Daphnia pulicaria: 124348825
Help
Entry
124348825 CDS
T08670
Name
(RefSeq) ATP-binding cassette sub-family A member 7-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz02010
ABC transporters
dpz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124348825
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124348825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dpz02000
]
124348825
Transporters [BR:
dpz02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124348825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
124348825
NCBI-ProteinID:
XP_046655075
LinkDB
All DBs
Position
7:18566762..18587458
Genome browser
AA seq
2227 aa
AA seq
DB search
MGMFWVQLKQLMWKNLLIRKRSKVRVATELVWPVILFVILALVRTKGLKEYKNECFLEER
ALPSAGPLIFLQSLICTFDNNCHSSPASANRLIDEFEFDNVQGLIRDLTNISKRRITDEE
VAKGSGVAIDVTAGVAFAFKTISSGSSPKTSFPFKNVISRDAFQRLVSSKNASQTSALFE
SIVHIPPPELSKDVLRYHIENPRQVFCNTSLLKSWVTTPDESTLQTLSQVFCQSTAAEII
SVLNGTLLVNQVQRIVEENIEQPLHLEDWANLGRLLNTILSDISDLDSLSMIVKKFSSTT
LGKLAEQLWRSRNNEPGNATSTMSFLNSTASILCGKNTLIRERKPSDFPDGPESFQIGRL
SKSQSKTVTRSDLTPPCLQLFIGLQQNPLTRMILELFYPFIRGKLIYAPKNTAFDRVISH
VNETFQDLRIVQRFAGRWLEEISPALRRFLNQLDPTTIANVSEIIKERFPGLSNVTSFPT
NMSNQIISIKESLVKLDLVANLVNTYVECYEFDKFEGYATEEEAVERGMNLTDTGGLWAV
IVFKAQNNNLTSQDLPHNITYKLRMDSSKIDSTKRLRDFFETPLPRTNPTKYMKYFTSGY
IFLQDKIEQAIIKLQSNRSQLPGMYMQQFPSPCYTFDTFFLAIAGLFPLFMVLSFVYTCA
MIVKSIVREKERRLKETMKTMGLGNAVHWVAWFIDSMSFMLISCFLLSMILVFGGILENS
NFLIVFIFVLSFSIATICFSFLVSTFFSRANLAAACGGFFFFACFLPYNFFNLNGQDYSL
AILILASLMSDVSFGIGCFYFASHEQSGEGAQWSNIATSPKDGDAYSLLGCILMMLFDAV
LYLILTWYVETVFPGQYGIPKPWYFMFQPSYWCSIKRRNSIAGGLPSSHDAVTDLIEEES
RDLMVGVSIRDLGKIYSNGKVALRNLHIDFYEDQITSFLGHNGAGKTTTISILTGLFPPS
SGTATINGLDIRYQMDDIRRQLGVCPQHNVLFDQLTVEEHLRFYANLKTGEQIESRKEID
KMIEDLGLSHKKHDISEHLSGGMKRKLSIGSAFIGNSKTVILDEPTAGVDPYSRRSIWDI
LLKYKTGRTIILTTHFMDEADLLGDRIAIISQGQLKCCGSSLFLKQKLGSGYYLTVVRKD
ESERNVLVKGDGQGNADPVSQRANETDKIVNVVKQHIPNVNIVENVGSDIVFCLPEFDEA
GIRQRDKFPILFDELDLKLEELRVDSYGINDTTLEEIFLKVANDPSEESFEPKVEPEQVL
AVASGEQSIFTSLRRIRSRESVYEEVPQTEENVTSDTFSLLSSEKLTGAVLICQQFFALY
VKRFCNSKRNLKGFFCEIVLPALLIIINQLTTMQLSAISPEPSIELSPWLYGSSNVAFYA
NANPNEIWNNRYIKNMLNETGMGTRCQNNVTSFQCNSNTTGLLNPFVNPDDYVDFQCPCN
MGVAFCPANLTAATLLHRYKSVSTDDFYDVTGKDMAMWIVRTYKTYKKFRSGGFEFGLQN
PFEGINLTLFSKDVQDLMESMRFPLPLQLNASGEILNFENITRLSGTFDKVKVWYDNKAW
ASSVSYLNAINNVILRSSLPTSKTNYSITAINHPMNYSTKQLEDRFMKQVGISVLHAISV
IFAMSFVPASFVIFLVEERKSKTKHLQFISGVKPITFWVASYTWDMMNYLIPSALVIFIF
IGFDQQAYIGPKNIAGMILLLILYGLSAIALMYPASLVFSVPSSAFVGLACGNLFIGVIT
