Daphnia pulicaria: 124351902
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Entry
124351902 CDS
T08670
Name
(RefSeq) transcriptional repressor CTCFL-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124351902
03036 Chromosome and associated proteins [BR:
dpz03036
]
124351902
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124351902
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124351902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-met
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_15
Ldl_recept_b
zf-C2H2_7th_ZNF462
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
124351902
NCBI-ProteinID:
XP_046657929
LinkDB
All DBs
Position
1:complement(5778925..5782526)
Genome browser
AA seq
700 aa
AA seq
DB search
MAALKQEEESISEIQNYLDTFNKEIEDPNQIPGSQLANKEAVVSNEVEAADAPEDGGTYF
VDQSGQYYYQSNDVDGGDGTATLVAQDGGTMVSIPNNGTSADEGVVLAQGEGGYQTVTIL
PPESSSGEVSYVLIVQQPDGAEQAVISSEVLDGTEGEVIQEDDEGEDDENFDGDEDKDED
QNLAVYDFDEGEEGGSADGQDSEDEDIKPRMSKGGSKKVTQTVSQAHMCNYCNYTSPKRY
LLSRHMKCHSEERPHKCSVCDRGFKTLASLQNHVNTHTGTKPHRCKHCHSSFTTSGELVR
HVRYRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLR
IHTGEKPYECDICHARFTQSNSLKAHKLIHTGNKPIFQCELCPTTCGRKTDLRIHVQKLH
TSEKPLKCKRCGKSFPDRYTFKLHSKTHEGEKCFKCDLCAYASISQRHLESHMLIHTDQK
PYQCDQCDQCFRQKQLLRRHQNLYHNPDYVPPPPGEKRHECPECGKPFRHKGNLIRHLAL
HDPDAAQQELRAFRAARKQRIKDGQSLEGLTEGEETDMEDEDISLGLNSNEELVSVQGQD
GQQYVVLEVIQLEGEGGDEDEATMMEVEGATEMDGSLMEGEGNTMTSLDDEIEDSMQATP
RVRRSSQVAKAQDTSKDVANCFGFDDDEDDEEDEEEEDEK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttgaagcaagaggaagaatctattagtgagatccaaaattatctcgacaca
ttcaacaaggaaattgaagatcccaatcagatacctggttcccagctagctaacaaggaa
gctgttgtttcaaacgaagtagaagctgctgatgcacctgaagatggtggaacctatttt
gtagaccaaagtggacagtattactatcaaagtaatgatgttgatggaggagatggtaca
gcaacgcttgtcgcccaagatggaggtactatggtatccattcccaataatgggacttca
gccgatgaaggggtagtgcttgcacagggagaaggtggctaccaaactgtcactatatta
cccccagaatcatcttctggtgaagttagctatgttttgattgtccagcagcctgatggt
gctgaacaagctgtcatttcatctgaagttcttgatggtactgaaggtgaagttattcaa
gaagatgacgaaggcgaagatgacgagaactttgatggtgatgaggataaagacgaggac
caaaacctagcggtttatgatttcgacgaaggcgaagaaggtggtagtgctgatggtcag
gattccgaagatgaagatattaagccaaggatgagtaaaggtggctccaaaaaggtcaca
cagaccgtctcccaggcgcatatgtgtaactactgcaactacactagcccaaagcgatat
ctgctgtctcgacacatgaagtgtcactcagaagagcgtccgcacaagtgcagtgtatgt
gatcggggattcaagacgttggcttcgctacagaaccatgtcaacactcacacgggcact
aagccacatcgatgcaaacattgccacagttcgttcacaacttcaggtgagcttgtccgt
cacgtacgttaccgccacacacacgagaaaccacatcgttgcaccgagtgcgactacgct
tccgttgaactaagcaagctcaagcgtcatatgcggtgccatacgggtgagcgaccctac
cagtgccctcactgtacgtatgccagcccggacaccttcaagttgaagcgccacttgcgc
atccatactggcgaaaaaccctacgagtgcgatatttgccatgcgcgattcacacaatcc
aacagtctcaaggctcacaaactcattcacacaggcaacaaaccaattttccagtgtgaa
ctatgtccaaccacttgtggccgaaagactgacttacggatccacgttcagaaattgcac
acctctgaaaagcctttaaaatgcaaaagatgtggcaaatcgttccccgatcgttatact
ttcaaattgcacagcaaaactcacgaaggagaaaaatgcttcaagtgcgatctatgtgct
tacgcgtcgatctctcaacgccatttggaatcacatatgctgattcacacggaccagaaa
ccttaccagtgcgatcagtgcgatcagtgcttccggcaaaagcagttgttacgtcggcac
caaaacttgtatcacaatcccgactacgtgcccccaccgcctggagagaaacggcatgag
tgccctgaatgtggaaaacccttccgccacaaaggcaatctgattcgccatttggcgctc
cacgatcctgatgccgctcagcaagaattgcgagcattccgcgcggctcgtaaacagcga
attaaggatggccagagtttagaaggtcttactgaaggcgaagagactgatatggaggat
gaagacattagccttggtctcaactctaatgaagagctggtctcggtacaaggtcaagat
ggacagcagtatgttgtccttgaagtgattcaattagagggtgaaggtggagacgaagat
gaggccaccatgatggaagtagaaggagctaccgaaatggatggttccctgatggaagga
gaaggaaatactatgacctccttggatgatgaaattgaagattccatgcaagccacccct
cgcgttcgtcgtagctctcaggttgctaaagctcaggatactagcaaggacgtggctaat
tgttttggattcgacgacgatgaagatgacgaagaagatgaggaggaggaagatgaaaag
tga
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