Daphnia pulicaria: 124350936
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Entry
124350936 CDS
T08670
Name
(RefSeq) cytoplasmic FMR1-interacting protein-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124350936
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124350936
Factors involved in mRNA localization
Other mRNA localization factors
124350936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
124350936
NCBI-ProteinID:
XP_046657627
LinkDB
All DBs
Position
7:complement(12645100..12651104)
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AA seq
1309 aa
AA seq
DB search
MATEKVTLADALSNVEVLDELPLPDQQPCIEAQACSVIYQANFDTNFEDRTAFVTGVAKY
IEEATVHASLNDMLQEGQEHAVMLYTWRCCSRAIPQPKSNEQPNRVEIYEKTVQVLAPEV
NKLLNFMYFQRKAIERFSAEVKRLSHTEKRKDFVSEAYLLTLGKFINMFAVLDELKNMKS
SVKNDYSAYRRAAQFLKVMTDQQALQESQNLSMFLATQNKIRDSLKEALEKIPSYEELLA
DVINLAVHMLETRMYLLPEEKHMLVKVLGFGLFLMDSEICQINISKLDHKKRIRLDKIDK
IFKNLEVVPLFGDMQIAPFNYIKRSKTYDASRWPLCGATLPSPQADLMVHLPQIREDHVK
FTSELARYSNEVTTTYKETRSPEEMKEMMELALRGLQLLSEWTSIVTELYSWKLLHPTDH
HQNKDCPAEAEEYERATRYNYTEEEKFALIEIIAMIKGLQVLMARMETVFADAIRRHVYA
ELQDFVQLSLREPLRKAIKNKKDLIRSIIVSVRETCADWIRGTEPQDDPATKGKKDPDNG
FDIQVPRRNVGPSSTQLYMVRTMLESLIADKSGGKRTLRKDIDGSYLMAIDQFHKNSFFW
NYLLNFNETLQQSCDLSQLWYREFYLEMTMGKRIQKCCVKHQHNEECKDVVTLEKRIQFP
IDMSMPWILTDHILRTKEPSMMECVLFPLDLYNDSAHYALTVFRKQFLYDEVEAEVNLCF
DQFVYKLSEQIFAYYKHLAGSIMLDKRFRAECAALGTRFTYPPANRYETLMKQRHVQLLG
RSIDLNRLISQRVNAALLKALELSVARFEGGDITGVVELSGLLDVNRLTHKLLSSNLAMD
DFDAMWREANHNVLAPYGRVTLHVFWELNYDFLPTYCYNAATGRFIKCRDLLFSQPVHRD
KPPQTPYHYLWGSKALNIANGNIFNQYSGFVGAPHFKAISNLLGYQGIAVVMEEILKIIK
SLVQGNILQFTKTLMQAMPKQCKMPRYDYGSTGVLGYYQAQLNDIVQYPDARTELFHNFR
EFGNALIFCLLIEQAMSQEEVCDLLQAAPFQNILPRPFVKEGEKLEAKQKKLENKYAALQ
IVANIEKLGTAKQTLIAREGDLLTRERLCCGLSVFEMVLNRIRTFLDDPIWTGPVPVNGV
LTVDECTEFHRLWSALQFVYCIPVGENEFTVEQLFGEGLHWAGCTMIALLGQQRRFEALD
FCYHILRVQRVDNKDETVKGIQLKRLVDRIRRFQVLNSQVFATLNKYLKTSSGDVDSQPV
EHVRCFQPPIHHSLAVNQGHYYRPDQLLRQSMNVANTSGIIANLTLEQH
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgagaaagttacactcgccgatgcgttatctaacgttgaagtgctagatgaa
ttgccacttccagatcaacaaccatgtatcgaagctcaggcttgttcagttatttatcaa
gcaaactttgataccaattttgaagatcgaactgcctttgtaacaggagttgcgaaatac
atagaagaggcaactgttcacgcaagcctgaatgatatgcttcaagaaggtcaagagcat
gctgtaatgctgtacacttggagatgctgttcaagagcaattccgcagcctaagtcaaat
gaacaacccaacagagttgagatatacgaaaaaacagttcaggtcctggctccagaagtc
aacaagctgttaaatttcatgtattttcaaagaaaagcaatcgagcgcttcagtgcagaa
gtgaaacgactttcccatacggaaaagcgtaaagattttgtttctgaagcttatcttcta
actttgggaaaattcattaatatgtttgctgttctggatgaattgaaaaacatgaagtct
agtgtaaaaaacgattactctgcttaccgcagagctgcccagttccttaaggtgatgaca
gatcagcaagcgttacaagaatcccaaaatctgtcgatgtttctagctacccaaaacaaa
attcgcgattcacttaaagaagctctcgaaaaaattccatcttatgaggagttgcttgcc
gatgtaatcaacttggccgttcatatgctggaaactcgcatgtaccttcttccggaagaa
aaacatatgctggtcaaagttctcggttttggattgtttctcatggattctgaaatatgt
cagataaacatttccaaactagatcacaaaaagcgaattagactcgacaaaatcgacaaa
atttttaaaaatctggaggttgtccctctgtttggtgacatgcaaattgctccatttaat
tatatcaagcggtcaaaaacctacgatgcttcacgatggcccttgtgtggtgcaactctg