TISSFVLQLFDDAQLKLIGSILNEVYLIFPHYCLGRGMIDMAQEHYKTQRLELLGLDYPR
NIFEWDYLGRYFLSMVLQAVVFFSFTVLLHYQVLPESVVRYFQRTQLQPLPLEDEDVARE
RERVEQIDDESTDELRLLRLTKVYGRGKEPATNRLSFGLKKGECFGLLGVNGAGKSTTFK
MLTGDETVTSGNAFVGGFSILSNLTEAQQNLGYCPQEDALLSLLTGAEHLKLFARLRGVP
QKHMDKVVNESLKKLGLLPYKNRCAGTYSGGNKRKLSTAIAFIGNPAVVFLDEPSSGMDP
KARRSLWSAIIDALKGSRSILLTSHSMEECQVLCTRLAIMVNGTLRCLGSAQHLKNRFGN
GYMISARCEMEYVSDVLQSVQSVIPEARLRERRSRQLIWHIQPNVLSIASLFNRMEAARA
ATQMVDYSITQTTLDDVFLRFARLQRETNEESDDNNEQGLEDVPLHSRTSHGLTNQDQFA
VSINTAF
NT seq
6684 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgttttgggtgcagttgaaacagttgatgtggaaaaacttattgattagaaag
agatcaaaggttagagttgctaccgaacttgtttggccagtcattttgtttgtaatttta
gcacttgttaggaccaaaggtttaaaggaatacaagaatgaatgttttcttgaagaaaga
gctttaccgtcagctggccctttgatctttctgcaaagcttaatttgcacatttgataat
aattgccacagttccccagcatcagctaatcgtctgattgatgagtttgaatttgacaat
gttcaagggctaattcgggatttgacaaacatttctaagaggaggattactgatgaggaa
gttgccaaaggatctggagttgcaattgatgttacagctggtgttgcatttgccttcaag
acaattagcagcggatctagcccgaaaacttcatttccctttaagaatgtcattagtcgc
gatgcttttcagcgactcgtaagctcaaaaaatgcctcgcaaacatcagcattatttgag
tctatcgttcacattccaccgccggaactatcaaaggatgtgctgagatatcacatagaa
aatccccgtcaagtgttttgtaacacttcgcttttgaaatcatgggtaaccactccggac
gagtcgactctgcaaactctaagccaagttttttgtcagtctactgctgctgagattatt
agcgttctcaatgggactttgctagtcaaccaagtccaacgtatcgtggaggaaaatata
gagcagccattacacctggaagactgggcaaatcttggtcgtcttctaaatacgattctt
tcagacatcagcgatttagattctctttccatgatagtcaaaaaattttccagtacaacg
cttggaaaattagctgagcagttgtggagatcaagaaacaatgaacctggaaacgcaaca
tcgactatgtcgtttctcaactcaactgcgagtattctgtgtggaaagaatacgttgatc
agagaaaggaaaccttccgactttccagatggaccagagtccttccaaataggaagactc
tccaaatcccagtctaaaaccgtaacacgctctgatctcacgcctccttgcctgcagctt
tttataggcttacagcagaatccattgactcgtatgattctcgaacttttttatccattt
attcgagggaagcttatttatgcgcccaagaatactgcgtttgaccgcgtgattagtcat
gtcaatgaaacattccaagatttaaggattgtacagcgttttgcgggcagatggctggaa
gaaatttcacctgcacttagacgttttctgaatcaactggatccaacaaccattgcaaat
gtatcagaaattatcaaggaacgtttccctggactaagtaatgtaacttcgttcccaacg
aacatgtccaatcaaatcatcagtattaaggaaagtttggtgaagctcgatcttgtcgca
aatttggtcaatacttatgtggaatgttacgaattcgacaaatttgagggatatgccact
gaagaagaagccgtcgagcgtggcatgaatttaacagacaccggtggattgtgggcagtg
attgtttttaaagctcaaaacaataacctcacatcacaggatctacctcacaacatcact
tacaaattacgtatggacagctctaaaatcgatagcacaaagagattgcgagatttcttc
gaaacaccactgccccggacaaatcccacaaagtacatgaagtatttcacttctggctac
attttcctacaggacaaaatagaacaagctataatcaagctgcaatcgaatcgatcccaa
ctgcctggaatgtacatgcaacaattcccaagtccctgttacactttcgacacctttttc
