Daphnia pulicaria: 124348541
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Entry
124348541 CDS
T08670
Name
(RefSeq) LOW QUALITY PROTEIN: cohesin subunit SA-1-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124348541
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124348541
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
124348541
NCBI-ProteinID:
XP_046654728
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Position
7:complement(5932013..5935317)
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AA seq
720 aa
AA seq
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AAEFECSLSSNQAEKTTVPTLSVGHGQTPRSAHGQISVTPAGKKAPAVAANSQKLVSSPE
GTPTSTRPSLRRRGRSKKHSETEHVANVEDESDLFSIIRNGKSSLQHIVDEWIEQYKADR
DSGLNAIMQFFISASGCNGKIPSKIPSSMDHAVVTREMTKKFDEDSGEYPLVMSGPQWRK
FRSNFCDFVHTLVKQCQYSIIYEQYXDNVISLLTGLSDSQVRAFRHTATLAVMKLMTALV
DVALTVSVHLDNTSRQYEVERRKTQDKRASDRLVGLLAKHEELEENMHDIKNMLTYLFKS
VFVHRYRDIVPDIRAICMTEIGIWMKRFPQNFLDDSNLKYIGWNLHDKVADVRLKCLQAL
QPLYASQELKEKLELFTSKFKDRVVSMTLDKDYDVSVQAVRLVITMQKYHQEMLSDKDCE
SVYELVFSSHRALAQAAGEFLKERLFTLNATSHPALRTLRGKKRLPNTPLIRDLVQFFIE
SELHEHGAYLVDSLIDSNEIMKDWECMTDLLIEEPGPDEEPLDDQQETALIELMTCCIKQ
VATGEPPAGRGSMRKIPTVKETKQTQGHRVRLTEHFIPTLPLLLGKYMTDPEQVANLLSI
PQYFNMEIYTTSRQEKSLDSLLRLIQNIVERHTTTEVLEGCAKALEFSCDEDYAISSRCD
LTRNTLIDRLVKKCEQDYENYVTLMAGDEEPNKDAVFTLVLGLKKIALFSSHHNLGTWNL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gcagcagaatttgaatgttctctcagttcaaatcaggcggaaaaaaccacagtcccaact
ctttctgttgggcatggacagacacctcgaagtgctcatggtcaaatttcagttactcct
gctgggaagaaggcccctgcagttgctgcaaattctcagaaattagtatctagcccagaa
ggtacccccacatccacacgtccttctcttcgacgtagaggacggtcaaaaaaacattca
gagacggaacatgttgctaatgttgaagatgaaagcgatttatttagtattatcaggaat
ggcaaaagctccttacagcacattgtagatgaatggattgagcagtacaaggctgaccgt
gactcagggttgaacgctataatgcagttcttcattagtgcttcaggatgcaacgggaaa
ataccatctaaaataccaagtagcatggatcatgccgtagttacccgcgaaatgacaaaa
aagtttgatgaggatagtggagaatatccgttggtcatgtctggaccacaatggagaaaa
tttcgaagcaacttctgcgacttcgtacacacactcgtgaagcagtgccaatattccata
atttatgaacaatacnctgataacgtaatttcccttcttactggtctttctgattcacaa
gtccgagcgtttcgtcatactgccaccttagctgttatgaaattaatgactgccctggtt
gatgtggctctgactgtgtcggttcatcttgacaacacatctcgtcagtatgaagttgag
cgtcggaaaacacaggataaacgagccagtgatcgccttgtaggattgcttgccaaacac
gaagaacttgaagaaaacatgcatgacattaaaaacatgttgacttacttattcaagtcg
gtgtttgtccatcgttaccgagatatcgttcccgatattcgagccatttgtatgacggaa
ataggcatttggatgaaacggtttccccaaaattttcttgatgattctaacctgaagtat
attgggtggaatttgcacgacaaagttgccgatgttcgtttaaaatgtcttcaagctctc
caaccgctgtatgcttcacaagagcttaaagaaaaactggaactttttaccagcaaattt
aaggatcgtgtcgtttcgatgacgctagacaaagactatgatgtttcagtccaagctgtt
cgtttggttatcactatgcaaaagtatcaccaagaaatgttatcagacaaggattgtgag
tcagtttacgagttggtgttctcttctcatcgagctcttgcacaagctgccggcgaattc
cttaaagagcgactattcacacttaatgctaccagtcatccagctctacgtactctccgg
ggcaaaaagagactacctaacacacctctcattcgtgatttggttcaatttttcattgaa
tctgagttgcatgaacacggagcatatttggtcgactccttaatcgactcaaatgaaatt
atgaaagactgggagtgcatgacggatttgttaattgaagaacctgggccagacgaagag
cctttggacgatcagcaggaaacagctttgatcgagttgatgacatgctgcattaaacaa
gttgcgactggagaaccacctgcaggtcgagggtctatgagaaagattcctaccgtcaaa
gaaaccaaacaaacccaaggtcaccgtgtacgacttactgaacatttcataccaactctt
cctctgttactcgggaaatatatgactgatcccgaacaagttgcaaacctcttgtcaatc
cctcaatactttaatatggaaatctatactacctcacgtcaagagaagagtctagattcg
ttattgcgcttgatccagaatatagtagaaagacacaccacaacagaagtgctggaaggc
tgcgctaaagcgttggaattttcttgtgatgaagattacgccatatcttctcgatgtgat
ttaacaaggaacactttaattgatcgtctcgttaagaaatgcgaacaagattatgaaaat
tatgtaacactgatggctggcgacgaagagcccaacaaagatgcggtgtttacgctggta
ttgggtttgaaaaaaattgccttattctcgtcacatcacaatcttgggacatggaatttg
tag
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