KEGG   Dinoponera quadriceps: 106745038
Entry
106745038         CDS       T05610                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
dqu  Dinoponera quadriceps
Pathway
dqu03013  Nucleocytoplasmic transport
dqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106745038
  09122 Translation
   03013 Nucleocytoplasmic transport
    106745038
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dqu03019]
    106745038
   03041 Spliceosome [BR:dqu03041]
    106745038
Messenger RNA biogenesis [BR:dqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     106745038
Spliceosome [BR:dqu03041]
 Complex C
  Other components
   EJC/TREX
    106745038
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    106745038
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_EML Beta-prop_HPS5 eIF2A RMC1_N Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N NBCH_WD40 PAC11 DSE1_N Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_ELP1_1st B-prop_COPA_B_2nd TRM82_WD Beta-prop_EIPR1 Peptidase_S9_N PROPPIN PD40 Beta-prop_DCAF12 Beta-prop_Nup120_160 Cytochrom_D1
Other DBs
NCBI-GeneID: 106745038
NCBI-ProteinID: XP_014475764
UniProt: A0A6P3XD10
LinkDB
Position
Unknown
AA seq 322 aa
MATVTAGVEELISYFKTHNKIREQQSHSAKVHSVGWSCDGKLLASGSFDKSVCIFSLGPD
RLKQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANIGTRGENINI
SWSPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVH
ILSYPELKLLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLEW
PVRTISFSYDGQLLAAASEDLVIDIGEVETGEKIADIAVEAATFTVAWHPKQYLLAYACD
DKDTYDRKRDAGSLKVFGFANE
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgactgttacggctggagtggaggagttaattagttattttaaaacccacaacaaa
atccgcgaacagcagagccattcggcgaaagttcacagtgtaggatggagttgtgatggc
aagttactagcttcaggctctttcgacaagtctgtctgtatattttcactgggtcctgat
cgtttgaagcaagaaacaactttcagaggacacggcggtagcgtggatcaactctgctgg
catgcattttatccagaattattatccacagcgagcggagataagactgttcgtatttgg
gacacaaggacacagaaatgcacagcaaacatcggcaccagaggagagaacatcaacata
tcttggtcaccggatggcaataccatcgcagtaggaaacaaggaagacctggttaccttc
atcgatgctagggtaatgaagatacgtgcagaggaacagttcaattttgaggtgaacgag
atctcttggaacaaggactcggatactttttacctaacaaacggccaaggctgcgtccac
atactcagttatcccgaattgaaattgttacacgtaatcaaggcgcatccaggtacatgc
atttgcatcgagttcgacccaaccggtcggtactttgctacaggatccgcagatgcgttg
gtctctttgtgggacgccgacgaattgtgctgcctgagaacattttcaaggctggagtgg
cccgtccggactatttccttctcgtacgatggtcaactactggcagctgcctcggaagac
ttggtcattgacatcggtgaggtagagactggtgaaaagattgccgatattgcagtggag
gcggcaacttttaccgttgcctggcatccgaaacagtacctcctggcttacgcgtgtgac
gacaaagatacgtacgatcggaaacgcgatgccggcagcttaaaggtgtttggcttcgcc
aatgagtga

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