Daphnia pulicaria: 124348403
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Entry
124348403 CDS
T08670
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A-like
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124348403
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124348403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_11
Cons_hypoth95
Ubie_methyltran
Methyltransf_32
PrmA
Methyltransf_15
PCMT
Methyltransf_12
Methyltransf_23
Methyltransf_4
RRM_1
RrnaAD
AviRa
Met_10
DUF6094
Methyltransf_18
UPF0020
TPMT
N6_N4_Mtase
NodS
Motif
Other DBs
NCBI-GeneID:
124348403
NCBI-ProteinID:
XP_046654566
EnsemblRapid:
LOC124348403
LinkDB
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Position
7:complement(6146571..6149055)
Genome browser
AA seq
623 aa
AA seq
DB search
MEVENVIIKEEKSELVDENLSAEPESNCSSNNQEVTPSDAVKLENNENTSIEPELNPQQD
QDNGENGGSDVNLDPYAYLNRPEFCSENFKIEIMNLPKYYGAGHLKKFLQRQDINTNKMK
LMKGYVFASFRNEEERDKAMEKLKGIVYKGNTLDVKLAKPMQDPLIKKRKAEAEAEVDGE
KKARKELKTETLTITEQITKKTVPYAGKPYSEQLSLKKQDMLTVLKKLTKEVRNAHQKAG
HFIQSKKVAHGAICEFTEMIPSPVSEKYRNKCEFTVGVNPETDEITLGFRISTYKEGSYA
VGPVSHLAFISDAMREAVRVFEEYFRASGRKPYNPEDHSGFWRQVLVRTNLAGEVLAVVQ
VHPQNLSTEELDSVKSELKKVAEANKIISLYFEAVGPKKSGEDSPPERIMGSTHLVEKLC
GLEFSISPLAFFQVNTLAAEVLFNKIAEIAEIDSNTNILDVCCGTGTIGLSLAKKCRRVY
GVELVESAVEDAKSNASKNGITNCVFVAGKAEDEVNNLIDSIKQKDLEEGVEGGKIVAIL
DPPRAGLHKKCCQLLRSAERIERLIYISCNAQAAMKSFIDLCRAQSNAYGGIPFIPVKAM
AVDLFPDTPHCEFILVLERYRPT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggagaatgtaattatcaaggaggagaaatcagagttggtggatgaaaattta
tctgcagaaccagagtcaaattgcagttcaaataatcaagaagtaacaccttcagatgca
gtaaaacttgagaacaatgaaaatacatcaattgaaccagaattaaatccccaacaagat
caagacaatggtgaaaatggtggaagtgatgtaaacttggatccttatgcttatctgaat
cgtccagagttttgttctgaaaactttaaaattgaaatcatgaatctaccaaagtactat
ggtgctgggcacttgaaaaagtttctccaaaggcaagatatcaacacaaacaaaatgaaa
ctgatgaaaggatatgtgtttgcctcttttcgcaatgaagaagaacgagataaggccatg
gaaaaattgaaaggcattgtgtataaaggaaacactctggatgttaagttggcaaagcct
atgcaggatcctctcataaagaaaaggaaagctgaggctgaagctgaggttgatggagag
aaaaaagctagaaaagaactgaagactgagacacttacaatcactgagcaaatcacaaag
aaaactgtaccttatgctggcaagccatattcagaacagctttcactaaagaaacaagac
atgctaactgttttaaagaaactgacaaaagaagttcgaaatgcacatcagaaagcagga
catttcatccaaagcaaaaaggttgcacacggtgcgatttgtgaatttaccgaaatgatc
ccgtcgccagtcagtgaaaaatacaggaacaagtgtgaatttactgttggtgtgaaccca
gaaaccgatgaaattactttgggatttcgaataagcacgtataaagaaggttcctatgct
gttggacccgtttcccatttagcgttcatctccgacgcgatgagagaagctgttcgagtg
ttcgaagaatattttagggcttcaggtcgcaagccttacaatcctgaagatcactcaggc
ttctggcgacaagttcttgttcgcactaatttggctggagaagtgttagccgttgttcag
gtgcatccacaaaatctgtcgaccgaagagttggattcggtcaagagcgaattgaaaaaa
gttgcggaagccaacaagattatttctctctattttgaagccgttggaccgaaaaagtcg
ggggaggattcaccacccgagcgtataatgggcagcactcacttggttgaaaaattatgt
ggcctcgagttctcaatttctccacttgctttctttcaggtgaacacattggcggctgaa
gttcttttcaacaaaatagctgaaattgcagagatagacagtaacaccaatatcctcgac
gtgtgttgcggtacaggaactattggcctatcactagccaagaaatgtcgtcgcgtgtac
ggcgtagaattggtagaaagtgcagttgaggacgcaaaaagtaatgcttcaaagaatggc
atcacgaattgtgtattcgttgctggaaaagcagaagacgaagtaaataatctgatagat
agcataaagcaaaaggatttggaagaaggtgttgaaggtggcaagatcgtggcaattttg
gatcctccccgagctggactacataagaaatgctgtcaattactgcgcagtgctgaacgc
atagaaagattaatctacatttcgtgtaatgctcaggcagcgatgaaatcttttatcgac
ttgtgccgtgctcaatctaatgcgtatggcgggattcctttcattcctgtcaaagctatg
gcggtcgacctgttcccggatacgccacactgtgaatttattttggttttggagcgttat
cgacccacataa
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