Dinoponera quadriceps: 106742859
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Entry
106742859 CDS
T05610
Name
(RefSeq) vacuolar protein sorting-associated protein 13C isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dqu
Dinoponera quadriceps
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dqu04131
]
106742859
Membrane trafficking [BR:
dqu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106742859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
IGPD
Motif
Other DBs
NCBI-GeneID:
106742859
NCBI-ProteinID:
XP_014471665
UniProt:
A0A6P3X018
LinkDB
All DBs
Position
Unknown
AA seq
3250 aa
AA seq
DB search
MVFESIVAELLNKVLGEYIENLDYSQLKLSLWGGDVVLKDLLIKESALDVLDLPVRLEYG
RLGKLILKIPFKDMWNGQIDAIVEELFVLVVPTSQVSYNEEKEIKAQLEAKWAELARVEK
RKQLADLKSQEKLDDSMVEKLIARMIKNIHVEIKRIHVRYEDHVTFKNHPFSVGFTLNTF
VLESCTDSWETTGNLKDMYAIPQIYKLCGLDGLAVYLNTSVEQYSKSSHSSYPGLFCDGI
ATMDYTPADYQYLLGPINVNSKLRLNPKPESDGSNYTIPKVWLDLEMLKLRIGLTKRQYQ
TLVRLGEGLDQAQKAAPYRKYRPNLMSYKSHYKEWWRFAYTCVLEETVRRCRRNWNWNHM
KQHRDTCRDYARAYQTKLTMKKLTKDIEEQLKHCESKLDIFNLVIIRQQIEMEVERLAEK
EKSLRAKRGWFGFLWTSSQAEETKELNSAAAIMRRFEEAMTPQEKEKLYRAIDYQENSAP
AHYPEAYEMIDTRFFLHGLQISLVDTDREHSCILDLQLHDVRAGFRSRPSANAILVTASI
SDMKLLGAMQDGRVPSLFISKHGSSDDSSLLSVSYEKNPLDKLCGHRVIVNSRSVDIVYD
AQTIIELVNMFKVQDSSTLSQLQTAAAEQLEGLKEMSALGLEYAIEKHSVLDIQVDMEAS
QLLIPHGGLYDDSKALIVVNLGSLKMHSLEKGKDDMTGASVKQLVSMGKSEQDILLHLRE
HSYDKFVLEIVNFQVLVSLPDEEWRTALACSESSLTLLHPTTLEIQFHKCLVTDDPLLPK
LRLLGRLPSVTVNIADVRLLQALCIVQSIRLPEEEKPPAELQRTSLSKSVSQLSLRELTT
GIIAEKKKHEAALPMKQTTDLEMKFEMSEFTLSMCRQNEAVTSEFVRFQVLQLEAEMLQR
TYDQEVLLRLGGVQMKQRHGDQEIFMINTPMSAGKDEYLIVVRYVNVNKRSPEFTTRHGS
VVKLLQLEFTSLDTLLHQEALIELLRFGTYIQDQMNSLSATTSPKKEVRATRPTNLTVIP
EETSGFLKEQLQKQRLWPAGRRKRSTVECIDLKVSAKIGSINLKISSSARDITALYVERI
SAGFLSKSSYSQVNVDLASVSVKDLNPSCAYKDIVAVEGTESLQVRMVMYNIEQWEVDKN
NMSVRVVMGCHRIVFLNAFVSGVMNFLNNFQAAQKAIRDASAAAAEAAKTNIKDVQESAS
RIELDIKIKAPVVYVPMNSKSEHSLMLDMGNLKICNVFKKLEVSNEESGECPIVDEMRIE
LQNLKLSRVRLNMKEFVSENEVLLLEPVTFTLLMKRNLSTAWFTSIPDIEMSGRLNRINL
LLSKEDYATILKVVEQNLSETFEEDAKVAQPALPAIKPEQGGEIQPAYRYEADASREPRT
TDTQQLHAHTSVKFEFIMDSLVINLYTGGSKLLQSQSSPLHLPENGLARFSLTHFAVKGR
VFADGLLATSILLMNCTLDDTRQNREGSLVRIMERTSVLPSGEDLDKEAKYTTRSMLDVT
VRQGPNDIFADVRVFSFSIIVSLDYLMKIKDFFDVDTANKSTAVAQPVSKKKQQQPSQQA
APSPKMLTVYLHVEKPDIILLEDMDDINSNCIVLNTELLLKVRIMGEHQVISGTVKDLSL
LTGIYNPTKRADWIYQVLKPCSISVAGSTPEGKGLHLDISCTDIHISVSPGVIEILNKVI
