Daphnia pulicaria: 124348592
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Entry
124348592 CDS
T08670
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
dpz
Daphnia pulicaria
Pathway
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124348592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124348592
Spliceosome [BR:
dpz03041
]
Complex C
Other components
Step II factors
124348592
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Trp_ring
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
124348592
NCBI-ProteinID:
XP_046654766
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Position
7:complement(8569546..8571962)
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AA seq
600 aa
AA seq
DB search
MANTPSLPVSLLIASKSQSVGSEPQKKTREDWRKAKELEEARKAGTAPAAVDEEGKDINP
HIPQYISSAPWYYNTVGPTLKHQRPQEDDKQKQLAKVGDWFQRGVNLDSLTTKFRKGACE
NCGAVTHKKKDCMERPRKVLAKFSGAEIAPDEFIQPDLKLDFDGKRDRWNGYNPTEHLGI
IEEFEKVEDTKRQLKAQRLNTGDEDEGGEEEMDGDEDKYVDEVDMPGTKVDSKQRITVRN
LRIREDTAKYLRNLDPNSAYYDPKTRSMRENPYKDTGKEAEQVDYAGENFIRFSGDTSKH
AQAQLFAWEAQHAGVDVHLLAEPTKAEKLKVEYVGKKEEIKSSIQESILERYGGKEHLQV
PPKALLLAQTEQYVEYSRAGKIIKGAEKPVVSSRYEEDVYINNHQSVWGSYWKDGQWGFQ
CCYSMIKNSYCTGERSKDIEEEKIPSSTVAINANKIVTQDSDDGNTDSHDDSQEEKFEEK
QLPPPEVVKDTKDYEKSEARRKKKRDKKKKKKSHKKSVGKKGDTHESSDSESDEEAEKKK
KLLEALQAEEKRLRQVDRLMSLDERKRPYNSMVESKAPNEEELEAYYMKRKREEDPMAFF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacactccaagtttaccagtttcgctgctaatagctagcaaatctcagtctgta
ggtagtgaacctcaaaagaaaactcgagaagactggagaaaggcaaaagagctagaagaa
gccaggaaagcaggaactgcaccagctgcagtagatgaagaaggcaaagatatcaatcct
cacattccgcagtatatttcttcagcgccatggtattacaacactgttggaccaacacta
aaacatcaaagacctcaagaggatgataaacaaaaacagttggccaaagttggtgattgg
tttcagcggggggtgaatcttgattcccttacaaccaaattccgaaaaggagcttgtgaa
aactgtggagcagtgactcataagaaaaaagattgtatggaaagaccaaggaaagtattg
gcaaaattctctggtgcagaaatagccccagatgagtttatccaacctgatcttaaactt
gactttgatggaaaacgtgaccgttggaatggctataatccaactgaacatttgggcatt
atagaagaatttgaaaaagttgaagacactaagcgccaactgaaagctcagaggctaaat
actggagatgaagatgaaggaggagaagaagaaatggatggtgatgaagataaatatgtt
gatgaagttgacatgcctggaacaaaagtggattctaagcagagaattacagttcgtaat
ctaaggattcgtgaagatactgccaaatatttacgaaatctggatcctaattcagcctac
tatgatccaaaaactcgttcaatgagggaaaacccctataaagatactggaaaagaagct
gaacaggttgactatgctggtgaaaatttcattcgttttagtggggacacttcaaaacat
gcacaggctcaattgtttgcatgggaagctcaacatgccggtgttgacgtacatttatta
gctgaacccaccaaggctgagaaacttaaagtcgagtatgttgggaagaaagaagaaatc
aaaagctccattcaagagagtatcttagaacgttatggtggtaaagaacatctgcaagtt
ccacccaaagcactcctacttgctcaaaccgaacaatacgtggagtactctcgagctgga
aaaattatcaaaggggctgaaaaaccagttgtaagctcccgctatgaagaagatgtgtac
ataaataaccatcaatcggtttggggctcttattggaaggatggtcaatggggattccag
tgctgttattctatgataaagaactcgtattgcaccggtgagagaagcaaagatatcgaa
gaagaaaaaatcccgtcttcgactgttgctataaatgcaaacaaaattgtgacacaagat
tcggatgacgggaacacagacagccatgacgatagccaagaagaaaaatttgaggaaaag
cagttgcctccaccagaagtcgtcaaagacacaaaagactacgaaaaatcggaagccaga
aggaaaaagaagagagataagaagaagaaaaagaaatcacacaaaaaatcagttgggaaa
aagggtgacacccatgaaagcagcgactcggaaagtgatgaagaagccgagaaaaagaaa
aagttgcttgaagctcttcaagctgaagaaaagcgtctccggcaagttgaccgtcttatg
agtttggacgaaaggaaacgaccttacaatagtatggtggaaagtaaagcgccgaacgag
gaggaactagaagcctattacatgaagcgtaaacgagaagaagatccaatggctttcttt
taa
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