Daphnia pulicaria: 124348495
Help
Entry
124348495 CDS
T08670
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124348495
03041 Spliceosome [BR:
dpz03041
]
124348495
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124348495
Spliceosome [BR:
dpz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124348495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
POPLD
RRM_3
RRM_MARF1
THOC2_N
Motif
Other DBs
NCBI-GeneID:
124348495
NCBI-ProteinID:
XP_046654675
LinkDB
All DBs
Position
7:complement(6074050..6134915)
Genome browser
AA seq
461 aa
AA seq
DB search
MLAAMSTLMMPAAAMTLAGHHNLHHHHPGAAAALAGALQHQHQHQPHHHHPHHHHHHHHH
QQQQQQQHQQHQQQQQQHQHQPKPADLLSISAAAAAAAASSGSHPAGAALPMAHLALKTA
SVNGHGGSGSSSSSASSGGGSAGSGTANGHCQNSNEHFHIFVGDLSPEIETHTLRDAFAA
FGEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPA
PKDGAFFSAGSKPMSYEEVFGQSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVF
KDKGYAFIRFASKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSANNAQLMTGGLGPT
NTQYPYGYNQGMSYWYPGGYPPQMQSQFVQGMQGYAAYGQFAGYQPGMGMQLPGGWQSVQ
AQAGAGQQMAAAAAAAAAAASQQGGMVASYPIQQFQDSNFI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgctatgtcgactctgatgatgccggccgccgccatgacgctggccggccat
cacaatctccatcatcaccatccgggggccgcggccgctctggccggcgccctacagcac
cagcaccaacaccagccgcatcaccaccatccgcatcaccaccaccatcaccaccatcac
cagcagcagcaacaacagcaacaccaacaacatcagcagcagcagcagcagcatcagcac
cagcccaagccggccgacttgctgagcatttcggcggccgcggcggccgccgccgcctcg
tctggatctcacccggccggagccgctctgcccatggctcacttggctctcaagacggcc
agcgtcaacggtcacggcgggagcggcagcagcagcagcagcgccagcagcggcggagga
agcgccggaagcgggacggccaacggccattgtcagaacagcaacgaacatttccacatt
ttcgtgggggacctgagcccggaaatcgagacgcacacgctccgcgacgccttcgccgct
ttcggagagatctcagactgccgtgtggtgcgagacccccagacgctcaaatccaaaggc
tacggattcgtttcattcgtcaagaagtcggacgctgagaacgccatcgccggaatgaac
ggacagtggctcggcactagggccatccgcaccaactgggccacccgtaaaccaccggcc
ccaaaagatggcgcgtttttctcagccggatccaaacccatgtcgtacgaggaagtcttt
ggccagtcatcctccaccaactgcaccgtctactgcggcaatttggcccagggatcgacc
gaggaggccctgcagaagattttcggaccctacggtcagatccaggagatccgggtcttc
aaggacaagggatacgcctttatcagattcgcgtcgaaagaatcggccacgcaagccatc
gtctcggtccacaataccgacctcaacggtcaaaatgtcaaatgctcctggggcaaggag
cccggagagccgggtagcgctaacaatgcccagctgatgacgggcggattgggaccgacc
aacacgcagtacccgtacggctacaaccagggcatgagctactggtacccgggcgggtac
ccgccgcagatgcagtcgcagtttgtgcaagggatgcagggctatgcggcctacggccag
tttgccggctaccagcccggcatgggcatgcagctgccgggcggctggcagagcgttcag
gctcaggccggagctggccagcagatggcagcggccgccgccgccgctgccgccgccgcc
tcccagcagggtggtatggtggcctcctaccccattcagcaattccaggattccaatttc
atttag
DBGET
integrated database retrieval system