HMVTKKEEEDKEVVKPEPSYEGLWIITPFEENDYWFLKTEVATEALEEFTYSDDVTVYKP
ELALVSAPTILLTLEAGVGNKTLPMLLLYVGFQSNVNDWSTKTMSMDCTMSVVMEYYNSR
LALWEPLIEPIESCINGKRVSTSWELKTKVQFNDILLDSRGASATSPTSDSELDELHQST
KMSVDITSTDNLEITVTKTCLDVLKQLGQAFSSAMDASRKGPARKVAPFLLKNETGLGMI
LDLDHSPFKIFDDGSRMIRNDSDSYMEVILETGASIELAPKTTKSDTRLLEQLKGETVKD
RESNKFSVSFKGIQGKLAIPVLRADKRFFSLKHRKEGSEEWGIVSDVVVEEGSTIVTLRS
ILQVHNHFVQPISVYYMTKRGNEVECVGTVAPDEKLNLPLDAVYTPTNIYWLFFSVDGYM
VSVEPFVWKDLQKTVSMTKLLKCESRSKQDTTEPFYIQAVGEIEQVYFENTTRHTMASTI
YNVHLYPSVYLKNFLPIDIIICLPGTAQESLLEASASLQIPTIDPSKSHIIIKLPNYLEK
DWSCRVEILANPPEFAVWSFESFDSAQKVILDLGMHTSHKHGSIIMALYCPFWMLNKTGL
MLSYRKSSKGGKEHSSPIKTTDDHLNVLYHPEHFKGPILFSFRSKVFFGKKKAMIRVEDG
EWSDKFSIDVAGSEGVVACKYNGMTYQIGVHNQLTYNSLTKQITFTPYYILINNADFLIE
CQEGDRPADPMIKVLPGECAALWPRSEQENKTMKAKVSGQPEKTAAFVYTDSHTTLLKLD
NKYGGINVDVQINEGGVYISMSAYTPGNAPALIMNHTSYTINVWEKSSINVRSVQSFNRM
FYTWENPAGPRKIVWEDNNCKEIEDNLRKDNLGAFQLPDINEEIFYVSFLDGTQRVLLFT
TALKIAEDCQLAGDLEIIDQEITMNIHGIGFSLVNNITKSELLYMCIASSGIIWETCKNV
GGRWRALNAKEVNAIEEGYQHYLKELQINQEADYRIMLEPKLMVDYLHMEMLRPHRRYIR
RTFQTGLWLQYRTSAHQVQMHAKINRLQIDNQLSECVFPIILAPVPPPKSVTQSTVMKPF
AELSIVKRLLEHSNVQQFRYFKVLIQEFHIKVDIVFINAIMGLFEANEVNDAEESALFRS
DMELVNEPLMYHVSLITTAEQKNFFDLLHFSPLKIHISFSMTGSGGGPSALPQVLNVLLQ
GIGVTLTDINDIVFKLAYFERSYVFMTHKQLSSEATTHYAGQAIKQAYVLVLGLDVIGNP
YGLVVGTMKGIEDLFYEPFQGAIQGPGEFAEGLYLGVRSMLGHTVGGMAGAVSKITGAMG
KGIAALTFDKDYQRKRQEQLNKQPANLQEGIVRSGKGLVMGVVDGVTGVVMKPISGAKEE
GVEGFFKGFGKGVVGLVTRPTAGVIDFASGSLGAVRRATELSEETKKVRPPRFLQPDSLV
RSYIKDEAEGNKILMELDKGKYAPTDVYVYHVFINKDVLLLTDKRLSYLERSDLLGGWRV
DWTHTWNEFSELPKIVDRGVQIFTKDASKKKKLGNLFGSADQSKIILIADHNIKQLLCSK
MQEQMNQYGV
NT seq
9753 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcaatcgttgcggagctcctcaataaggtgctcggcgagtacattgaa
aacttggattattcacagctgaaacttagcctctggggaggcgatgttgtgttaaaggat
ttgttaataaaggagtctgcattggacgtgttagatcttccagtaagattggaatatggc
cgtctaggcaaattgatactaaagattccattcaaagatatgtggaacggccagatagac
gcgatagttgaggaactgttcgtactggtagtgcctacgagtcaagtttcgtacaatgaa
gaaaaagagatcaaagcacaattagaagccaaatgggcggagctcgcgagagtggagaag
agaaaacaactagcggacttaaagtcgcaagagaaactggacgactcgatggtcgagaag
ctgatcgctcgcatgatcaagaacattcacgtggagatcaagaggatccacgtgcgatac
gaggaccacgtcaccttcaagaatcatccgttctccgtcggcttcaccttgaataccttc
gtcctggagagttgcacggactcctgggagaccaccggcaatctcaaagacatgtacgcc
atcccacagatctacaagctgtgcggccttgacgggctagccgtctacctgaacacgagc
