Dinoponera quadriceps: 106746357
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Entry
106746357 CDS
T05610
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dqu
Dinoponera quadriceps
Pathway
dqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106746357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dqu03041
]
106746357
Enzymes [BR:
dqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106746357
Spliceosome [BR:
dqu03041
]
Complex C
Other components
Step II factors
106746357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
SLFN-g3_helicase
ResIII
AAA_16
ABC_tran
T2SSE
ATPase
AAA_24
Sigma54_activ_2
Sigma54_activat
PhoH
cobW
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
106746357
NCBI-ProteinID:
XP_014478385
UniProt:
A0A6P3XIU9
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MNDPSLYRLEGTDTSQTGGLVIRKKASDHTFKKPETSVLGLDKLAERKRREQSQEPTSSK
SKSEGKDRRYRSYKEETPTHTGGVNYEAQRQLESRLKRQRLNDDRSSRNSHRDRERDRDR
RRDRESRSRDSVRQTPLRFRDEPQTPKFRTKDPTSKSNWDDDEDEEPKRSSWDHPTPNIY
GNREGRDSVRSEFTPSYKYNPWNKDPKNSGATPMIDGEEKEMWEEEQQRLDREWYALDDG
ENNAFANVSEEYTRKKEMELEARRQKRVSAQQRQINKDNELWERNRMLTSGVVSSLEHDD
DPDDEGEARVHLLVHNVVPPFLDGRIVFTKQPEPVVPVRDPTSDMALVARKGSALVRAYR
EQKERRRAQKKHWELAGTHIGNIMGVHDRRKDDKELAGQETDFKAGQKYARHIGAGEVTG
EAKHRSIQHQRRSLPVFAVRQELLNVIRENSVVVIVGETGSGKTTQLTQYLHEDGYSRNG
IIGCTQPRRVAAMSVAKRVSDEMATALGDKVGYAIRFEDCTSKDTVIKYMTDGILLRESL
REGDLDRYSVIIMDEAHERSLSTDVLFGLLREVVARRHDLKLIVTSATMDCSKFSAFFGN
AATFQIPGRTFPVEVLHAKNPVDDYVDAAVKQVLQIHLQPKSGDVLVFMPGQEDIEVTCE
ALKERLAEIESAPPLSILPIYSQLPSDLQAKIFQRSEGGLRKCVVATNIAETSLTVDGIV
FVVDSGYCKLKVYNPRIGMDALQVYPVSRANADQRSGRAGRTGPGQCYRLYTRRQYLDEL
LLTGVPEIQRTNLANTVLLLKSLGVQDLLAFHFMDPPPQDNILNSLYQLWILGALDHTGR
LTPLGRQMAEFPLDPPQCQMLIVASQLGCTADILIIVSMLSVPSIFYRPKGREEDSDSAR
EKFQVPESDHLTYLNVYNQWKANGYSSSWCNDHFIHAKAMRKVREVRSQLEEILKQQKMD
VVSCGTDWDVVRKCICSAYFHQAARLKGIGEYVNCRTGMPCHLHPTSALFGMGFTPDYVV
YHELVMTAKEYMQCVTAVDGHWLAELGPMFFSVKETGRSGRAKRRQAMQHLHEMEHQMKE
AEEEMKARAQEQLEREQASVRKKEILTPGIREPGTPAPYRNTPGRLGL
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacccgagcttgtaccgattagaagggaccgatacgagccaaaccggaggtctg
gtcatccgtaagaaagcttcggaccacactttcaagaaaccggaaacgtctgtgttaggc
ctcgacaagctcgcggagcgtaagaggagggagcaatcgcaggaacccaccagctcgaaa
tctaagtccgaaggtaaggaccgaaggtatcggtcttacaaggaagaaactcccacccac
acaggcggtgtgaattacgaggcgcaacgacaactggagtctcggctcaagcgtcagaga
ctgaacgacgaccggagttcgaggaattctcaccgagaccgcgagagagatcgcgacaga
cggcgggacagggagagcagaagcagagacagcgtgaggcagactccgctcagattcagg
gatgagccgcagacaccgaaattccgtacgaaggatcctacctccaagagcaactgggac
gacgacgaggacgaggagccgaaacgctcgagctgggaccacccgactccgaacatctac
ggcaaccgggagggccgcgacagcgtcaggagcgagttcactccctcctacaagtacaat
ccttggaacaaggacccgaagaattccggcgccacgccgatgatagacggggaggagaag
gaaatgtgggaggaggagcagcagaggctggacagggagtggtacgcgttggacgacggg
