Daphnia pulicaria: 124348858
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Entry
124348858 CDS
T08670
Name
(RefSeq) calsyntenin-1-like
KO
K22659
calsyntenin 1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dpz04515
]
124348858
Cell adhesion molecules [BR:
dpz04515
]
Cadherins
Cadherin related
124348858
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Laminin_G_2
Glyco_hydro_16
Rhabdo_ncap
PAP1
TMEM51
Motif
Other DBs
NCBI-GeneID:
124348858
NCBI-ProteinID:
XP_046655157
LinkDB
All DBs
Position
7:complement(16603545..16624339)
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AA seq
1006 aa
AA seq
DB search
MAGWPTLVVVGVALALFAAVSNAETQVPRLDGAGRSVGGNSGYHGLVDEDKLIVDVTPKI
RASGAEICAFRIVNKHHGETPFEIVVKDREKGEAELRAKKSLNCEKKKNYKFDIVAVSCA
GISSENATVHISVNDVNEYAPKFNQPSYVVDVDEGRPVDKILQVEANDADCSAKYGDICR
YDILNKDQPFAIDNEGVIRNTEPLDYEKNHNHILQVVAFDCGMKRSEPVLVSVKVNRVCR
LGWTGISERVEYVPGSGRQDLFPEALINLCDFPCQPESIQARLTLASSHLGKNCDRDTYT
IQNQRKLCGANSRAIDLLPPPGPGAEWTRDLPVDQGREADQVFVFDGATGVTVPPEVMSH
NLTRNFTMSVWLKHDHHAGQDKHVKEHILCNADDHQMNRHHFSLFIRNCRLILLLRREFG
DGDLKSFRPAEFRWKLPQVCDGQWHHYAVSMEFPEVQLYVDGRPMVASKNNPEIIDDWPL
HNSHGLNTTLTVGACWQGSQSRMQHFMHGSMAGLSILAGQTELDEVIACFHKCKENLEAP
PMELLQPGMEILNNNDLTELTLEGENKTNLEVLLRKVAYANLRDFPTPGRRPLRLYTNII
CSSGRTLKIPVIESAIVVQATPLPIVTVTGLSSSHYGYESLRGGVHLFPDARIEVSNADA
AAAADQDSSSEEDESSEEEDLLMNIAQRVDSCTATVYPPLNPDHETLTWPQNLLNQFKIE
AKFSHDGVTLMGSESTNHYEQILHQLQYNNHKPAFYLTRAFKLICSQMSGRFASNELVHT
VTVDHPQASSFIDGSTSTLVAASTTSAASSSSSAGHSTEPSTSAPQPPSQQMSMHQSKTA
APAHAKIDRHHVDIRPVGPITSISDVYMGMGGTVQGHLSNGASHTVTIIVMVCAGFLLLM
ISLGVVRVRAARRRAQQDETTADTEMAWDDSALTITVNPMETLEAAEKSTMTRTSLRHDD
SDSEDDSCHGNDSSDEDPDDEDDDDDDDGGVCKARDLEWDNSTLSI
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggctggctggccgacgctcgttgttgttggtgtggccttggctttgttcgccgcagtg
tcgaatgccgaaactcaagttccccgtttggatggagccggcagaagtgtcggtgggaac
agcggctaccatggactcgtcgacgaagataaactgattgtggatgtgacaccgaaaatc
agggccagtggcgctgaaatttgcgccttccgcatcgtcaacaaacatcacggagagacc
ccattcgagattgtggtgaaggatcgagagaagggcgaagctgaactgcgggccaaaaag
agtctcaattgtgagaagaagaaaaactacaagttcgacattgttgccgtttcctgcgcc
ggaatctcatccgaaaacgccacggtccacatcagcgtcaatgacgtcaacgagtacgcg
ccgaaattcaaccagccgtcgtacgtcgtcgatgtagacgaaggtcgtcccgtcgataag
atcctccaagtggaagccaacgacgccgattgttcggccaagtacggcgacatttgccgc
tacgacatcctcaacaaagatcaaccatttgccatcgacaacgaaggtgttattcgtaac
acggagccgctggattatgaaaagaatcacaatcacatcctccaagttgttgcctttgat
tgcggaatgaaacgctccgaaccggtccttgtcagcgtcaaagtcaaccgcgtctgccgt