ccttcacctcaggctgatttaatggttcatttgccacaaatccgtgaagatcacgttaaa
tttacgagcgaactggcacgctatagcaacgaagtcacaactacttataaagaaacgcgc
tccccggaggagatgaaagaaatgatggagcttgctcttcgtgggctacagctgctgtct
gaatggaccagcatagttactgaactttattcttggaagctcctgcatcctacagaccat
caccagaataaagactgccccgcagaagcagaagaatatgaacgcgctacccgatacaat
tacaccgaagaggagaaatttgctctcattgaaatcattgccatgataaagggattacaa
gttctcatggccagaatggaaacggtatttgcggacgctatacgtcgacatgtctacgct
gaattacaagattttgttcagcttagtttgcgtgagcccctgagaaaggcaatcaaaaat
aagaaagacttaattcgcagcattatcgtctcagtccgagaaacctgtgcggattggatt
agaggcactgagccacaggacgacccagctactaaagggaaaaaagatcctgataatggg
tttgatattcaagttccacgacgaaatgttggaccttcttcgacccaactttacatggtt
cgcactatgctagagtcgttaatagctgacaaatctggtggaaagcgaacgctacgtaaa
gacattgatggatcataccttatggcaatcgaccaatttcataaaaattcttttttctgg
aactatttgctcaatttcaacgaaacactgcaacaatcgtgcgacctttcacaactttgg
tatcgagaattttatcttgagatgacaatgggcaaaaggattcagaaatgttgcgtgaaa
catcaacacaacgaggagtgcaaagacgtggtcacactggagaaaaggattcagtttcct
atcgacatgtcgatgccttggatcctgactgatcatattttgcgtacgaaggagccttct
atgatggagtgcgtacttttcccccttgatctctataacgattcggctcattatgcgctg
accgttttccgcaaacagtttttgtacgacgaagttgaagctgaagtcaatctgtgtttc
gatcagttcgtctataagctgagcgaacaaattttcgcctactacaaacaccttgctggc
agcatcatgctggacaaacgatttcgtgctgagtgtgccgcattaggtacgcgctttacc
taccctcctgccaatcgttacgaaactctgatgaaacaacgccacgttcagttgttggga
cgttcaattgatttaaatcgattaatatctcaaagagttaacgctgcacttcttaaggca
ctcgagctatcggttgcacgttttgaaggtggagatatcaccggtgtagtagaattaagc
ggtctcctagacgtgaaccgattaactcacaaattgttgagcagtaaccttgcgatggat
gatttcgacgctatgtggagagaagccaatcataacgttctggcaccctatggccgagtg
acgctacacgtcttctgggaactcaactacgatttcttacccacttattgctataatgcc
gcaacagggcgcttcatcaagtgccgagacctacttttcagtcagcctgttcaccgagat
aaaccacctcaaacgccttaccattatctttggggcagtaaggcgctcaacatcgcgaat
ggaaacatcttcaatcaatattccggatttgtgggtgcaccacattttaaggctatttca
aatcttttgggttaccagggcatcgccgtagtcatggaagagatcctcaagataatcaaa
tcgttagtacagggaaacattttacaattcaccaaaaccctaatgcaggcgatgccaaaa
cagtgcaaaatgcctcgttacgattacggatcaactggtgtcttgggatattatcaggcc
caactgaatgacattgttcaataccctgatgcgaggacggaattatttcataatttccga
gaattcgggaacgcgctgatattttgtcttctgattgaacaagcaatgtcacaggaggaa
gtttgcgatctacttcaggcagcgccttttcaaaatattcttccaagaccgttcgttaaa
gagggcgaaaaattggaagccaagcagaaaaaactggagaacaagtatgcggcattgcaa
attgtcgccaacatagaaaagctgggcaccgccaagcaaaccttgattgcacgggaggga
gatcttttaaccagagaacgtctttgctgtggtctttctgtcttcgaaatggtgctcaat
cgcatccgcacctttttagacgatccaatttggacgggtcctgttcctgtcaatggcgtc
ctaacggtcgacgagtgtacagaatttcaccgactatggtcagctttgcagtttgtgtat
tgcattcctgttggcgaaaacgaatttaccgttgaacagcttttcggcgaaggacttcac
tgggctggatgcactatgattgccttgcttggacaacaacgaagattcgaggcactggat
ttctgttatcatattttgcgcgtacaacgcgtcgataacaaagacgaaactgtgaagggt
attcaactaaagcgattggttgatcgaattcgccgctttcaagtcttgaattcacaagtc
ttcgctacgctaaacaaatatttaaaaacgagctcgggtgatgtagattctcaaccggtg
gagcatgtgcgttgttttcagcctcccatacatcactctcttgcagtgaatcagggtcat
tattatcgacctgaccaactacttcgtcagtccatgaatgtagccaacacttctgggata
attgcaaacttgacgctagaacagcactga
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