gagaacaacgcgttcgccaacgtgtccgaggagtacacgcggaagaaggagatggagctg
gaagcgaggaggcagaagcgcgtctcggcgcagcaacggcagataaacaaggacaacgag
ctgtgggagcgcaaccgtatgctaacgtcgggtgtcgtgagctccctggagcacgacgac
gaccccgacgacgagggggaggcgagggtgcacttgctggtgcacaacgtggtgccgccg
ttcctcgacgggcggatcgtgttcacgaagcagccggagccggtcgtgcctgtgcgcgac
cccacctccgacatggccctggtagcgaggaaaggctcggcattggtgcgggcgtaccgc
gagcagaaggagcgacgtagggcgcagaagaagcattgggagctggctggcacgcacatc
ggcaacatcatgggcgtgcacgaccggcgcaaggacgacaaggaactcgcgggacaggag
acggacttcaaggccgggcagaagtacgcccggcacataggagccggcgaggtgacggga
gaggcgaaacacaggtccatccagcatcagagaaggagcctgccggtgttcgcggtgcgt
caagaactgctgaacgtcatccgggagaacagcgtcgtcgtgattgtcggcgagaccggt
agcggcaagaccacgcagttgacgcagtatcttcacgaggacggttacagtcgcaacggt
ataatcggttgcacccagccgaggagagtcgccgccatgtccgtcgcgaagagagtgtcc
gacgagatggccactgccctaggcgacaaggtcggatatgcgatacgtttcgaggactgt
acttccaaagatacggtgatcaagtatatgaccgatggtattttgctgcgagagagtttg
agggaaggagatctggaccgttacagtgtaattataatggacgaggctcatgaacggtcg
ctttctacggacgtgttgttcggtctccttagagaggtcgttgccaggcgacacgatctc
aagctgatcgtgacttccgcgacgatggactgcagcaagttctccgctttcttcggcaac
gccgcgacgttccagatacccgggcgcacgttccccgtggaggtgttgcacgcgaagaac
ccggtcgacgattacgtggacgcggctgtgaagcaggtcttgcagatccacctgcaaccc
aagagcggcgacgtgctggtcttcatgcccggtcaggaggacatcgaagtcacctgcgag
gccctgaaagaacgtttggccgagatcgagtcggcaccgcctctctcgatactgccgatt
tactcgcaattaccgtcggacctgcaggcgaagatcttccagcgctccgaaggtggcctt
cgcaagtgcgtcgtggcgaccaacatcgcggaaacgtccctgacggttgacggaatcgtc
ttcgtcgtcgactcgggatactgcaagttgaaagtgtacaatccgcggataggtatggac
gctttgcaggtgtaccctgtatcaagagctaacgccgatcagagatccggtagagcgggt
cgtaccggtcccggtcagtgctaccggctgtacacgcgaagacaatatctggacgagtta
ctgctgaccggagtgccggagatacaacgtacgaacttggctaacacggtgctgctgctg
aagtccctgggagtccaagatctattggcgttccacttcatggacccgccgccgcaggac
aacatcctcaattccctgtaccagttgtggattttgggcgcgctcgaccacaccggccgc
ttgactcctctcggccggcagatggcggagttcccgttggacccgccgcaatgtcaaatg
ctcatagtcgcttcccagctcggctgtaccgccgacatcctcatcatagtctccatgctc
tcggtaccgtcgatcttctatcggccgaagggccgcgaagaggactcggattcggcgcgt
gaaaagttccaggtgcctgagtccgatcatctgacctacctgaacgtgtacaaccagtgg
aaggcgaacgggtattcgagttcctggtgcaacgaccacttcatccacgcgaaggcgatg
cgcaaggtgcgagaggtgcggtcgcagctcgaggagatcctgaagcagcagaagatggac
gtggtcagctgcggcaccgactgggacgtcgtgcggaagtgcatctgctcggcgtacttc
caccaagcggcacgtctcaagggtatcggcgagtacgtcaattgtcgcaccgggatgccg
tgccacctccatccgacctcggctctcttcggcatgggcttcacgcccgactacgtagtc
tatcacgagcttgtgatgacggccaaggagtacatgcagtgcgtcaccgcggtcgatggc
cactggttggccgagctgggccccatgttcttcagcgtgaaggagaccggccgaagcggc
cgcgccaagcggcggcaagcgatgcagcacttgcacgagatggagcatcagatgaaggag
gccgaagaggagatgaaggcgcgcgcccaagaacagctcgagcgcgagcaagcctcggtc
cggaagaaggagatcctgacgcccggcatcagagagcccggcacccccgctccgtatcgc
aacactcctggaagattgggcctgtaa
DBGET
integrated database retrieval system
