Daphnia pulicaria: 124349271
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Entry
124349271 CDS
T08670
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124349271
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
124349271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12
CLN3
Motif
Other DBs
NCBI-GeneID:
124349271
NCBI-ProteinID:
XP_046655697
LinkDB
All DBs
Position
7:6582456..6591350
Genome browser
AA seq
2278 aa
AA seq
DB search
MACLSMENRPLKKLRLGPPDVYPQDPKQKEDELTPVNVKQGFSHTPNLNQSEEYGSAKNH
NFSLSKVQTFINGVLTKKQEINTLPDTGRKRQLINPKENFHNVTPKSKAFIESWFKDLAG
SKPLMNLGKRVPIFNKKEEIFIQLSEYQVPMSRAIWLIKMTSAYSVAISEAKMKKRQVPD
SSQEWTSTLVRFIKEQIVKLQDFYQKSTNSGGTSAAYASNATAYHNGSPLMSDEQKLALR
QFNYCQQLCKVMFEEGLLECQDFLQWQLDMLEKCKTCDDGLLKFIIPLILQYVDEFTQCE
ILSRKLVFQVCRRISPLLSNDQISEGSVSLDVGNCGQHRSVLIQMSAIIQAVVLHCPTAL
VWNHSGEGKISSHLVGSPLDHLPIPPSALPMAPRFSNDHVRQMLREAENAIKQRSKAAES
RWPLDKLVYHSEINCSVKQKQQNQPQTGIITARVLQALEALDLHSFDRVDLTNSIDSLYV
KIFPAIGGIKGNVDPATVEQIGQFAKQDEPFVRLLCQWAVSDQRYGEHRAIAAALLLEKR
QMDLVALTESDAVGGEDNDTDENLAAVSAVQPVYQGFLMKFLDSEAPVLNESSSGHNNRT
VFASLVHLYYELIKHDVFSHDMYMCTLISRGDLLSVTPGHSGATVAPSNSGHFAGTPSSG
MSSLTGFQCMNDLRCEMDDSKIDDDLGKLLQHIKEEQQIVMDTPDSPKDESHNTLESGRG
EKEGKRQSRHLLFTTHFPLPQDDSLIHDCNQRHILLYGVGKAREESRHAVKKVSKEMCRL
FHKKLAIDVQTEGTNLAGGVGAFVGSSKSRKHSSRLEFNFELSMQRFLSLSYFDRHAVAA
QAASTCMEMINSFTVGGAAYLPILEHISFLFDLFEVSLSISGLIDLCLQLLKELPEVELL
LSQRNSVLSRNYLTNVGLYIVGVLRRFHCCLLLSPESTAAAFESLCRIVKHVTNPADCSS
AERCILAYLYDLYSCCSFLKAKNGQLDSSLTSSNSSSSRGSSGVAMNTGSEVFAFSNAYP
KIKQTIFAPVVSLPKSVHPLNRDFLQDYITSPRRKPEPHILRQLSDSAQLRYSFVFNVVV
AVCNEADNDKLNDIALLCAELTAGCSALSAEWLGVLTSLCYSATAYIDVSTQVDVQDNSI
HHNLAVLFSVLLARHCFGLQDFLLYVGVPSLVKIWNEGGRSDTDPEAEAGARLTCHLVLR
LFKTSDAPHPACYSNSSHSVNASPHHTLQQTTPSSLGVKLACDRHLLAATHNSISVGPVL
AVLKAILVLADRVPPEGKSSRLTGSGSNINSSNRLGVGNSSMANEVSISHILGTSWSGDL
DLDFGSSNIGVGGGRNSFGGATENVPLASYARYVLRQICSQPWVHQRCLQNPEELLKLDG
LLDSCLSLRQAQRLLQMISRPDSGASVVEDISNEHQDYRQVVNRVLESLDQWRLRVAWLD
LQLLCQQLTSIGSGGASSTDMNQLLEAIARAVLDVFELSTTPGVKEEPDQSGGSSSLKKR
TEAAAATPSSSVSGSAIKSHPSLSISLIAPLVSKLPGTVQGRILKVASQVLESCNWGLVS
KGKDKERNIPNPTLAFRSKSLLSYEPLLSLVMTCLKGQDEQREMFLSSLHSQLSHFNFLP
KEDRLYQGEDIRARQAMLEALQLRFSLVGGLFDSILRNPMVAIDWAILLTQLVTNGVVDA
SNNTELFTTLQDMLATLLHSTLVTDGQSDRGEDSRKYYPILIKKLKKELAERKGSPSIQC
IKQLLPLPKLTSEFVTCEPYGTLTDTKGNKISGFDSNDKKQGHRLYEKQRVSPWEILEGH
KTAAPLSWAWFGAVRVERKPLRHQEVQRLLRHHTHALHKPASYYLEHPILPPEELEPPVV
EKIVPKEEVCFKMEIPSSDQSPRGVTKRGQKSNQRRPRGRRGAAAAAAAAAAAATVSQPT
VGGGYQSPVASGMYPPQPPPQWNNYTAPAPPASQQGTVPTPAAFFPQQTIGPRFPSERPG
