Daphnia pulicaria: 124345811
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Entry
124345811 CDS
T08670
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
dpz
Daphnia pulicaria
Pathway
dpz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124345811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124345811
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124345811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Utp12
Beta-prop_WDR5
WD40_Prp19
WDR55
Beta-prop_THOC3
WD40
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_1st
Beta-prop_ACSF4
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
124345811
NCBI-ProteinID:
XP_046654287
LinkDB
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Position
1:9701819..9704810
Genome browser
AA seq
673 aa
AA seq
DB search
MAARTSETAFSPNGQYFANVSTDSRLKIWECESGRPKQEFTPASHLSAACTCLVWAPPTK
QPEQIVNQKKKKRKSNGEERSGVAGSDIIALGTASGNILLYSLNRAELVQQLKGGHTGKI
RSLCFNSDGSSLFSAASDQKIVEWDPVEGVMKSHWKVEKIHVSRICMLQDDCTLVIAGRS
IQCWNVESRSIVATFTGHTTEITHLLPVYLPGTKVGYFLSAADGDRCISAWRFVGEEKNG
QSQASFTLQDDPYNFTVSKPVSDKDPVVLAAVTLTGILHIFEHHLNGRSKKPLQPVVKIH
IGSDVVGTASPLPVLSAYSCGDADGNCIIVYGSLVRPGFEKMCYRSQEGMAYIVRRDPAS
LDNSKFDTTSSALKLKTPILPADVKTLAPEYMVPMAASAEVGGVVAGRKRRTQNSESSSG
PVSAKDSLPMEQRLSALNLTKTVDAVAPPQADNMAQLLLQGLHSRDPKILQSVLDRGDVH
IIGNTIRRIPVQAVLPLILELTRMMQFRGHPNYSYAKWLRSLLEHHAGYLTSCPDLASVM
TPLLALMTARTSLFPKLSQLRGRLHLMLGELEHRSDKQDSTTTELPATALLVYREESSDE
ASEEGDWPLQSGSESEDQWDELSDYGESMDVNEVKGDSDQESDDEDNNEEIDEEVEEASD
NDIESVVENGLSD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcacctcagaaactgcgttttccccaaatggacaatactttgctaatgta
agcaccgacagccgattaaaaatatgggagtgtgaatccggaagaccaaagcaggaattt
acccccgcgtcgcacttatcagccgcttgcacgtgtctcgtttgggcaccccctaccaaa
cagccggaacagattgtgaaccagaagaaaaagaaacgtaaatcaaatggagaagagaga
tctggggtggctgggagtgatattattgctcttggtacagcctcaggaaatattcttcta
tatagtctcaatagagcagaattggtacaacagttgaagggaggccacacagggaaaata
cgctctttgtgttttaatagtgacggctcgtctcttttcagcgctgcatcggaccaaaaa
atcgttgaatgggatccggtggaaggtgttatgaaaagtcattggaaagtggaaaaaatc
cacgtttcccgaatttgtatgctgcaagatgattgcactcttgtaatagctggccgttca
attcaatgttggaatgtagaaagccgctcgattgtagccacattcaccggccacacaaca
gaaattactcatctgctacccgtgtatttaccaggcacaaaagttggatactttctaagc
gctgctgatggagaccgttgtatcagtgcatggagattcgtcggggaagagaaaaacggg
cagtctcaggcgtcgtttactttgcaagatgatccgtataattttaccgtttcaaaacct
gtttctgacaaggatccagtcgttttggcggcagtgacgctcacggggatccttcacatc
tttgagcatcatttaaatggacggtcaaagaagcctttgcaaccagttgttaagatccat
attggaagtgatgtagttggtaccgcaagtccacttcccgttttatctgcatattcgtgt
ggtgatgcagatggaaactgtatcattgtatacgggtcgcttgttcgacctggatttgaa
aagatgtgttaccgatcccaagaaggaatggcttatattgttcgaagagatccagcttct
ctggataattctaaatttgatactacgtcatcggctttgaaattgaaaactcccatattg
ccagctgatgttaaaaccttagctccagagtacatggtgccaatggcagcgtccgctgag
gtcggaggtgttgttgcaggaagaaagcggagaacgcaaaattcggagtcaagttctggt
ccggtttcggcaaaagattctcttccgatggaacagaggctttcagctttgaatcttacc
aagaccgtcgatgccgttgcccctccacaggccgataacatggcccaacttcttcttcag
gggctacacagtagggatccaaaaattttacagagtgtgttggatcgcggtgatgttcac
atcatcggcaacacgatccggcgaattccagtacaggccgttttgccacttatcctagaa
ctgacgcgtatgatgcaattcagagggcatcccaattattcttatgcaaagtggttgcga
tctttgttggaacatcacgctggatatttgacatcgtgtcctgatttggcgtcggttatg
acgccactcttagctttgatgactgcccgcacttcgctcttccctaagctttcgcagtta
cgtggtagactgcatctaatgttgggagaattggaacatcgaagcgataaacaagattct
acaactactgaactaccagctacagctcttcttgtgtacagagaagaatcgtccgacgaa
gcaagtgaagaaggagattggccactacaatctgggtctgaatcagaagatcaatgggat
gaattatctgattatggcgaaagtatggacgtgaacgaagtgaaaggtgacagtgatcaa
gaatctgacgatgaagacaataatgaggaaatcgacgaagaagtggaagaagcttcagat
aacgacattgaaagcgttgtagaaaatgggttgtcagattga
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