Daphnia pulicaria: 124350527
Help
Entry
124350527 CDS
T08670
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
dpz
Daphnia pulicaria
Pathway
dpz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124350527
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124350527
Protein phosphatases and associated proteins [BR:
dpz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124350527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Par3_HAL_N_term
Motif
Other DBs
NCBI-GeneID:
124350527
NCBI-ProteinID:
XP_046657210
LinkDB
All DBs
Position
7:complement(13798033..13812476)
Genome browser
AA seq
1783 aa
AA seq
DB search
MAYKSCNSRAVQLVHYFPCRLFSHRVQSYQLDSCDSLDIFDDATSGLSNGVYKHLSNDAA
ISVAALRSSDGAILDPDDRLADVVDDREQLAACLSNGGGGGGSGSELDEPSLGVPLVLGP
RIGLMNLRGDGTSASSNSGSPSPTDFGLHHHHHGYGVVGGSSSSSHPASRKDIEVTGQEA
ATGLMVDHLHLQVRRGSEPALNRISPDAPSTAPNTTGSSSSSASTGHHLHHHADMPPTTS
NSRDYKRWSAAPIVDPTSDSDCEERDLEVVRRHPSGPRFARSGARVSMQIFGGGVGSAAN
GGSHNNAGYRWAEAADNALLSAATAPTGVATPTATTPPDYEETMHRRTRSLRREPVGATS
ESIPLSDGHHHLYQPHHLNNSSNNNMQSQLATTQLVVLPNEGGQPLGIHVVPDYSPLGNE
LGLLVQGVEPGGRIYRDGRIAVHDRIVEINSHPLKDVPFHRAQELFRNALQSRDLRLRIV
KSNGEVSRGPASDQLDEMTQQQQQQLQQPQLIQTQQQQAPPSRVAAVSPTRKTPAVVPGT
GRASNALMTVSTRKIGKKLDLELTKGHEGLGFSVTTRDNPAGGLCPIYIKNILPRGAAIE
DGRLRSGDRLLEVNGVEMTGKTQSEVVSLLRNIPSGGVARLLISRQETEEEIQQSNQLQN
QQIQSSQLQSSTQTQQTSPKLPRQMKSISRASEESLLLLPWKQREILTLDIPVHDTEKAG
LGISVKGKTTSSSGNGTSDLGIFIKSVLHGGAASRDGRLCTNDQLLHVNGVSLQGRSNTE
AMEGLRRAVHQEGPKPGHITLTVARKMHALKDREVTLEGQSQDDTVNGTVRLGGNGGDSS
GSYDHSGGSSDQSGSTVIFVSGSGSDSRERNLVKDNRLSGISSDLRNESYYRATHETWNT
TQLQETLMNSSKSNGGHQTSVVQQGPGRKQHSQNSPTVHLTPGEVVSIDGDYLPQSRPRP
PSMMMMSTSNGSSVASTPDMTMNLPWQQQQQHSNNNIRGPGGQRSGPTDGRDRPWPNAEQ
PQPPQSPLSETSMRSDGRPSDSEAPTYTSQTSLDTDPNAPGFSRDQFGRQSMSEKRHASL
DAKNTDTYQRNKKLREERERQKQTQPESEQQQQQPQTSAVKENMPPSGRVIRRAVKRRHA
HPLVSRLEKDYLSSPTYHRSSPNLYQPNDVVGGVGGVATANRRGVAGTVDRGSRLSVAPS
MMMMMTDHYHQHQRSRVSSVESLPLIAPSPVLSLQQGQRRPPLLPPYKSQENSRPLFVRP
VDPPSRNSSRDIGPTLGLKKSSSLESLQTVVQEIQMQEEEPQIGCYGYHRPTAIRVVRGR
GCNESFRAAVDRSYDESGQPTDGTNKEPMETLDEALEVEVNEMMPPPRSPSDIGIPMLNN
KNETRKSKKKNANAAGLLLKGLGSMFRFGKHRKSAPASPESGHQSSGSDPTVSGHHSMAG
GHMIMPSSGNQSHHHHQNERRSSSGHSGSIGRSSAVTEVDRHHVLRRTLPPDERDRAELG
RQMAIAVARQAAQDEQKRIQHHYLRLMDQQQRQAAAAHDHQQKQQQQQQQQQGNSTTTGD
RSQRLHQLRAQHQKRHAEQQRQSTHTPTEQFESNKKNVPEIIHGRSASYDPYNDVRKPRS
RAAVGEPNTLMPIPAVPSSTSNYNNNYDEFQLNRRQQHYHSQRSARETRMSPPGGNGWSG
ADRPVSNYFEYESLHIAGHKVALSGPPYKPQQQQQQSGNRRPPTMQGDDTTFFRRPDRNS
TGHEFGSNQGRASQRESVYGASNYGSGSQNNPSRPAPLTGSKV
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaaaagttgtaacagtcgagcagttcaactggttcattatttcccgtgcaga
ttattctcccatcgcgttcaatcctaccagttggatagttgcgattctctagacattttc
gacgacgccacttctggcttatccaacggcgtctacaagcacctgtcaaatgatgctgcc
