Daphnia pulicaria: 124349923
Help
Entry
124349923 CDS
T08670
Name
(RefSeq) LOW QUALITY PROTEIN: VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124349923
Membrane trafficking [BR:
dpz04131
]
Protein recycling
Others
Retriever complex
124349923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
Dockerin_1
SPARC_Ca_bdg
EF-hand_9
Motif
Other DBs
NCBI-GeneID:
124349923
NCBI-ProteinID:
XP_046656818
LinkDB
All DBs
Position
1:10854782..10862276
Genome browser
AA seq
1110 aa
AA seq
DB search
MVSYKWVAKRRNYKEEELANRSLRTPNDRLPHPLLSSTYKEINPKTKPISPKKKIVLAYS
DPLSRALEGSDPLSQFVSKDEVEGPELYSPASNQKDSVSKEWLRHRTSILGKFTTSEKLS
ITSSFLQGGEKLVVKQQINDKIKHRLQQLDEFEEHVSEHKGLSRDDYVSRITQISHELHQ
AWALDQRVKALKIVIQCSKLLLETHPFAFYPSKFALITDILDNFGRMVFERIAEKGDIRL
VDHQLPKYFKPEHVSEAARETCRNWMYKIASVRELLPRIYVEMAVLKSYSFLENTDFSAN
LIRLSRAIRGVGNPLVAAYARAYLMRIGLEQFTQDRSFVIENVRDLFLSYNQLYSNSVRT
ELTVFRTDLADYLSLFSPAYDWIFQTLANTGQHDGLDAIWRQSFNQPEPGLLWLSLLSQF
PSDFVLPRCLELALHITTTPSTGVSSQQLMVMMGQVLSSNLASSSESKPGKMLNVIWPYL
SRKEDAESYLQCIEAWMPYLLRHWRVKEVHVIINDIVHHFRPKAQAHHVSQLNNIVHALI
RTDQIDYQSLFTTDPLMGLLDVYPEGQSRAEAAKILLQQFLIDYDRPLSHPLMVDHLLFI
ARILHDTLNATSVEDEKRQISELAIALIDRVDFGRDFQQMLSFYGDARAAFTNLDPVLAH
LVQAINRLSSRTRQLIQEHNEKTGHFVRACGAFAYITIPAISCPMIRFRLYLLSSQVALA
NECLGQADACLEGAINLVTEFSPTQEQWIMASLANLLSTLLVQPDTPDQNRLHHLRRLLR
NARTFSINHTMHRLRSTIYLQAIRLLSAYLQPDYIYHVPNVESNDRLYLGDDEFRSEAID
YCSQLLTELLNDINQLGNENQHRKQASLCLDLFSLLIESADLDAEPSLSQLAAQLYHLAR
KYNQWDVDYASQWARGLPARQSXTLFSLSVSLLDLLILFSLYPCVRCLSAMNRVPSQSEI
DELRTAFILMDQDRDGRITALEVQSMLQQLGINLREDIVLNLVRQASQSGSTLMNETEFF
QWVKRIQALRPPPEQTSGSSADEEAGLDLVAAFRVFDRDKNGFITKDELRLAMELIDESM
TEQGLNDLIKMADVDKDGRINYEEFAKMLL
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttacaaatgggttgctaagcggcgcaactataaggaggaggaacttgcgaat
cgaagcttaaggacaccgaatgacagattaccccacccactgcttagttccacttataaa
gaaatcaatcccaaaacaaaacctatttctccaaagaaaaaaattgtgttggcctactct
gatcccttgagccgggcactggagggcagtgaccctctcagccagtttgtgtcgaaagat
gaagtcgaagggcctgaactttactctccagcctctaaccagaaagacagtgtatcgaaa
gagtggctcaggcacagaacttccattttaggaaagtttacaacgtcagagaaattatcc
atcacatctagtttccttcaagggggagaaaaattggtcgtcaaacagcagatcaatgac
aaaatcaagcacaggctacaacagctggatgaatttgaagagcatgtgagtgaacacaag
ggactttccagggatgactatgtctcacgaattacacaaatcagtcatgaactccaccaa
gcatgggctttagatcaaagagtcaaagcactgaaaattgtcattcagtgctctaaactt
ctgcttgaaactcacccctttgccttttatccgagcaaattcgccctcattaccgatatt
ttggataactttggtcgaatggtttttgaaagaattgcggaaaaaggagatatcagactg
gtagatcaccaactaccaaagtattttaaaccggagcacgtttctgaagcagcccgtgag
acgtgtcgcaactggatgtacaaaattgcatcagtcagagaactgttgccgcgaatttat
