Dinoponera quadriceps: 106742786
Help
Entry
106742786 CDS
T05610
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dqu
Dinoponera quadriceps
Pathway
dqu03022
Basal transcription factors
dqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106742786
09124 Replication and repair
03420 Nucleotide excision repair
106742786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dqu03021
]
106742786
03036 Chromosome and associated proteins [BR:
dqu03036
]
106742786
03400 DNA repair and recombination proteins [BR:
dqu03400
]
106742786
Enzymes [BR:
dqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
106742786
Transcription machinery [BR:
dqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106742786
Chromosome and associated proteins [BR:
dqu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106742786
DNA repair and recombination proteins [BR:
dqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106742786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
DEAD
ResIII
nSTAND3
AAA_11
Motif
Other DBs
NCBI-GeneID:
106742786
NCBI-ProteinID:
XP_014471542
UniProt:
A0A6P3X032
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKISVDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCVLEMPSGTGKTITLLSLIVAYM
LEYPLNVTKLIYCSRTVPEIEKVIEELKKLIDYYEIETKSKPKIVGLVLSSRKNMCIHPE
VSKEREGKIVDGRCHSLTASYVRERHNHDESTPICNFYEGFDMEGREQIMPPGIYSLDDL
KDYGRDRGWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSKCSVVVFDEAHNID
NVCIDSMSVKINRKLMERSTNNIQLLEKTVADMRDCDVNKLKDEYERLVAGLKDAQLARE
TDVILANPVLPNEIFEEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVVQESPATFLRD
IQAKVSIERKPLRFCAQRLASLLRTMEITDMTDFSPIILVTHLATLVSTYTQGFTIIVEP
FDDKTPTVLNPILHFSCLDSSIAIKPIFDRFQSVIITSGTLSPLDMYPKILNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFSATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLTDSLCNLSTEEAIQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEETARIEEKAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagcgttgacggattgattgtatattttccatacgattatatttatccggag
caatatgcttacatgcttgaactcaagcgtggcttggatgccaaggggcattgtgtgctg
gagatgccttcaggtactggcaaaacaattactctcctatcactcattgtggcctatatg
ttggagtatcccttgaatgtgacaaagttgatttattgttctcgaacagtaccagagata
gaaaaagttatagaggaattaaagaagctcatagattattatgagatagaaactaagagc
aagccaaaaattgtcggcttagttctcagctcacgtaaaaatatgtgtatacatcctgag
gtcagtaaagaacgagaaggtaaaattgtggatggtcgctgtcactctcttaccgcgtca
tatgtacgagagagacacaatcatgacgaatccactccaatttgtaacttttacgaagga
tttgacatggagggtagagaacagattatgcctcctggtatttattctctggatgattta
aaggattatgggagagatcgcggatggtgtccgtatttcctcgcaagatttacaatctta
catgcacaaattgtggtatacagttatcattacttactggatccgaaaatcgcggagacc
gtttccaaagaactgagcaaatgttcggtagttgtcttcgacgaggctcacaacatcgat
aacgtctgcatcgattccatgagcgtgaagataaataggaagctgatggagagaagtacg
aataatatacagctcttggagaaaaccgtggccgatatgagagactgtgacgtgaataag
ttgaaagatgagtacgagaggctagttgcgggtttgaaggatgctcagcttgcgagagag
accgacgttatcctggctaatcccgtattaccgaacgaaatattcgaagaggtcgtgccg
ggcaacatacgaaatgccgagcattttgtcagcttcctgaaacgattcgtcgagtaccta
aagactcgtctgcgcgtccagcacgtcgtgcaagagtcgcccgcgacgttcttgagggac
atccaagcgaaggtctccatcgagcggaaaccgttgcgattttgcgctcagcgattggcg
tccctcttgcgtaccatggagataacagacatgacggatttctcgccgataatcctagtg
acgcatcttgcgactttggtctccacgtatacacaggggttcacgatcatcgtggaaccg
ttcgacgataaaacgcctacagtcctgaatcccatcttgcacttcagctgtttggattct
tcgatcgccatcaagcccatattcgacaggttccaatctgtgataattacctccgggacg
ctctccccgttggacatgtatcccaagattctcaatttccacccggtcataatgtcatcg
ttcactatgacattagccagaccgtgtcttctgcccatgatcgtggccaaaggcaacgat
caggtagctatttcgtcgaaatacgaaacacgagaggacgtggccgtcataagaaattac
ggtcagctgttggtcgaattctccgcgacggtgcccgacggtttagtctgtttcttcacg
tcgtacctgtacatggaatctgtagtggctgcttggtatgatcaaggcgtggtggatcaa
cttcagaggcacaagctgctgttcatcgagacacaggactcggcggaaaccagtttagct
ctgatcaattacataaaggcctgcgagaacggcagaggcgcggtgttgctttcggtcgct
cgtggaaaggtatccgaaggtgtcgacttcgatcatcacttgggcagagccgtgctgatg
ttcggcataccttacgtgtacacgcagtcgcgaatcttgaaggcgcgcttggaatacctc
agggaccagtttcaaatacgagagaacgatttcctaactttcgacgccatgaggcacgcc
gcccagtgcgtaggacgtgcgatcagaggcaaaacggattacggtattatggtgttcgcg
gataagagattctcaaggatagataaacgaagcaaattaccgaaatggatacaggagcat
ttgaccgacagcctatgcaacttatctaccgaagaagctatacagatcagcaaaagatgg
ttacgacaaatggcgcagccgttcacgcgcgagaatcagcttggattgtcgctgctaacg
agggagcaactcgagaaagaagagactgccaggatcgaagagaaagcgcaacaaaattga
DBGET
integrated database retrieval system