gtcgagcagtacagcaaaagctcgcattcgtcgtatcccggtctcttctgcgacggcatc
gccaccatggattacacaccggccgattatcaatatctactggggccgatcaacgtgaac
tccaagctcaggctcaatcccaaaccggagtccgacggcagcaactacacgatccccaag
gtgtggttggacctggagatgctgaagttgcgaatcggcctaaccaagcgccaatatcag
actttagtgcggctgggcgaaggcctcgaccaggcgcaaaaggccgctccgtaccgcaag
taccgacctaatctgatgtcctacaagagccactacaaagagtggtggcgtttcgcgtac
acttgcgtgctggaggagaccgtgaggcggtgccgtcgtaactggaactggaaccacatg
aagcagcaccgcgacacctgtcgcgactacgcccgggcctaccaaacgaagctgacgatg
aaaaagctgacgaaagatatcgaagagcagttgaagcactgcgagtcgaagctcgacatc
ttcaacctggtgatcatccggcagcagatcgagatggaggtggagcggctggcggagaag
gagaagagcctgcgtgcgaagcggggttggttcggcttcctgtggactagctcgcaggct
gaggagacgaaggagctgaactcggcagccgccatcatgcgcaggttcgaagaggcgatg
acgccacaggagaaggagaagttgtaccgggcgatcgattatcaggagaacagcgcaccc
gcgcattacccggaggcctacgagatgatcgacacgcgtttcttcctgcacggtctacag
atctccctggtggacacggacagggagcactcgtgtattctggacctgcagctgcacgac
gtgcgagcgggcttcaggtcgcggccgtcggccaacgccatcctcgtgaccgcctccatc
agcgacatgaagctgttgggcgcgatgcaggacggccgcgtgccttcgctcttcatctcg
aagcacggtagctccgacgacagctctctgctgtcggtctcgtacgagaagaacccgctg
gacaaactgtgcggccaccgggtgatcgtcaactccagatcggtcgacatcgtgtacgac
gcgcagacgataatcgagctggtcaacatgttcaaggtgcaggactcgtcgacgctgagc
caactgcagacggccgctgcggagcagctggagggcttgaaggagatgtcggcgctcgga
ctggagtatgccatagagaagcattccgtgctggacatacaggtggacatggaagcctcg
cagctgctcataccgcacggtggcctctacgacgattcgaaggcgctgatcgtcgtcaac
ctgggcagcctgaagatgcactctctggagaaaggcaaggacgacatgaccggcgccagc
gtgaagcagctggtcagcatgggcaagagcgagcaagatatattgctgcatttgagggaa
cacagctacgacaagttcgtcttggagatagtcaacttccaggtgttggtctcactgccg
gacgaggagtggcggacagcgttagcgtgcagcgagagctccctgacgttgctgcatccg
acgacgttggagatccagttccataagtgcctggtgacggacgacccgctgctgcctaag
ctcaggctcctcggccgcctgccgtcggtgaccgtgaacatagcggacgttcgcctgctg
caggcgctctgcatcgtgcagagcatccgcttgcccgaggaggagaagcctccggcggag
ttgcaacgcacttcgctctccaagtccgtctctcagttgtccctgagagaactcactacc
ggtatcatcgccgagaagaagaagcacgaggcggccctgccgatgaagcagaccaccgac
ctggagatgaagttcgagatgagtgagttcacgctgtccatgtgcaggcaaaacgaggct
gtgacgtcggagttcgttaggttccaggtgctgcagctggaagcggaaatgctgcagcgc
acgtacgaccaggaggtgctgctgaggcttggtggcgtgcagatgaagcaacggcacggg
gaccaggagatcttcatgatcaacaccccgatgtcggccggcaaggacgagtacctgatc
gtcgtgcgttacgtgaacgtgaacaaacgctcgcccgagttcaccacccggcacggctcg
gtcgtgaagctgcttcagctggaattcacctcgctggacactctgctgcaccaggaggcg