atttctgtagcggctcttcgatcatcggatggcgccattctagatccggatgaccgactg
gccgatgtcgtcgacgatcgggaacagttggccgcttgcctttccaatggcggcggtggt
ggtggcagcggatctgaattggacgagccttccctgggtgtccccttggtgctcggcccg
cggatcggattgatgaatctgcgaggcgacggcacttcggccagttccaactccggttca
ccttcgccgaccgatttcggtctccatcaccatcaccacggctacggcgtcgtcggcggc
agcagcagcagcagtcatccagccagtcgaaaggacattgaggtcacgggccaagaagcg
gccacgggtctcatggtcgatcacctgcacctgcaggtcagacgcggatcagagccggct
ctcaatcgcatcagtcccgacgctccgtctaccgcgccaaacaccacaggctcctcatct
tcttcagcctccaccggccatcacctccaccaccacgcagacatgccacctaccacctcc
aacagcagagactacaagaggtggtcggcagcccccattgtggatcccacatcggattcc
gactgcgaggaacgtgacttggaagtcgtacgacgccacccgtccggcccgcggttcgct
cgatccggcgctcgcgtctcgatgcaaatttttggcggaggcgttggcagcgccgccaac
ggcggaagccataacaatgctggatatcggtgggcagaagcggccgacaatgccttactt
tccgccgcaacggctccgacgggggtggccacaccgaccgcaactactccgcccgattat
gaggagacgatgcaccggaggacccgcagcctcagacgggaaccggtgggcgccaccagc
gaatcgattccgctcagcgacggccatcaccacctctaccagccgcaccaccttaataac
agcagcaacaacaacatgcagtcccaattggcaacaactcaactggtggtgctgcctaat
gaaggcggccaacccctgggcatccacgtcgttcccgattactcgcccctgggtaacgaa
ttgggcctattggtgcaaggcgtcgagcccggcggccggatttaccgggatggacgcatc
gccgttcacgaccgcatcgtcgagatcaattcgcatccgctcaaggacgtgcctttccac
cgagctcaggagctcttccgcaacgccctccagagtcgtgaccttcgtttgcggatagtc
aaatcgaacggagaagtgagtcgcggcccggcgtcggatcagttggatgaaatgacgcaa
caacaacaacagcagctgcaacagccgcaactaatacagactcaacaacaacaggcgccc
ccttcccgtgtggccgccgtgtcgccaactcgcaagacaccggccgtcgtccctggaacg
ggccgagccagcaacgccctcatgactgtcagcacgaggaaaatcggcaaaaaactggat
ttggagctgacgaaaggccatgaaggactcggcttcagtgtcacgacgcgtgacaatccg
gctggagggctttgccccatttacatcaagaatatcttacccagaggtgccgcgattgag
gatggccgactgcgctccggtgatcgacttttggaggtcaacggcgtggaaatgacgggc
aaaactcagagcgaggtggttagccttttgcgcaacattcccagcggcggtgtcgcccgt
ctcctaatttcccgacaggaaacggaagaagaaatccaacagtcgaaccaattgcaaaat
caacaaattcaatcgtctcagcttcaatcgtcgactcaaactcagcagacgagtcccaaa
ttgcccaggcagatgaaatccatcagcagggccagcgaagagagtctgctgctcctgccc
tggaagcagcgcgagatcctcacactcgacattcccgtccacgacacggaaaaggccggc
ctcggcatttcagtcaaaggcaagacgacgtcgtcatcgggaaatggcaccagcgacctg
ggcatcttcatcaaatcggttctgcacggaggagccgcttccagggacggccggctgtgc
accaacgaccagctccttcacgtcaacggcgtctctctgcaggggcgatccaacacggaa
gcgatggaaggattgaggcgggccgtccaccaggagggtcccaagcccgggcacatcacc
ctgacggttgcccgcaagatgcacgcgctcaaggatcgtgaagtgacgctggaagggcag
tcgcaggacgacacggtgaacggaacggttcgactgggcggcaacgggggcgacagctcc
ggcagttacgatcattccggaggcagtagcgaccaatctggttccaccgtcatttttgtc
agcggaagcggatcagacagtcgtgagagaaatctcgtgaaagacaatcgactctccgga
atctcctctgacctccgcaacgagagttactaccgggccacgcacgaaacgtggaacacg
acgcagttgcaggagactttgatgaattcgtcgaaatcgaacggtgggcaccagacgagt
