Dinoponera quadriceps: 106746532
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Entry
106746532 CDS
T05610
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
dqu
Dinoponera quadriceps
Pathway
dqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106746532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dqu03019
]
106746532
Messenger RNA biogenesis [BR:
dqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106746532
U7-dependent histone pre-mRNA processing factors
106746532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
UPF0242
Motif
Other DBs
NCBI-GeneID:
106746532
NCBI-ProteinID:
XP_014478690
UniProt:
A0A6P3XJS9
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MTSIIKLHAISGAMDESPPCYILQVDELRILLDCGWDENFDQDFIKELKRHVNQIDAVLL
SYPDPLHLGALPYLVGKCGLNCPIYATIPVYKMGQMFMYDMYQSRHNMEDFDLFTLDDVD
AAFDKIVQLKYNQSISMKGKGYGVTLTPLPAGHMIGGTIWKIVKVGEEDIIYAVDFNHKK
ERHLNGCELERLQRPSLLITDAFNATYQQARRRTRDEKLMTNILQTLRGGGNVLVSVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSMAELNQVPSPKVVLASTPDMECGFSRELFLQWCTNPQNSIILTSRTS
PGTLARDLVEKGGNRNITLEVKRRVKLEGIELEEYQKKEKLKQEQLKQEQMEIADVSSES
EDEIEVGGVRGKHDLLVKQESKPGFFKQSKKQHPMFPFVEEKIKIDEYGEIIKPEDYKIA
ETLPEIEDNKENVEMKQEETSHHPEIAADIPTKCIQVSRTMTVNAAVTYIDFEGRSDGES
LQKILAQLRPRRVVLVRGSFKDTEILAQQAQSAGARVFVPARGETLDATTETHIYQVRLT
DALVTGLNFSKGKGDSEVAWIDAMITARDQVCRDAVADTESDDAIMDESDKILTLEPLPL
NEVPGHQTTFINELKLSDFKQVLNKSNISSEFSGGVLWCCNNTIAVRRHEAGKVILEGCI
SEDYYKVRELLYQQYAIV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattataaaacttcacgctatttctggagcaatggatgagtctccaccttgt
tatatattacaagttgacgagttgagaatattattagattgcggatgggatgagaacttt
gatcaagattttataaaagaattgaagagacatgtcaatcaaatagatgcagtattactt
tcatatccagatccgttacatctgggtgcattgccatacttagtaggtaagtgtggtctg
aattgtcctatttacgccaccatacctgtatacaaaatgggccaaatgtttatgtatgac
atgtaccagtcccgccacaatatggaagactttgatttatttaccttagacgatgttgat
gccgcattcgacaagatagtacagttgaaatacaatcaaagcatatcgatgaaaggtaaa
ggctacggtgttacattgacaccattgccagcaggacacatgattggtggtacaatctgg
aaaattgtcaaagtaggagaggaggacataatatatgctgtggactttaatcacaaaaag
gagcggcatttaaatggttgcgagttagagagattgcaaaggccgtcattgttaataaca
gatgcatttaacgccacataccagcaagcccgacgaagaacgagggacgagaagctgatg
actaatatcttgcagacgttgagaggtggtggcaatgtattggtcagcgtggataccgct
ggccgtgtattagaattagcgcatatgctggatcagctgtggcgcaacaaggagtcgggg
ttactcgcttactcattggccctccttaacaatgtaagttataacgtcgtggaatttgcg
aagtcgcaaatcgagtggatgagcgataaattaatgaggagcttcgaaggtgcacgcaac
aatccgttccaatttaaacacctgcaactttgccatagcatggccgagctgaatcaagtt
ccaagcccgaaggtggtactcgcaagcaccccagacatggagtgtggattttcccgagag
ttattcctccagtggtgcactaacccgcaaaacagcattatattaacaagtagaacgtct
ccaggtactcttgctagagatctggtggagaaaggtggaaaccgaaacatcacgttggag
gtaaagagacgagtgaagctggagggtatcgagctggaggaatatcagaagaaggagaaa
ttaaagcaagaacaattgaaacaggaacaaatggagattgcagacgtgagttccgaatcg
gaagacgagatagaagtaggcggtgtccgagggaagcacgatttattggtgaagcaagag
agcaagcccggcttcttcaagcaaagtaaaaagcaacatcccatgttcccgttcgtggag
gagaagattaagatagacgagtacggagagattataaaaccggaagattacaagatcgcg
gagaccctgcccgaaatcgaggacaataaggagaatgtggagatgaagcaggaagaaacc
agccatcacccggagattgccgcggatatcccgaccaagtgtatacaggtgtcgcgcacg
atgaccgtcaacgctgcggtaacctacatcgactttgaaggtagatccgacggggaatcc
ctgcagaaaatcctggcacagttgagacccaggagggtggttttagttaggggctcgttc
aaggacacggagatattagcgcagcaagcacagagcgcaggtgcaagggtgttcgttcct
gccaggggagagacgctggacgccacgacggagacgcacatttatcaggtacgtttgacc
gacgctctagtcaccgggctgaacttctcgaagggcaaaggcgattccgaagtagcgtgg
atagacgcgatgataacggcgcgtgatcaagtctgccgagacgctgtcgctgacaccgag
tccgatgatgcgataatggatgagagcgacaaaatactgactttggagcctctgccgctg
aacgaggttcccggtcaccagacaacgttcataaacgaattgaagctgtcggattttaaa
caagtcttgaacaaaagtaacatctcgtcagaattcagcggaggggtactgtggtgttgc
aacaacaccatcgctgttagaaggcatgaagctggaaaggtgatactggaaggttgcatt
tctgaggactactacaaagtacgggagctgttgtatcagcaatatgcaatcgtgtag
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