ctcatcgagctgctgaggtttggcacgtacattcaggaccagatgaactccttgtccgcg
acgacttccccgaagaaggaggtgcgcgcgacccgaccgaccaatttgaccgtcattccg
gaagagacgtctggtttcctgaaggaacagctgcagaaacagaggctgtggcctgccggt
cgacgtaaacgaagcacggtcgaatgcatcgacctgaaggtgagcgccaagatcggctcg
atcaacctgaagatctccagctccgccagggacatcaccgcgctgtacgtcgagaggatc
agcgccggcttcctcagcaagtcttcctactcgcaagtgaacgtcgacctggcctccgtt
agcgtcaaggatctcaaccccagctgcgcttacaaggatatcgtggcggtggaaggcacg
gagtccttgcaggtccgaatggtcatgtacaatatcgagcaatgggaagtggacaagaac
aacatgtccgtcagggtagtgatgggctgccatcggatcgtgttcttaaacgccttcgtc
tcgggcgtgatgaacttcttgaacaacttccaagcggcgcagaaggccatcagggacgca
tcagcggcggcggcggaggcggcgaagacgaacatcaaggacgtgcaagagagcgcctct
cgcatcgagctggacatcaagatcaaagcgccggtcgtttacgtgccgatgaattctaag
agcgagcacagcctgatgctggacatgggcaatctcaagatatgcaacgtcttcaagaag
ctcgaggtgtccaacgaggagtccggcgaatgtcccatagtcgacgagatgaggatcgag
ctgcagaacttgaagttgtcgcgagtccggctgaacatgaaggaattcgtgagcgagaac
gaggtgctgctgctcgagccggtgactttcacgctgctgatgaagcgcaacttgtcgacc
gcctggttcacctccatcccggacatcgagatgtccggcaggttgaacaggatcaatctg
ttgctgagcaaagaggattacgcgacgatcctgaaggtagtggagcagaacctgagcgag
accttcgaagaagacgcgaaagtcgcgcaacccgcgctaccggcgatcaagcccgagcaa
ggcggggagattcagccggcgtaccgttatgaggcggacgcctccagagagcctcggacg
acggacacgcagcagttgcacgcgcacacatcggtcaagttcgagttcatcatggacagc
ctggtgatcaatctgtacaccggcggctccaaactgctgcagtcgcagagttcgccgttg
cacctgccggagaacgggttggcccggttcagcctaacccacttcgccgtgaagggccgg
gtgttcgctgacggcctcctggccacgtcgatcttactgatgaactgcacgctggacgac
acgaggcagaacagggagggctcgcttgtgcggatcatggagagaactagcgtgttgccg
agcggcgaggacctcgacaaggaggctaaatacacaaccaggagcatgctggacgtgaca
gtgcgccaaggcccgaacgacatattcgccgatgtccgtgtgttctctttcagcatcatc
gtgtccctcgactacctcatgaagatcaaggacttcttcgacgtagacaccgccaacaaa
agcaccgccgtcgcgcagcccgtgtcgaagaagaagcagcagcagccgtcgcagcaagct
gctccgagccccaagatgttgactgtgtacctacacgtggagaagccggatatcatcctg
ctcgaggacatggacgacatcaactcgaactgcatagtgctgaacacggaactgctgctg
aaggtgcgcattatgggcgaacatcaggtgatcagcggcaccgttaaggatctctccctg
ttgacagggatatataatccaaccaagagagctgattggatctatcaggtgttgaaacct
tgtagcatcagcgtggccggttccacgcccgagggcaaagggctccacttggatattagt
tgtacggatattcacatctccgtttcgccaggtgtaattgagatattgaacaaggtcatt
catatggtgacgaaaaaggaggaggaggacaaggaagtcgttaagcctgagccgagttac
gagggactgtggatcatcacgcctttcgaggagaacgattactggttcctgaaaacagaa
gtcgcaacagaagctctcgaggaattcacgtactcagacgacgtaacggtttataagccc
