KEGG   Daphnia pulicaria: 124350113
Entry
124350113         CDS       T08670                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
dpz  Daphnia pulicaria
Pathway
dpz03018  RNA degradation
dpz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124350113
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124350113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpz03019]
    124350113
   03041 Spliceosome [BR:dpz03041]
    124350113
Messenger RNA biogenesis [BR:dpz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     124350113
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     124350113
Spliceosome [BR:dpz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    124350113
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 124350113
NCBI-ProteinID: XP_046657083
LinkDB
Position
7:complement(1935113..1935965)
AA seq 149 aa
MAPVLALGLFRRLIFTTLQTTLAIVFCTRNPAKMAAQKVDKSTPATGSPADLKEKKKERI
LDLSRYMDKLIRVKFTGGREAAGILKGYDPLLNIVLDNTVEYLRDSEDSFKLSEDTRQLG
LVVCRGTAVVLICPADGMEAIANPFIQPE
NT seq 450 nt   +upstreamnt  +downstreamnt
atggcaccggtgctagcgctaggcctattccgacgtttgatttttacaacattgcagacg
actctagcaattgttttctgtacacgaaacccggcaaaaatggcagcccaaaaggtcgat
aaatccacaccggcaacaggtagcccagcagatttaaaggagaagaagaaggaaagaatc
ttggacttgtcccgttacatggacaagttgatcagagtcaagtttaccggaggcagagag
gcagctggtatacttaaaggttacgatcctctactcaacattgtcctggacaacacggta
gaatatctaagagattcggaagattcattcaagttgtcagaagacaccagacagttgggc
ttggtggtttgtcgtggaacagcagttgtcctcatctgccctgctgacggtatggaagcc
attgccaaccctttcattcaaccagaataa

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