gtcgaaatggccgtcctgaaaagctactcatttttggaaaacacggatttttccgctaat
ttgatccgattgtcgagggccattcgcggtgtgggaaatccattagttgccgcctacgca
cgcgcgtacttgatgcgcattggactagaacaattcactcaagaccgctcatttgtaatt
gaaaacgtccgagatttgtttctctcctacaatcagctatacagtaacagtgttcgaacc
gaactcaccgttttccgaaccgacttggcggattatttgtcacttttttcgcctgcctat
gactggattttccagaccttggccaacaccggccagcacgacggactggacgcaatctgg
cgacagagtttcaatcaacctgaaccaggattgctatggctatcccttctcagtcagttc
ccatccgattttgtcttacccaggtgcctggaactggctcttcatatcacaacgactccc
tcaacaggtgtttctagtcaacaactgatggtaatgatgggccaagttctcagtagcaat
ctggcttcttcttcggaatccaaaccggggaaaatgctgaatgttatctggccctatttg
agtcggaaagaggacgccgagtcataccttcagtgtatcgaagcctggatgccttatctt
cttcgtcattggagggtcaaggaagttcatgtcatcattaacgatatcgtccatcatttc
cgaccaaaggcccaagctcaccatgtttctcaattgaataacatagtccatgctttgata
aggacggaccaaattgattaccaaagcttattcactacggatccactaatggggctgtta
gacgtctacccggagggtcaatcacgagcagaagcggcgaaaattttacttcaacaattc
ctaatcgattacgatcgaccattaagtcatccacttatggtcgatcaccttttattcatc
gctcgcatcctccatgacacactcaacgccaccagcgtcgaggacgaaaagcgacagatc
agcgagctagctatcgcccttattgaccgcgtcgattttggccgtgatttccagcagatg
ctatcgttttatggcgatgctcgagcggccttcaccaatctcgaccccgtgttggctcat
ttagtccaggcgatcaatcgcttgagtagtcggacacgccagttgattcaggagcacaac
gagaaaactggccattttgttcgtgcttgtggcgcctttgcctacatcaccattccggcc
atttcgtgtccaatgattcgattccggttgtatttgctgtcgagccaagtggccttggcc
aatgaatgcctcggacaagccgacgcctgccttgaaggagccatcaatttggtgactgaa
ttctcaccgacacaggagcaatggatcatggccagtctggccaaccttctctccaccctt
ttagtccagcccgacacgcccgatcaaaatcgacttcaccatctacggcgtttgttgcgt
aacgcacggacattctccatcaaccacacgatgcatcgattgcgttccaccatctacctc
caagcgattcgtttactttcggcctacctgcaacccgattacatctaccacgttccaaac
gtggaatccaacgatcgtttgtaccttggcgacgacgaattccgttcggaggcgatcgat
tattgcagccaactgttgacggaacttttgaatgatataaatcagctgggcaatgagaac
cagcaccgaaaacaggcaagtctttgtttagatttgttttctttgttaattgagtcagct
gacctcgatgctgagccgagcctttcgcaactggccgcccaactttatcatctagcccgg
aagtataaccagtgggacgtagattacgcctcgcagtgggcccgtggcctccccgctcgc
cagtcanngactcttttctcgctctctgtctctctcctagatcttttgattctattttct
ctatatccgtgcgtccgctgcttgtccgccatgaatcgggttccatcacagtccgagata
gatgaattacggacggcttttatcttgatggatcaagatagggatggacgaataaccgcc
ttagaagttcaaagcatgctccaacaactgggcatcaatttacgtgaggatatcgtcctg
aatttagtccgacaggccagccaatcgggaagtactctgatgaacgaaacagaatttttc
caatgggttaaacggatccaagctcttcgccccccgccggaacagacgagtggcagcagt
gcggatgaagaagccggtctagatttggtagccgcctttcgggtattcgatcgggataag
aatggcttcatcactaaagacgaattgagactagcaatggaactcattgatgagtccatg
accgaacaaggtcttaacgacctcattaaaatggctgatgtcgacaaagacggacgcatc
aattatgaagagtttgccaagatgcttttgtaa
DBGET
integrated database retrieval system
