Daphnia pulicaria: 124350949
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Entry
124350949 CDS
T08670
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00061
Fatty acid biosynthesis
dpz00071
Fatty acid degradation
dpz01100
Metabolic pathways
dpz01212
Fatty acid metabolism
dpz04146
Peroxisome
Module
dpz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124350949
00071 Fatty acid degradation
124350949
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124350949
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dpz01004
]
124350949
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpz04147
]
124350949
Enzymes [BR:
dpz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124350949
Lipid biosynthesis proteins [BR:
dpz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124350949
Exosome [BR:
dpz04147
]
Exosomal proteins
Exosomal proteins of breast milk
124350949
Exosomal proteins of breast cancer cells
124350949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
124350949
NCBI-ProteinID:
XP_046657641
LinkDB
All DBs
Position
7:complement(7331181..7334699)
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AA seq
707 aa
AA seq
DB search
MTSLKPMESALLLFIRCVLSIYTFITWPIYYIIQKPWNVKANRSKLRAVSLTSGDDFILY
RSVTEIRDVHARFLQDKIDTMEKVFRFAVRQHGQKSALGTREILAEEDEMQPNGRVFKKF
LLGQFQWRTFTQTDSEAESFGRGLRELGLKPRENVVVFAETRAEWLISANGCMKQNMPIV
TLYATLGDDAIIHGINETEVSCVITSQELLPKFKNILPCTPNVSLLIVMEDPLKPLDSNG
YGDTVGVLPYKEVIRLGDFSSKSGLIPKPDDTAIIMYTSGSTGSPKGVIMSHQNVVNAML
GYTSVTTFYENDVYMAYLPLAHVLELISESIWMLYGIPIGYSTPLTMTDKSSKIKRGSQG
DASVLRPTIIASVPLVLDRIHKSIQEKIEGGPAITKMLFNLAMEYKNEWTDRGYETPIIN
STLFKPIRALLGGRLRFVLSGGAPLAPETHKSLKTTLCCPVLQGYGLTETCAATTVMDLD
DNSLGMTGGPLTCCDVKLVSWEEGNYRIKDWPNPRGEIHIGGSNVAVGYYKQPEKTKEEF
YDENGRHWFRTGDIGEFSQEGFLQIIDRKKDLVKLQYGEYVSLGKVESELKISPLVDNIC
IYADPTKLFPVALLVPNLDHLKNLAEKNGIEMSTLEELCNPQMEKLVLVELQKHGAKCRL
QKFEIPQALTLVPDIWTPDSGHVTAAFKLRRKVVQDRYKAAIDRMYS
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtttgaaaccaatggaatcagcacttcttcttttcattcgatgtgtcctcagt
atttacacttttataacatggcccatctactatataattcaaaaaccatggaatgtcaaa
gctaatcgtagcaagttaagggcagtgtcattgaccagtggagatgatttcattctatac
agaagtgttacagaaatcagggatgttcatgctaggttcctccaagataaaattgatacc
atggaaaaggtttttcgttttgcagtgcgtcagcatggccaaaaatcagctcttggaaca
agagaaattctggctgaagaggatgaaatgcaacccaatggaagggtttttaaaaagttc
ttgttgggtcaatttcaatggcgcacatttactcaaactgacagtgaagcagaaagcttt
ggtcgtggattgagggagttggggttgaaaccaagagaaaatgtagtggtgtttgctgag
acaagagctgaatggttaatttctgcaaatgggtgcatgaaacaaaatatgccaatagtt
acactatatgccactcttggtgatgatgccattattcatggaattaatgaaacagaagtt
tcttgtgttattacctctcaagaactgctacctaagttcaagaacatcttgccatgtacc
ccaaatgtctctttactgattgtcatggaagacccattaaaacctttagattcgaatggc
tatggagacacagttggagtactcccgtacaaagaagttattcgactcggtgacttttca
agcaaatcgggattgataccaaagcctgatgacacggccattattatgtacacaagtggc
tcgactggatcaccaaagggagtaatcatgagtcatcaaaatgttgtaaatgctatgttg
gggtacacaagtgtgaccactttctacgaaaacgacgtttacatggcgtaccttccgttg
gctcacgtactagagctgatttcagaaagtatatggatgttgtatggaataccaattgga
tattcgaccccgcttactatgacagataaatcgagtaaaatcaaacgaggtagtcaaggt
gatgcctccgtccttcgaccaaccatcatcgctagcgtacctctcgttcttgaccgtatt
cataaaagcattcaagaaaaaatagaaggaggtcctgcgattactaaaatgcttttcaat
ttggctatggagtacaagaatgaatggactgacagaggatatgaaactcccattattaat
tcgacattattcaagcctatccgtgcattgcttggaggacgccttaggttcgttttgtcc
ggtggtgcacctctggcaccggagacgcacaaatctttgaaaactacattatgctgtccc
gtcttacaaggatacggccttacagaaacatgcgctgctacaactgtcatggatctcgat
gataattctttgggtatgaccggaggaccccttacttgttgtgatgtcaagttagtttcc
tgggaagagggaaattacagaatcaaagattggccaaatccgcgcggagaaattcacatt
ggtgggtcgaatgttgctgttggttactataaacagcccgaaaaaaccaaagaagagttt
tacgatgagaatggaaggcattggttccgtacgggagacattggggaattttcacaggaa
ggatttctccaaattattgaccggaaaaaagacttggtcaaactacaatatggcgaatat
gtatcgttgggtaaagtagaatccgaattgaaaatcagcccattggtcgataatatctgc
atttatgctgatccaacaaaattatttcctgtggccttattagtaccaaaccttgatcac
ctgaaaaacttagccgaaaaaaatgggattgaaatgagcacccttgaagagctctgcaat
ccacaaatggagaaattagttcttgtagaacttcagaaacacggagcgaaatgtcgatta
caaaaatttgaaattccccaagctctcacacttgtccccgatatctggacgcctgactct
ggacatgttactgcagcattcaaattaaggcgaaaagtcgtccaagatcgatataaagca
gccatcgatcgaatgtactcgtaa
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