Dinoponera quadriceps: 106744292
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Entry
106744292 CDS
T05610
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dqu
Dinoponera quadriceps
Pathway
dqu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106744292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dqu03019
]
106744292
Messenger RNA biogenesis [BR:
dqu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
106744292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
106744292
NCBI-ProteinID:
XP_014474435
UniProt:
A0A6P3X851
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MESSEDCDNEANTLQEDNIQQTENNAPPPSRLIPGFDTFVEYLEEAHDALKAGIKTANNL
PTGEHYDYYAFFQSFQDAKNRDVKRILATIQAIMKLAGSSGNIKHRDDDEKFDLLLETND
LLLDQANVWMDEESGILQNPEVQLVVSQIKRPTVNGSWNTKKATAVSDDSQNIRLLGGKN
VQKPQFMFKDKIDNSLKPWQPRIKEKPNNLKPLALYVEEGENGEVFNHPYAFELNKFETP
ECQLKKSVPVRYKSLDNTQLIFITAPSDIGIILEDLKNYKEIAVDLEHHSYRSFQGITCL
MQISTVDTDYLIDTLSLRSELHQLNEIFTKPTILKVFHGADLDIQWLQRDLSLYVVNMFD
THQAAKQLQFPYLSLAYLLKKYCNIDPNKHFQLADWRIRPLPEELMKYAREDTHYLLYIK
DLLKNELIESANGQNNILKAVYDMSTDICKRTYVKPIWTMESCKNMYRRSQKMFNNRQLY
AFKELHKWRDVTAREEDDSIGYVLPNHMLLNIAETLPREMQGILACCNPIPPFVRKNLLM
LHKIVLKAREQPLVKTIPEDDFRQRLAQRTHVANADVWIHSSHDIPKGTEARADLPCLLD
KVDTAWPVSSESVVMKHTVTLFDTSEDETENIKKPIFVSPFQRYKCVIPMIVELEAKELE
RQRKEEEEKRRGGDAAAEETNVESLDQAEISESKGRVYEHFKQVSQSSNEEVQGVFQKKK
KKKKKKKKNGNTEILLGQMHGRKRKRESGIARESVSQDRSDHHDFCTPAPSLDAKIRHMP
KKMRQEMRNAAEEQRVRENLAQVQGDRNTQAIQPIRSKKKGEKKATAKLLKQQGMLPSGK
FNYKEVDFNSFQGGSMQNNAVTQITQFQQPKQKKPRHRDWKKQFKVNI
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggaatctagcgaagattgcgacaacgaagcgaataccttacaagaggacaatatccaa
cagacggaaaacaatgcaccaccgccatcgcgtctcatacctggatttgatacgttcgtc
gaatatcttgaggaggcacacgatgcgctgaaagctgggatcaaaacagctaataatcta
cccaccggagaacactatgattattatgcgttctttcaaagtttccaagatgccaaaaac
agagatgttaaaagaatactggctacaatacaggccataatgaaattagcgggcagttct
ggtaacattaaacaccgagacgacgatgaaaagttcgacctcttattggagacgaatgat
ttgctacttgatcaggcaaatgtgtggatggacgaggagagtggtattctgcagaaccca
gaagtacagttggtcgtgtctcaaataaagagaccaactgtgaacggcagttggaacacg
aaaaaggccaccgcggtctcggacgattctcagaatatacgtttgctgggtgggaaaaac
gtgcagaagccacagttcatgttcaaggacaagatcgacaatagcttgaaaccctggcag
ccgcggatcaaggagaagccaaacaacctgaagccgcttgctctttacgtggaagaaggg
gagaacggcgaggtcttcaatcatccttacgcgttcgagttgaacaagttcgagacgcca
gagtgtcagctgaagaaaagcgtgccggtgaggtacaagtcgctggacaacacgcagctg
atatttatcaccgcgccgtccgacatcgggatcatcttggaagacctgaagaattacaaa
gagatagccgtggacttggagcatcactcttacagatcttttcagggcataacctgcctg
atgcagatatcaacggtggacaccgattacttgatcgacacgctgtctctgcgatcggag
ttacatcagctcaacgagatcttcacgaaacccacgatcctgaaggtctttcacggcgct
gacctagacatacagtggcttcagagggatctgtcgctgtacgtagtgaacatgttcgat
acccatcaggcagcgaaacagctgcagttcccctacctcagtttagcttacctgctgaag
aagtactgcaacatagatcccaacaagcactttcagttggccgactggcgtatacgacca
ctgccggaagaactgatgaaatacgccagggaggatacgcattatctgctttacataaag
gacctgttgaagaacgagctgatcgagtcggctaacgggcagaacaacatcctcaaggcc
gtgtacgacatgtccacggacatctgcaagcggacgtacgtcaagccgatctggacaatg
gagagctgcaagaacatgtacaggaggagccagaaaatgttcaacaacaggcagctgtac
gcgttcaaggaattgcacaagtggagggacgtcaccgcgagagaggaggacgacagtatc
ggctacgtgctgcccaatcacatgttgctcaacatagcggagacgttgccgcgcgagatg
caaggtattctggcatgttgcaatccgataccgccgtttgtgcgaaagaacctgctgatg
ttgcacaagatcgtgctgaaggccagggagcagccgctcgtgaagaccataccggaggac
gatttccggcagagactagcacaacggactcatgtggcgaatgccgacgtctggatacat
tcgtcgcacgacataccgaagggcacggaggccagggcggacttgccatgtctcttggat
aaggtcgacacggcctggcctgtgtcgagcgagagcgtcgtgatgaaacacactgtgaca
ttgttcgacacatcggaggatgaaacggagaacattaaaaagccgatattcgtgagtccc
tttcagagatacaagtgcgtaataccgatgatagtcgagctggaggcaaaggagctggaa
agacagcggaaggaagaagaggaaaagcgtcgggggggcgacgctgccgctgaagagacc
aacgtggaaagcctggaccaagccgagattagcgagagcaaagggagggtgtacgaacac
ttcaaacaggtatctcagtcatcgaatgaagaagttcagggtgtgtttcagaagaaaaag
aagaagaagaagaagaagaagaagaacggcaacacagagatactcctgggtcagatgcac
ggtaggaagaggaagagggagtctggcatcgcaagagaaagtgtgagtcaggataggagc
gaccatcacgacttctgcacgcccgcgccgtccttagacgccaaaatccgacacatgcct
aagaaaatgaggcaggagatgcgaaatgcggctgaagagcagagagtccgggagaatctc
gcgcaagttcagggcgataggaacactcaggcgattcaaccgatcaggtccaagaagaaa
ggagagaagaaggcgaccgcgaagctgctgaagcaacagggtatgctgccgtcggggaag
ttcaattacaaggaggtggacttcaacagcttccaaggcggcagtatgcagaacaacgca
gttacgcagataacacagtttcagcagccgaagcaaaagaaaccaagacatcgggactgg
aagaagcaattcaaagtgaacatatga
DBGET
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