttccgt
ctcaagttatccaacggtggcgagtatctattccaggctaaggatgacgaagaaatgaat
ggatgggtcaccaagctccaggcttctactaccgccgcagtcgagagtgcgagcgcagga
tcctcacgagctcagacgatgccggcacaggcaacaaaagatgagcccaagaaacgaagt
tttttcacactaaagaagaaataa
DBGET
integrated database retrieval system