ctcggatggaccggcatcagcgaacgcgtcgagtatgttcccggctctggtcggcaggat
cttttccctgaggctctgatcaacttgtgcgatttcccttgccagccagaatccatccag
gcacgtcttactttggcttcctcccatctgggcaagaactgcgaccgcgatacctacacc
atccagaaccaaaggaaattgtgtggagccaatagccgggccatcgatctcctgccacca
ccaggaccaggagccgagtggactcgcgacctgcccgtcgaccaaggacgcgaagctgat
caggttttcgtgtttgacggtgcaacaggcgtgaccgtgccgccggaagtgatgtctcac
aacctgacgagaaatttcaccatgtccgtgtggctcaaacacgatcatcacgcaggacag
gacaaacacgtcaaagagcacattctctgcaatgcggatgatcaccaaatgaaccgccat
catttctccctgttcatccgcaactgccgactcattttacttctgcgccgtgagtttgga
gacggcgatctcaaaagtttccgcccggctgaattccgttggaaattgccccaggtttgc
gatggccagtggcatcactacgccgtgtctatggagttccccgaagttcagctctacgtc
gatggccgccctatggttgccagcaagaataaccctgaaattattgacgattggccgctt
cacaacagtcacggactcaacacaactctgacggtcggagcttgctggcaaggatcacag
agtcggatgcaacattttatgcacggatccatggctggtctgtccattctggccggccaa
acggaactcgacgaggtcattgcttgtttccacaaatgcaaagaaaacctggaagctcct
cccatggaactccttcaacccggcatggaaatcctcaacaacaacgatttgactgaattg
acgctggaaggcgaaaacaaaaccaacttggaagtgcttttgcgcaaagttgcctacgcc
aatttgagggactttcctacacctggccgccgtccacttcgcctctacacaaacattatc
tgctcttctggccggaccctcaagatccccgtcattgagagtgccatcgtcgtccaggcc
actccattgcctattgtaactgtcaccggactctcgagctctcactacggctacgaatcg
ctgcgtggtggcgtccatcttttccccgatgctcgcatcgaagtcagcaatgccgacgct
gccgctgccgccgatcaggactcttcgtcggaggaagacgagtcttccgaggaggaagat
ttgttgatgaacattgcccagcgcgtcgattcgtgcacggctacagtctacccgccgttg
aatcccgatcacgagacgctgacgtggccgcagaaccttctgaaccagtttaagattgag
gccaaattcagccacgacggtgtcacgttgatgggcagcgagtcgacaaaccactacgaa
cagatcctgcatcagctgcagtacaacaaccacaaacctgctttctacttgacacgagcc
ttcaaattgatctgttcgcagatgagcgggcgctttgccagcaacgaacttgtccacact
gtcaccgtcgatcaccctcaagcgtcatcatttattgatggatcgacatccaccctagtg
gctgcttcgacaacttcggctgcctcatccagctcgtctgctggccattcgaccgagccg
tccaccagcgctccgcaaccaccgagccaacagatgtcgatgcaccagagcaaaacggca
gccccggctcacgccaagattgaccggcaccacgtcgacatccgtcccgttggcccaatc
acctccatctcggatgtttacatgggaatgggtggcaccgttcagggccacctgtccaac
ggcgccagccacaccgtgacgatcatcgtgatggtttgcgctggtttcctccttttgatg
atcagcctgggagtggtgcgcgtccgtgccgctaggcgccgcgcccaacaagacgagacg
acagccgatactgaaatggcttgggacgactccgctctcaccatcaccgttaacccgatg
gagacgttggaggcggccgagaagtcgaccatgacacgaacttcgctccgtcatgacgat
tctgactctgaagatgacagttgccatggcaacgattcatcggacgaagacccagatgat
gaagatgatgacgacgatgacgacggaggagtttgcaaagcccgcgacctcgagtgggac
aattccactttgagtatctaa
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