KEGG   Dinoponera quadriceps: 106748480
Entry
106748480         CDS       T05610                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
dqu  Dinoponera quadriceps
Pathway
dqu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dqu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106748480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dqu03019]
    106748480
Messenger RNA biogenesis [BR:dqu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106748480
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     106748480
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 106748480
NCBI-ProteinID: XP_014482509
UniProt: A0A6P3XX13
LinkDB
Position
Unknown
AA seq 291 aa
MAEIPLSLGEKTFILHGIDTGFRNDGRQRYEYRSIEIETRLMPHAHGSARLRIGNTDVLV
GVKVEIDTPHADKPEEGKLDFFVDCSANATPAFEGKGGEDLATEISNLLSLAYQTSETFD
LRQLCILPHKKCWKMYVDILILQCGGNLFDAVGAAVKAALYNSEIPRVIAATLDGGEPDI
QLSDDLYDCVKLDVTNYPIVITVCKIGDNCVVDPTSEEESCSTASLIMSVMPNGKMTSVV
KMGYASLQPTTLIKMLEVGKSVAHKLNQALLKGLAAEDKLGRSRQICGFLR
NT seq 876 nt   +upstreamnt  +downstreamnt
atggccgagattcctctgagcttaggcgagaagacgtttattctccacgggatagacacc
ggtttcagaaacgacggacggcagagatacgaatatcgttccatagagattgaaaccaga
ctgatgccgcacgcacacggatcggcacgattgagaataggcaacacggacgtgttggtc
ggcgtgaaagtggagatcgacaccccgcacgcggacaaacccgaggaaggcaaacttgac
ttcttcgtggactgctccgccaatgccacaccagcgtttgaaggcaaaggaggagaagac
cttgcaaccgagataagcaatctcctgtccttggcttaccaaacatccgaaaccttcgac
ctgaggcagttgtgcatactacctcacaagaagtgttggaaaatgtacgtggacattttg
attctacaatgcggcgggaatctattcgacgcggtaggcgccgcggtgaaggctgcgttg
tacaacagcgagatcccgagggtaatcgcggcgacgctcgacggcggtgaaccagacatt
cagctgtcggacgatctttacgattgcgtcaaactggacgtgacgaattatccaatagtg
ataacggtgtgcaagatcggcgacaactgcgtggtggatccaacgtcggaggaggaatca
tgcagcaccgccagcctcatcatgtccgtgatgccgaatggcaagatgacgtccgtagtc
aagatgggatacgccagtctgcagcctaccaccttaattaagatgctagaggtgggaaag
agcgtcgctcacaagctgaaccaagctctcctgaaaggattggcggcggaggataagctc
ggccgatcgcggcagatatgtggctttcttagataa

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