TQSRQALSNMLRQRHTSTQFVPGSGANPAVANPTAVPSAPPTGAGGGAMPNNPRVAPGAV
AGGGANQQQFPNISMVDKQRQQQFMRQQMRQQHTGGNVFGQQGPQQAQPQQQQQQQQQQQ
QQQQQQQQQQQQQQQVQMAPGGFSNIHTPMNQNFGMFQSGTPGMQQLVNPQQQQAQSQPA
QQQPQQQGMMGQHFPQGAGNFPMQQTQPQGNMILMQQQHQQPQGRGMNATPMRPPFMQSA
GMQMNAAQPNQFVRGAMPNQQQAVRLQHQQMVAIQQQQQMQHNMGQQQQHNQHYHQPF
NT seq
6837 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtttgtcaatggaaaatcgtcctcttaaaaaattgagattaggaccgcccgat
gtttacccacaggatcccaaacaaaaagaggatgaactgactcctgtcaatgtgaaacaa
ggattttctcatacacccaatcttaatcagtctgaagagtatggatctgctaaaaatcac
aacttttctttatcaaaggtccaaacttttattaatggagtgcttacaaaaaaacaagaa
atcaacacattgcctgatactggccgaaaacgccaactcatcaatcccaaagaaaatttc
cataatgttactccaaagtccaaggcattcattgaatcttggttcaaagacttagcaggc
agcaaacctttgatgaatctaggaaaaagagtgccaatattcaacaagaaggaagaaata
tttatccaactaagtgaatatcaggttcctatgtctagagcaatatggttaatcaagatg
acatctgcgtattcagtggctatttctgaagccaaaatgaaaaagcgtcaagttccagat
tcctctcaagagtggacaagtacattggtccggttcataaaggaacaaattgtgaaacta
caagatttctatcaaaaatccacaaatagtggaggaacttctgcagcatatgcttcaaat
gctactgcatatcataatggtagccctttgatgagtgatgaacagaagcttgctcttcgc
caatttaattattgccagcaattatgcaaagtcatgtttgaggagggacttcttgaatgc
caagatttcttacaatggcagttggacatgcttgaaaaatgtaaaacttgtgatgatggt
cttctcaagtttattattccattaatcttgcagtatgtagatgaatttacacagtgtgaa
attctgagtcgaaagcttgtttttcaggtgtgtagaagaatttcaccgcttctatcgaac
gatcaaatcagcgaaggatcagtttcgttagatgtgggaaattgtgggcagcataggagt
gttcttattcaaatgtctgccatcattcaagcagtcgttcttcattgtccgacggcatta
gtttggaaccattccggagaaggaaaaatatcatctcatttggttggatcccctttagat
catttgcctattcctccatcagcattacctatggctcctcgtttttcaaacgatcacgtc
cgccagatgcttcgagaagctgagaatgccatcaaacagcgtagtaaggctgccgaatca
cgatggcctttagataaactggtttatcactccgaaatcaattgtagtgttaaacagaaa
caacaaaatcagccacagactgggattataacagcacgagtgcttcaggctctcgaagca
ttggatcttcatagtttcgaccgtgtagacttgaccaacagtatcgattcactgtacgtc
aaaatatttccggcaattgggggaatcaaaggaaatgttgatcctgcaactgtagagcaa
attggccaattcgccaaacaggatgaaccgtttgttcgcctgttgtgtcaatgggcagtt
agtgatcaacgatatggagaacaccgcgcgattgcagctgctctgcttctagaaaagaga
caaatggatttggtggctttaacagaaagtgatgctgttggaggcgaagacaatgatacc
gacgaaaatttggctgccgtttccgccgtccaacccgtttatcagggatttttaatgaaa
tttcttgactccgaagcaccagtgctcaatgaatcaagttccgggcacaacaatcgaaca
gtttttgcgtctttggttcatttatactatgaactcatcaagcatgacgtgttctctcat
gacatgtacatgtgtactctcatttcgcgaggtgatcttctctcagttacacctggccat
agtggagcaacggttgctccgtcaaattcgggtcattttgctggcactccaagcagtgga
atgagtagtttaacgggatttcaatgtatgaatgatttacgctgtgaaatggatgacagt
aaaatagacgacgatcttgggaagttgttgcaacatatcaaagaagaacaacaaattgtc