gtggtgcagcagggtccagggcggaaacagcattcgcaaaacagcccaacggtccacttg
acgccgggcgaggtggtttcgattgacggtgattacctgccgcagtcgaggccacgccca
ccctctatgatgatgatgtcgacgtccaacggttcctcggtggcctctacaccggatatg
accatgaacttgccttggcagcaacagcaacaacattccaataataacattcgtggtccc
ggtggtcaacgctctggaccgacggatggacgcgaccgaccgtggcccaatgccgagcag
ccgcagccgccccagagtcccctgtcggaaacatccatgcgatccgatggacgtcccagc
gattcggaagcgcccacctacaccagccagacttctttggacacggacccgaacgctccc
ggcttttctcgcgaccagtttggtcgtcagagcatgtcggaaaaacggcacgcctcgctg
gacgccaagaacacggacacttatcaaaggaataagaaactcagggaggaaagagaacgt
cagaaacagacccagcctgaaagcgaacagcaacaacaacaaccgcaaacatccgcagtg
aaagagaacatgcctccatcaggtcgggtgatccgtcgcgctgtcaagcgtcgtcacgcc
catcctttggtttcgcgtctggagaaggattacctcagctcacccacctatcaccgatcc
agtcccaatctttatcaacccaacgatgttgttgggggtgttggtggtgtggctacagcg
aatcgccggggggttgcgggcacggttgatcggggtagtcgcctctctgtggccccatcc
atgatgatgatgatgacggatcattatcatcagcatcaacgttctcgtgtctcttcggtg
gaatcccttcccctaatcgctccgtcacctgtcctatcccttcaacaaggccaaagacgg
ccgccgctgctacctccatacaagtcgcaggagaatagccggccgcttttcgtccgtccg
gttgacccgccttcaagaaactcttcaagggacatcggcccgactttggggttgaagaaa
tcgtctagtttggagtcgctccagacggtcgttcaggagatccagatgcaggaggaggag
cctcaaatcggttgctacggctatcaccggccgacggccatccgggtggttcgaggacgc
ggctgcaatgaaagtttccgagcggctgtcgatcgcagctacgacgagtcgggccagcca
actgacggcaccaacaaagagcccatggagacactggacgaagcgttggaagtcgaggtg
aatgaaatgatgccaccgccacgctctccatcggacatcggaattcccatgttgaacaac
aagaacgagacgcgcaagagcaaaaagaagaacgccaacgcggccggactccttttgaaa
ggcctgggctccatgttccgcttcggcaagcaccgcaaatccgcaccagccagtccagaa
tccggtcatcagtcatccggatcggatccgacagtttcgggtcatcattccatggccggc
ggccacatgattatgccttcgtccggaaaccaatctcaccatcaccaccagaacgagcgg
agatcttcttccggtcattccggaagcatcggcaggtcgtctgccgtgaccgaagtggac
cgccatcacgtcctcagacgaactcttccgcccgatgaacgtgaccgtgcagaactcgga
cgccaaatggccatcgccgtcgctcgccaggccgcccaagatgagcagaagagaatacaa
catcattatttacggttgatggatcagcaacaacgccaggccgccgccgctcacgatcac
cagcagaagcaacaacaacagcagcagcaacaacaagggaattcaacaacaactggtgac
cgctcgcagaggctgcaccagctgcgcgcccagcaccaaaaacggcacgccgaacaacaa
agacagtcgactcacacgccgacggaacagttcgagtcgaataaaaagaatgtgccggaa
atcatacacggacgctcggccagttacgacccttacaacgacgtgaggaaaccccgtagc
cgggcagctgtcggcgaacccaatactcttatgcccattccggccgtgccttcctccacg
tccaactacaacaacaattacgacgaatttcaactcaatcggcgtcagcagcactatcac
tcgcagcgatcggctcgcgagacgcggatgagcccacctggtggaaatggttggtcgggt
gccgatcggcccgtctccaactatttcgagtatgaaagtcttcacattgctggtcacaag
gtcgcattaagcggaccaccttacaaacctcagcaacaacaacaacaatcgggaaatcgt
cgcccacccaccatgcagggcgatgatacaacatttttccggcgccctgatagaaacagc
actggtcatgaattcggaagcaatcaaggacgggcatctcaacgggaatcggtttatggt
gcatccaactacggaagcggcagccaaaataaccccagcagaccggctcctttgacagga
tctaaagtctga
DBGET
integrated database retrieval system