ttggcaattgcgggtcttttcccgctttttatggtgttatctttcgtttacacctgcgcc
atgattgtcaagtcaattgttcgcgaaaaagagcggcgcctcaaagaaacgatgaaaact
atgggactaggaaacgctgttcattgggtagcctggtttatcgatagcatgtcgtttatg
ctaatttcctgttttcttctctccatgatcctagtgtttggaggaattttggagaattca
aatttccttatagtattcattttcgtcctcagtttcagcattgccaccatttgcttcagt
tttctagtctcgacgttctttagccgagcgaatctggctgctgcttgtggtgggttcttt
ttcttcgcttgttttctcccctacaattttttcaacttgaatggtcaagattacagcctc
gccatcttgatacttgcgagtttgatgagtgacgtgtcttttggaatcgggtgcttttat
tttgcaagtcacgagcaaagtggagaaggtgcacaatggagcaatatagctacaagccct
aaagacggcgatgcgtattcgctattgggatgtattttgatgatgctatttgacgctgtt
ctctacttaatattgacttggtacgtcgagaccgtctttccaggtcaatatggtattcca
aaaccatggtatttcatgtttcaaccatcctactggtgttcaattaagcgcagaaacagt
attgccggaggccttccatcaagtcatgacgcagtcacggatttaattgaagaagagtcc
agagacttgatggtaggagtgagcatccgtgatctagggaaaatatattctaacggaaaa
gttgctctccgaaatctgcacatcgatttttatgaagatcaaataacttcttttttggga
cacaatggagctgggaaaaccacaaccatctctattctgaccggactgtttcccccgtca
agtggaacagctacaatcaacgggttggatattcgttaccaaatggatgatatccgccgt
cagcttggcgtgtgtcctcagcacaatgtcctcttcgatcaactaactgtggaagaacat
ttgcgcttctatgcaaatctaaaaacaggggaacaaatcgaatcacgaaaagaaattgac
aaaatgattgaagatttagggctgtcgcataaaaagcacgatatttccgaacacctttcc
ggcggaatgaaaaggaaactatcaatcggctcagcttttataggaaattcaaaaacggtg
atcttggacgaaccaacagcgggagtcgatccatactctcgacgatcaatttgggacatt
ctcctaaaatataaaacaggtcgaactattattttgactactcactttatggatgaagcg
gacttgttgggagatcgtatagctattatttcccaagggcaattgaaatgttgtggctct
tccctttttctaaagcagaaactaggatccggctattatcttacggtcgtaagaaaagac
gagagtgagcgcaatgtcctagtgaaaggcgacggccaaggaaatgcagatcctgtttca
caaagagcaaatgaaaccgataaaattgtgaatgtagtgaaacaacacatcccaaacgta
aatattgtagagaatgtagggtctgacatcgtattctgccttcctgaatttgatgaagca
ggaatccgccagagagacaagtttcccattctttttgatgagctcgacttaaaactggaa
gagcttcgtgttgatagctatggaattaacgatacgacgcttgaagagatatttctaaag
gttgccaatgacccctcagaagaaagttttgaacccaaagtagaaccggaacaagttctt
gcagttgcgtccggtgaacagtccatttttacttctttgcgaagaataagatcccgggaa
tctgtatacgaggaagtgcctcaaactgaagagaatgttacttctgatacattcagtctt
ctctcttctgagaaattgacgggtgcggtactgatttgtcagcaattttttgcgttgtac
gtcaaaagattctgcaactctaaacggaacttgaaaggatttttttgcgagattgttttg
cctgcgttattaattattattaatcaattaacaaccatgcaactaagtgcaatttctccg
gagccttctattgaactttccccgtggctttacggaagttcaaacgttgctttctacgca
aatgccaatcccaatgaaatttggaataaccgttacataaagaacatgttgaatgaaacc
ggtatgggtacaagatgccaaaacaacgtgacgagttttcagtgtaatagtaacacaacc
ggactacttaatccctttgtcaatcctgacgattacgttgactttcaatgtccgtgtaac