gaattggcgctcgtctcagcaccgacgatcttgctgactctcgaggcgggtgtcggcaac
aagactctgcccatgctgttgctctatgtaggcttccagagtaacgtcaacgattggagc
acgaaaaccatgagcatggactgtaccatgtctgtggtcatggagtactacaacagccgg
ctcgcgttgtgggagccgttgatcgagccgatagagagctgcattaacggcaagcgcgtg
tccacgtcgtgggagttaaaaaccaaggttcaattcaacgatatattactggactccaga
ggtgccagcgcgaccagccccacctcggacagcgagttggacgagctgcatcagtctacc
aagatgtccgttgacatcacgtccactgacaatctggaaataacggtgacgaagacgtgt
ctggacgtactgaagcagctcggccaggcgttctcctcggccatggacgccagtagaaag
ggaccggcgaggaaagtggcgccgtttctactgaagaacgagactggcctagggatgata
ctggatctggaccacagtcctttcaagattttcgatgacgggtcgagaatgataaggaac
gacagcgattcgtacatggaagtgatcctcgagaccggggcgtcgatcgagctcgcgccg
aaaactaccaagtcggacacgcgtcttcttgagcaattgaagggggagactgtgaaggac
agggagagcaacaagttttctgtttcctttaaaggtatccaaggcaaattggcgatacct
gtgctaagggcggacaagaggttcttctcgttgaagcatcgcaaggagggctccgaggag
tggggcattgtgtcggatgtcgtcgtggaggagggcagtacgatcgtcactcttcgaagt
attcttcaggttcacaatcacttcgtgcagccgatatcagtttactacatgacgaaacgc
ggcaacgaggtggagtgcgtaggcacagtggcgccggacgagaagctcaacctacccctg
gacgccgtttacacccccacgaacatctactggctgttcttcagcgtcgacggatacatg
gtatcagtagaaccgttcgtctggaaggacctgcagaaaacggtttcgatgacgaagctg
ttgaaatgcgaatctcggtccaagcaagataccacagaaccgttttacattcaggctgtg
ggcgagatcgagcaggtgtatttcgagaataccactcgccacactatggccagcactatc
tataatgtacacttgtacccgtccgtgtacctgaagaacttcttgccgatcgacatcatt
atctgcctgcctggcaccgcgcaggagagcctgcttgaagctagtgcctctctgcagatt
cctacgattgacccatccaaatcacatataatcattaagctacctaattacttggagaaa
gattggtcgtgcagagttgagatcctggcaaatccaccggaatttgcagtctggtcgttc
gagtcctttgacagcgcacagaaagtaatcttggatcttgggatgcatacgtcccacaag
cacggctcgattatcatggcgctctactgccccttctggatgctgaacaagaccggcttg
atgctgtcgtataggaaatcaagtaaaggtggcaaagagcactcgagtccaatcaagacc
acggacgatcacctgaacgttctctatcatccggagcacttcaaggggcccattctcttc
tcgttccgctccaaagttttcttcggcaagaagaaggccatgatcagggtggaggatggc
gagtggtccgacaagttctccatcgatgtcgccggcagcgagggtgtggtagcctgcaag
tacaacggaatgacataccagatcggagtgcacaatcagctgacgtataactcgttgacc
aagcagatcacatttacgccatactacattctcatcaacaacgcggacttcctcatagaa
tgccaggagggcgaccgaccagccgacccaatgatcaaggtacttcccggcgaatgcgca
gccttgtggcctcgtagcgagcaagagaataagactatgaaggcgaaggtctcgggtcaa
cctgagaaaactgccgctttcgtttacacagacagccacacgactctgttaaaactggac
aataagtatggagggatcaacgtggacgtacagattaacgagggcggcgtttacatttcc
atgtcggcttacactccaggcaacgcgccggctttaattatgaaccatacatcgtacact