atggacacgcctgattctcccaaagatgaaagtcataacacacttgaatctggtcgagga
gagaaagagggtaaacgtcaatcaagacacctcctgtttaccactcattttcctttgcct
caggacgatagtttaatccacgactgcaatcaacgacacattctgctgtacggagttgga
aaagcacgcgaagaatctcgccatgctgttaaaaaagtctcaaaggaaatgtgtcgcctt
tttcacaagaagctagcgattgatgtccaaacggaagggacaaatctagctggaggagtc
ggagcctttgtaggttcttcgaaatcccgaaaacactcgtcgcgcctcgagttcaatttt
gaattgagcatgcaacgctttctatcgttatcttactttgatcgtcatgccgtagctgcc
caagcagcctcaacttgtatggaaatgatcaatagcttcaccgttggaggagcagcgtat
ttgcctattttggaacacatttcttttctcttcgatctcttcgaagtttcgctaagtata
agtggactcattgatctatgtctacagctccttaaagaactccctgaagttgagctcctg
ctgtctcaaaggaactcggttcttagtcgtaactacctaaccaacgtaggactgtatatc
gttggcgtacttcgccgttttcactgctgtctactactctcacccgaatcgactgctgct
gcgtttgaatcgctatgtcggattgtcaagcacgttacgaatcctgccgattgcagttcg
gcggaacgctgcattttagcgtatttgtacgacttgtacagttgctgctcattccttaag
gccaaaaacggtcaattggattcatctctaacgagttcaaactcatcttctagtcgcggc
agtagtggtgtggctatgaataccggaagtgaagtgtttgctttctcaaacgcgtaccct
aaaattaaacaaaccatatttgcccctgtcgtatcactaccgaaatccgtgcatccactg
aaccgggattttctccaggactacataactagtccacgccgaaagcccgagccccacatt
ttgcgtcaactgtcggactctgcacaattgcgttatagcttcgtcttcaacgttgtagta
gctgtgtgcaatgaagctgacaatgataagctaaatgatattgcacttctctgtgccgaa
ttgaccgccggatgttcggcactgtccgccgagtggttaggagtgttgacatctctctgc
tattcggccacggcttacatagatgtatcaacacaggtcgatgttcaggataattccatc
caccacaatttagctgtcctgttttcggtacttttagcgcgtcattgctttgggcttcag
gattttttgctatatgttggagttccttcgttggttaaaatatggaacgaagggggccgt
tccgataccgatccggaagccgaagccggtgcgcgtttgacttgccacctcgtgttgcgg
ctgtttaagacgtcggatgctccacatcctgcgtgttacagcaatagcagtcacagtgtg
aatgcctcccctcatcacacattgcaacaaaccacgccttcctctttgggtgtaaaacta
gcgtgtgatcgccatctcctagcggctactcacaatagcatttctgttggtcctgtctta
gcggtactcaaagcaatcctggtgctggcagatcgcgttccacccgaaggtaaaagtagc
cggctgacaggcagtggaagcaacatcaacagcagtaataggttgggggtaggtaacagt
tcgatggccaacgaagtcagtatctcccacatcttgggaacctcttggagcggtgactta
gacttggactttggttcgagcaatattggagtcggaggcggtcgtaacagttttggtggg
gctaccgagaacgtgccattggcatcctacgccagatatgttttgagacaaatttgctct
cagccttgggttcatcaacgttgtttgcaaaatcctgaagaattgctgaaattggatggc
cttctcgatagctgcttaagcttacgtcaagctcagcgtcttctccagatgataagccgt
cccgattccggtgccagtgtagttgaggacatcagtaacgaacaccaagattatcgacag
gtcgttaaccgtgttttagagagtctcgatcaatggcggttacgagttgcttggttggac
ctgcaactactttgccagcaattaacttcaataggcagtggaggggcatcctctactgac
atgaatcaattattggaggctatcgctcgcgctgttcttgacgtgtttgaactgtctaca
acaccaggtgtaaaagaggagccagatcagagcggaggatccagttctctgaaaaagcga