atgggtgttgctttttgccccgcaaatttaaccgcggcgactctgcttcacagatacaaa
tctgtttcaactgacgatttttatgatgtaacgggaaaggacatggcaatgtggatagtt
cgaacctacaagacatataaaaagttcaggagtggagggtttgaattcggcttgcaaaac
cctttcgaaggtataaacttgacattattttcgaaagatgtgcaagaccttatggaatca
atgagatttccattaccacttcagttgaacgcttctggtgaaattttgaattttgaaaat
attactcgtttaagtggtacttttgataaagtgaaggtttggtatgataacaaagcttgg
gcttcgtcagtttcgtatttgaatgccatcaacaacgttattttacgttcatcattgcca
acatcaaaaacaaattatagcattacagcaattaatcatcctatgaactattcaactaag
caactagaagatagattcatgaaacaagttggtattagcgtattgcacgcaatatcagtc
atttttgctatgagttttgtacccgcatcatttgtcatcttcttggtggaagaacggaag
tctaaaaccaagcatctgcagtttatatctggagtgaaacccataacattctgggttgcg
tcttacacttgggatatgatgaattatttgatacctagcgcattagttatcttcatattc
attggattcgatcagcaagcttacattggccctaagaatatcgcaggaatgattctgcta
ttgatcctctacggattatcagctatcgctctcatgtatccggctagtttggttttttcg
gtccctagttctgcctttgtcggtttggcgtgtggtaatttattcatcggagtcatcacc
acgatttcctctttcgttcttcaacttttcgacgacgcacaattgaaattgattggaagt
attcttaacgaagtttatttaatatttcctcactactgcctcggtcgtggaatgattgac
atggcgcaagaacattataaaacccaaagacttgagcttcttggacttgattacccgcga
aatatcttcgagtgggattaccttggccgctactttctttccatggttcttcaggctgta
gttttcttcagtttcactgtgctcttgcattatcaagtgctcccggaaagtgtcgtgcgc
tactttcagagaacacaacttcaaccactacccctggaagatgaagatgttgctcgtgaa
cgtgagcgcgttgagcagatcgatgatgagtcaactgatgaacttcgcttactacgactt
acaaaagtatacggccgaggtaaagagccagccacgaataggttgtctttcggcttgaag
aagggcgagtgtttcggcttacttggagtcaatggtgctggcaaatctacaaccttcaaa
atgttgacaggagacgagacggttactagcggtaatgcgtttgttggcggctttagcatt
ttgtcgaacttgacagaagcgcaacaaaatttaggatattgcccgcaagaagatgcactc
ttgtcactccttactggcgcagaacacttgaagttgtttgcaagactccgtggagttccc
caaaagcacatggacaaggtcgtcaatgaaagcttaaagaaactaggacttcttccttat
aaaaatcgatgtgctgggacatactccgggggcaacaaaaggaaactgtcaacagctatt
gcctttattggcaatcccgccgttgtattcttggatgaaccatcgagtggcatggatccg
aaagcacgtcgctcattgtggtcagctattatcgacgcgctgaaaggttcacgttccatc
ctgttgacttcccactcgatggaagagtgtcaggttctgtgtactcgtctagcaatcatg
gtcaacggaacgctacgctgtcttggttctgctcaacacctgaaaaacagatttggcaat
ggatacatgatcagtgctcgctgtgaaatggagtatgtcagcgatgtcctacaaagtgtc
caatcggtcatacctgaagcacgtttgcgtgagcgacgatcccgccagctgatttggcac
attcaaccaaacgttctttccatagcatctttattcaacagaatggaagcggcaagggca
gcaactcaaatggtggattattcaatcacacaaaccacgttggatgatgtattccttcga
tttgcccgtcttcagagggaaactaatgaggagtctgacgataataatgagcaagggtta
gaagatgtgcctctgcattctcggactagtcatggcctaactaatcaagatcagttcgcc
gtttcaatcaacactgcgttctga
DBGET
integrated database retrieval system
