Daphnia pulicaria: 124349339
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Entry
124349339 CDS
T08670
Name
(RefSeq) beta-1-syntrophin-like isoform X1
KO
K24064
beta-syntrophin
Organism
dpz
Daphnia pulicaria
Pathway
dpz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124349339
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
124349339
NCBI-ProteinID:
XP_046655776
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Position
7:11442296..11445922
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AA seq
531 aa
AA seq
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MSLVIIRIEMTNYDRSGQVEVWAKEEWHPATATLNGDAGCLFITLENPSTNQRDGAETLN
TSAISAEQYRDSLANQKRIVRIVKSDNTGLGISIKGGRENRMPILISKIFKGLPADRTEQ
LYVGDAILSVNGEDLHNATHDEAVSALKTAENTVELEVVTSFYIAVKYLREVTPYIRKAS
LLSDIGWELQRQFLGFSHVAQTSTKPDTRSVPLLFCYLARRLKAAKKNDHRILEIHSPDG
LQSCLLRAPDTTQASQWFVSLHTTLSVLSSRGLAENGHRIAKALNTASIRMWGWLALLGH
RPKDAQNSVNMDNGSLNSHGNEPSSLMSENWQPVFVALTDRDVLLYDSVPWSIDGWTKPS
ARIPLLMTRLVSSNKSNSEGEYCTFCIRTGTSKGVVNRVFRAECERDLTLWARGLVTGTH
NCVVAIREAAWDCLWRGQEARLYLHYEDGLKLYPASEMQSAERSNTLPVPFWKASFGNLR
HSADDGVRILWLDIGNEEGEMELDMLTCPKPFVFTLHSFLSGKINRMGMIT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagtgattattagaatagaaatgaccaattatgacagaagcggtcaggtggaa
gtatgggctaaagaggaatggcacccagcgactgcaactttaaatggtgatgccgggtgt
ttgtttattacactagaaaatccttcaacaaaccaaagagatggcgcagaaactctcaac
acatcagcaatttcagctgaacaatatcgagattcattggccaatcagaaacgaatcgtc
cgtatagttaaatcggacaatactggtttaggcatatcaattaaaggcggccgagaaaac
cgaatgcccattttgatttctaaaattttcaagggattgccagctgatcgaactgaacag
ctttatgttggggatgctattctgtctgtcaatggagaagatttgcataacgcaacgcac
gacgaggccgtttctgctttgaagaccgctgaaaatactgttgaattggaagtggtgaca
tcattctacattgcagtgaagtatctccgcgaggtgacgccgtacatccgaaaagcttcg
cttctcagcgacatcggatgggagttgcagcgccaattcctgggcttttcccacgtcgcc
caaacatcgaccaaaccggatacgcgatcggtccctctcctcttttgttacctagccagg
cggctgaaagcggcaaagaaaaatgatcaccgtattttggaaattcattcacccgatgga
ttacaatcttgccttcttcgtgcaccagacaccacgcaagcatcccaatggtttgtatcc
ttgcacacgaccctttcggtgttatcttcacgtggtttagccgagaatgggcatcggatt
gccaaagcattgaacacggcttccatacggatgtggggttggctggctctcttgggtcac
cgacctaaagacgcccagaatagtgtcaatatggataatggaagtttgaacagtcatggc
aatgagccatcatccctgatgagcgaaaattggcaaccggtatttgtggccttgaccgat
cgtgatgtcttgctttatgactcggtaccgtggagtattgatggctggacaaagccgagt
gctcgcataccacttctaatgaccaggttggtaagcagcaacaagagcaattcggaggga
gagtactgcaccttttgcattcgtactggaacatcaaaaggagtagtcaatcgcgtattc
cgtgcggaatgcgaacgcgatttaactttgtgggcccgtggccttgttacaggaacacat
aactgtgtcgttgccatcagagaagctgcttgggattgtttgtggcgaggacaagaggct
cgcctttatctgcactatgaagacggcttgaaactgtatccagctagcgagatgcagtct
gctgaacgatctaacacgttgcctgttccattttggaaagcttcctttggcaatttacgc
cattcagccgatgatggcgtgcgcattttgtggcttgatatcggaaatgaagaaggggaa
atggagttggacatgttaacatgcccgaagccgtttgtgtttactttacattctttttta
tccggtaaaatcaatcgtatggggatgatcacgtga
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