accgaagcggcagctgccaccccatcctcttctgtttccggttccgccatcaaatcgcat
ccgagtctgtcaatttcgttgattgctcctttagtgtcgaagcttccaggaactgttcaa
gggcgaattctcaaagtggcaagccaagtacttgaaagctgcaattggggtctagtttcc
aagggaaaagataaagagcgcaacattccaaaccccacactagcttttcgttccaaatcg
ttgctgtcttacgaacctttgttatctctggtgatgacgtgtcttaaaggacaagacgag
caacgcgagatgtttctttcttctcttcattctcaattgtcgcacttcaatttcttgccc
aaagaggatcgcctctatcagggtgaagacatccgagcgcgacaggcaatgctggaggca
ttgcagctccgttttagccttgttggcggtttatttgattctattttgcgtaatccaatg
gtagccatagattgggctatcctgttgactcagctagtgactaacggagtagtggatgca
tctaataataccgaactctttacgacattgcaagatatgttggctaccttactgcactct
accctagtgactgatggccagtctgatcgtggtgaagacagccgtaaatactacccgatc
ctgattaaaaaattgaaaaaagaattagctgaacgcaaaggatctccatccattcaatgt
atcaaacaacttcttcccctaccgaagctaaccagtgaatttgtgacgtgtgaaccttat
gggactctgaccgataccaagggaaacaaaattagcggatttgatagcaatgacaagaaa
caaggacaccgactgtatgagaaacagcgagtttctccctgggaaatactggaaggccac
aaaacagctgctccactctcttgggcttggtttggagctgttcgtgtcgagcggaaacca
cttcggcaccaagaagtccaacgcctgctacgtcatcatacacatgctttgcacaaacct
gcatcatactatctagaacacccaatccttccgccggaagaattggaacctcctgtagtg
gaaaagattgtcccgaaagaagaagtttgcttcaaaatggagataccgtcttctgatcaa
tcacctagaggagtaacgaaacgtggacagaaatcgaaccagcgtcgaccgcggggtcga
agaggcgctgcagctgctgcagcggccgcggccgccgctgccacagtttctcaaccgacc
gttggaggaggttatcagagcccagttgcatccggaatgtatccacctcaaccacctcct
cagtggaataattacacagcgccggccccaccagcctctcaacaaggaacagtcccaaca
ccggctgcatttttcccgcaacaaacaatcggtccgagattcccaagcgaaagaccgggc
acccaatcacgccaggcgttgagcaatatgcttagacagaggcatacaagtactcagttc
gtacccggctctggggccaatcctgctgtcgccaatcctactgctgtaccctcggctccg
ccaactggagctggaggaggagccatgcccaacaatcctcgagtcgcaccgggtgcagtg
gctggtggtggtgcaaaccaacaacaatttccaaacatttcgatggtagacaaacagaga
cagcagcagttcatgcgtcagcaaatgcgacagcagcacacaggaggtaacgtctttgga
cagcaaggaccgcaacaggcacagccacaacagcagcagcagcagcagcagcagcaacaa
caacaacaacagcagcagcagcagcaacaacaacagcaacaacaagtgcaaatggctcct
ggtggattttcaaacatacacacacccatgaatcagaatttcggcatgttccaaagcgga
acacctggtatgcaacaactcgtcaatccccaacaacagcaggcccaatcacaacccgca
cagcaacagccacagcagcaaggaatgatggggcagcattttcctcaaggagctggaaat
ttccccatgcaacaaacgcagccacaagggaatatgatcctcatgcaacagcaacatcaa
cagccccaggggcgcggaatgaacgctactcccatgcgcccgccgtttatgcagagcgcc
ggtatgcaaatgaacgcggcacagccgaaccaattcgttagaggagctatgcctaatcag
cagcaagctgttcggttacaacaccaacaaatggtggctatacaacagcaacaacaaatg
cagcacaacatggggcagcagcaacaacataatcagcattaccatcagcccttttaa
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integrated database retrieval system