atcaatgtctgggagaagagttcgatcaacgtcaggtctgtgcagtcgttcaacaggatg
ttttacacctgggaaaatccagcgggcccacggaagatagtctgggaagacaacaattgt
aaagaaatcgaagacaatttgagaaaggataacctcggtgccttccaactgccggacata
aacgaggagatattctacgtgtcgttcttggatggcacgcagcgagtgcttctgttcacg
accgctctgaagatcgccgaggactgccaactggccggcgatctggagattatcgatcaa
gaaatcacgatgaacattcacggtatcggcttctccctcgtgaacaacatcaccaagtcc
gaattgttgtacatgtgtatcgccagctctggaattatatgggagacgtgtaagaacgtg
ggcggtcgatggcgagcgttaaacgccaaggaggttaacgccatcgaggaaggctatcaa
cactacctgaaggaactgcaaatcaatcaggaggcggattatcgaattatgttggagccg
aaactaatggtggattacttgcacatggagatgctgaggccacaccgcaggtatatacga
cgtaccttccagactggcctctggctgcaatatcgcacctcggcgcaccaggtccaaatg
cacgcgaagatcaatcgtcttcagatcgacaatcaactgtcggagtgcgtctttccgatc
atactggcaccggtgccgccgccaaagagcgtcacgcagagcacagtaatgaaaccgttc
gccgagctcagtatagtcaagcggctattggagcacagcaacgtgcaacaattccgctat
ttcaaagtgctcatacaagagtttcacatcaaggtagacatcgtcttcataaacgcgata
atgggtctcttcgaggcgaatgaagtgaacgacgcggaagaaagcgcgttattccgaagt
gacatggaactagttaacgagccgctgatgtaccacgtcagcctgatcaccacggccgag
cagaagaacttcttcgacttgttacacttctcgccactcaagatacacatcagtttctcc
atgaccggcagcggtggtggaccctcggcgttgccgcaagtacttaacgtgttgttgcaa
gggatcggcgtgacgctgacagatatcaacgacatcgtcttcaagttggcgtactttgag
aggagctatgtgttcatgactcacaagcaactctcctccgaagcgaccacgcattacgcg
ggccaggcgatcaagcaggcctatgtacttgtgctgggacttgacgttatcggcaatccc
tacggactcgtcgtaggaacgatgaagggtatcgaagacctgttttacgagccttttcaa
ggagccatacagggcccaggggagtttgcggagggtctgtatctcggggtgcgcagcatg
ctgggtcacaccgtcggcggaatggcaggcgctgtatcgaagatcacaggagctatgggc
aagggtatcgctgctctgacgttcgacaaggattaccaacgcaagaggcaagagcagctc
aacaagcaacccgccaatttgcaggaaggtatcgtgcgaagcggaaagggcttagtgatg
ggtgtagtcgatggtgtgaccggtgtggtgatgaagcctatatcaggagcgaaagaggaa
ggggtggaaggattcttcaaaggtttcgggaaaggcgttgttggtctcgtcaccaggcct
accgccggcgtgatcgactttgcgagtggctccttgggagcggttagacgggccaccgag
ctgagcgaggaaacgaagaaagtacggccgcctaggtttttgcagcctgacagtctcgtc
aggtcgtacatcaaagacgaagccgaaggcaataagatcttgatggaattggataaggga
aaatacgcacccaccgacgtctacgtatatcacgtgttcattaacaaagacgtgctactg
ctcaccgacaaaagattgtcgtatctcgagcgcagtgacttgttaggtggctggcgggtc
gactggactcacacctggaatgaattcagcgaattgccgaaaattgtagacaggggcgta
cagatcttcaccaaagacgccagcaaaaaaaagaagcttggtaatctgttcggcagcgcg
gatcagtcgaagataatcttaatagcagatcacaatattaaacagttattatgcagcaag
atgcaagagcagatgaatcagtacggcgtataa
DBGET
integrated database retrieval system
