Daphnia pulicaria: 124352630
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Entry
124352630 CDS
T08670
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124352630
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124352630
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
90S particles
Helicases
124352630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Ant_C
AAA_11
Motif
Other DBs
NCBI-GeneID:
124352630
NCBI-ProteinID:
XP_046658136
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All DBs
Position
8:complement(6982635..6985753)
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AA seq
869 aa
AA seq
DB search
MESGSTNGNAKTPDDNKQNGPGSQKTKKKNNSKGKLHPSRVKASAIEQHEIKNLQIRYTS
VETSAVLKFKDIPLSKKTLQGLQQNEYTTPTEVQKESIVLALRGLDVLGAAKTGSGKTLA
FVIPVLERLYCMQWTRLDGLGALIITPTRELAYQIFETFRKVGIQHDFSAGLIIGGKDLN
FERKRLDQCNIMICTPGRVLHHMDENPLFDCSNLQILVIDEADRCLDLGFQQTMNGIIEN
LPPKRQTLLFSATQTKSVKDLARLSLKDPVYVSVHENAQYSTPESLRQSYIITPIQNKVD
ILWSFLRSHRKKKLIVFLTSCKQVRFIHQAFTRLRPGLSVLALYGTMHQMKRMSVYEEFC
EKQTAVLFATDIAARGLDFPNVDWVIQMDCPDDPSSYIHRAGRTARYQKGGESLLMLLPS
EEAMVEQLAQKKIPIQKIEVNPSKLVSIQRKLEAMLARDVELKQMAQRAFVTYAKSVFLM
KDKSIFDVTSIDLNALARSLGLALAPRVRFLQKHLKATESAAPPQAPRMLKPNYDTPAEK
PIAAQSTEQQWRRNDLEAPYDFHAEDELQDSDSDDGIFKIKRQNHALPGFEEAEEEEVEI
GVEKKKKEKILTKEKVAKRILAKKLKANKIVNFDDEGNRIYDASREKVSELGRALEIEAS
TSITGGINLVEAKKAMEEEDKYDKEIFRQRIKAKHREDRLKAKAERRLANRVEKEEEVAN
VEGEEEDEESEGDESVDGSVGEIIDALPDPDRIYGAKEDDSEEEGDVYRGPAVAKKRSRL
PSESEEDDDSEDDSESDNDEAPVKPTPITRKRRQPSESEELPTPTKTKQKWIKKKPPKKQ
KPAKNSKFDTGLDLAMDEELALHILGSKN
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggtagtacaaatggtaatgcaaaaaccccggatgacaacaaacaaaatgga
cctgggtcacaaaagacaaagaagaaaaacaactccaaaggaaaattacacccaagtcga
gttaaagcaagtgccattgagcaacacgaaatcaagaatttgcaaattcgctatacatca
gtggaaacatcagctgtactaaaatttaaagatattccgctttccaagaaaaccttgcaa
ggtctgcagcagaacgagtacaccacgccaaccgaagtccaaaaagagagtattgttctt
gccctaagaggtctagatgtattgggagctgccaaaaccggtagtggaaaaacccttgcc
tttgtgatacctgttcttgaaagactgtactgcatgcaatggactcgactagatggtctt
ggtgccctaattataaccccaactcgagaattggcataccagatatttgagactttcagg
aaggttggaatccagcatgatttttctgctggtctcatcattggaggcaaagaccttaat
tttgaaaggaaacgattagaccaatgtaacatcatgatttgcacccctggaagagtcctt
catcacatggatgaaaatcctctctttgactgctccaacctacagatattggttattgac
gaggctgatcgttgtttggatctgggattccagcaaacgatgaacggtatcattgaaaat
ttacccccaaagaggcaaactctgctgttttccgccacacaaaccaaatcagtcaaagat
ctcgctcgtctcagtttaaaggaccccgtttacgtttctgttcacgaaaacgctcaatac
tccacacccgagtctttgcgtcaaagctacatcattactcccattcaaaacaaagtcgac
attttatggtcttttcttaggagtcataggaagaagaaactgattgtctttttgacttct
tgcaaacaggttcgatttattcatcaagcttttactcgtctgcgacctggtctttctgta
ttggctttgtatggtaccatgcaccagatgaaacgcatgtcagtctacgaagagttttgc
gagaagcaaactgccgtcctgttcgccacagacattgccgctcgaggactcgattttcct
aatgttgattgggtaattcaaatggattgtccggacgacccaagtagctacatccaccga
gccggtcgtactgctcgttatcagaaaggaggggaatcgttgctgatgctgctgccctca
gaagaagccatggttgagcagttggcccagaaaaagatccccattcagaaaattgaagtc
aatccttcgaaattggtttccattcagcggaaactcgaagccatgctcgctcgtgatgtt
gaattgaaacaaatggcccaacgggcttttgttacttatgccaaatcagttttccttatg
aaagacaagtcgatttttgatgtcactagtatcgatttgaatgctttagctcggtctttg
gggctcgctcttgctccacgcgtccgtttcctacaaaaacatctcaaggcaacagaatcg
gctgcgcctccacaagctcctcgaatgttgaaaccaaactatgacaccccagccgagaag
cctattgccgctcaatcgactgagcagcaatggagaagaaacgacctggaagcaccttac
gatttccacgcagaagacgaattacaggattccgatagcgatgacggcattttcaaaatc
aagcggcaaaatcacgctctccccggattcgaagaagccgaggaggaggaggttgaaatt
ggtgttgagaaaaagaagaaggaaaagatcttgaccaaggagaaagttgccaaacgaatc
cttgctaaaaagctgaaggccaataaaattgtcaactttgacgacgaaggaaatagaatt
tatgacgcatctcgcgagaaagtttccgagcttggccgagctctcgaaattgaagcttcg
acatcgattactggtggcatcaatttggttgaagccaaaaaggcgatggaagaagaggat
aaatacgacaaagaaatcttccgtcagcgtatcaaagccaaacatcgcgaagatcgactc
aaagccaaagcagagcgtagactcgccaaccgggtagagaaggaagaagaagtagcgaat
gtcgaaggtgaggaggaggacgaagagtctgaaggtgacgagagtgtcgatggttcagtc
ggagaaattatagacgctttacccgatcccgatcgcatctacggcgccaaggaagatgat
agcgaagaagaaggtgacgtttacagagggccagctgttgcaaagaaacgctcgcgattg
ccgagcgagagtgaagaagatgacgacagtgaagatgatagtgaaagtgacaatgacgaa
gcacctgtcaagcctaccccgattacaaggaaacggcgacaaccgagtgaaagcgaagaa
cttcccacaccgacaaagacgaaacaaaaatggatcaagaagaagccacctaagaaacag
aaaccagctaagaacagtaaatttgacactggcctggatttggctatggacgaagagttg
gctcttcacattcttggctctaaaaattaa
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