Dinoponera quadriceps: 106749029
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Entry
106749029 CDS
T05610
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dqu
Dinoponera quadriceps
Pathway
dqu03020
RNA polymerase
dqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106749029
09124 Replication and repair
03420 Nucleotide excision repair
106749029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dqu03021
]
106749029
03400 DNA repair and recombination proteins [BR:
dqu03400
]
106749029
Enzymes [BR:
dqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106749029
Transcription machinery [BR:
dqu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106749029
DNA repair and recombination proteins [BR:
dqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106749029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
106749029
NCBI-ProteinID:
XP_014483548
UniProt:
A0A6P3Y002
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MATSDSKAPLRTVKRVQFGILSPDEIRRMSVTDTGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFLTKTIKILRCVCFYCSKLLVSPQNPK
IKEVIMKTKGQPRKRLTHIYDLCKSKNICEGGDEMDINKENAENQQPLDRKPGHGGCGRY
QPNLRRSGLDVTAEWKHVNEDSQEKKIVLTAERAWEILKHIKDEESFILGMDPKFARPDW
MIVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELLRNEQSGAAAHVISENI
KMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQVLVRRGNSQYPGAKYIVRDNGERI
DLRFHPKSSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNMHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRK
MTKRDVFIEKEQMMNLLMFLPSWDGKMPQPCILKPKPMWTGKQLFSLIIPGNVNMIRTHS
THPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGR
FYGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLP
TIKVSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNRDRAVLR
EIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKDLLDKCIIVAGDD
RLSKQANENATLLFQCLVRSTLCTKVVSEEFRLSGEAFEWLIGEIETRFQQAQVSPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKI
SPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDN
KFQETDEEPMDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETG
EFKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHA
EVDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKAGIEIPIAVGAGVMGSAGMFFGSVP
GISSMSPQMTPWMGATPGYGASSMSPAMSSGMTPGGACFSPSGASDASGMSPAYSAYSPQ
PGSPGSPGPSMSPFPMSPAGAASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPAS
PTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETED
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcggactcgaaggcgcctttgcgtactgtcaagcgggtgcaatttggcatt
ctttcgccagatgaaatccgtcgcatgtctgtcacggatactgggatccgtttcccagaa
accatggaaggtggccgtccaaaactgggtggcctcatggatccaagacagggtgtcatt
gataggaattccagatgccaaacatgtgctggaaatatgacagaatgtcctggtcatttt
ggtcatatagatcttgcgaaaccagtatttcacgtgggattcttgacgaagactattaag
atattgagatgtgtatgcttctattgttctaagctgctcgtcagtcctcaaaatcccaaa
ataaaagaagtcatcatgaaaacgaaggggcagccgcggaagaggcttacgcacatttac
gatctgtgcaagagcaaaaacatttgcgaaggtggggacgagatggatatcaacaaagaa
aatgcggagaaccagcagccgttagacagaaaacccggtcacggcggctgtggccgttat
cagccgaacctcaggagatccggcttggatgtcacggcggaatggaagcacgtgaacgag
gattcgcaggagaagaaaatagtgctcacggccgagcgagcctgggagatcctgaagcac
atcaaagatgaggagtccttcattctgggcatggatccgaagtttgcccggccagattgg
atgatagtcactgtgttgccggtaccaccgttgtcggtgaggccggcggtaatcatgtac
ggctccgccaagaatcaagacgatctgacccacaaattggcggacataataaagtcgaac
aacgagttgttgcgcaacgaacagtccggcgcagcagcgcacgtgatatcggagaacatc
aagatgttgcagttccacgtggcaaccctggtcgacaacgatatgcccggcatgcctagg
gcgatgcagaagtctggcaagccgttgaaggcaatcaaagccagattgaagggaaaagaa
ggcagaatccgaggtaacttgatgggtaagcgtgtagatttctccgcacgtaccgtcatc
acgccagatcccaacttgcggatcgatcaagtgggcgtgccgcgcagcatagcacagaac
ttgacattcccggagattgtgacgcccttcaacatcgacaagatgcaggtgctggttaga
cgtggcaattcgcaatatcccggcgcgaaatacatagtccgcgacaacggcgagaggatc
gacctgcgtttccacccgaagtcgtctgatctgcatctacagtgtggttaccgggtggag
cgacacatccgtgacggcgatttggttatcttcaatcgccagccgactctgcacaagatg
agtatgatgggccatcgtgtcaaggtgttgccatggagtacattccgtatgaatctgagc
tgcacgtccccgtacaacgcagacttcgacggcgacgaaatgaacatgcatgtgccgcag
tcgatggagactcgcgccgaagtggagaacatccacgtgaccccgcggcagatcatcacg
ccgcaggcgaacaaaccggtcatgggtattgtgcaggataccctgacagccgtgaggaag
atgacgaagcgcgacgtcttcatcgagaaagagcagatgatgaatctgctcatgttcctg
ccgagctgggacggcaagatgccgcagccgtgtatcctgaagccgaagccgatgtggacc
ggcaagcagctgttctcgctcatcattccggggaacgtgaacatgatacggacgcacagt
acgcatccggatgaggaggacgacggcccgtacaagtggatctcgccgggcgacaccaag
gtcatggtggagcacggcgagcttgtgatgggtattctttgcaagaagacgctgggtaca
tctgccggatctctccttcacatctgcatgttggagttgggccacgaggtgtgtggacgt
ttctacggtaacatccagaccgtgattaataactggctgctgctcgagggccactcgatc
ggtattggcgacaccatcgccgatccgcagacttacttggagatccagaaggcgattaag
aaggcgaaggaggacgtgatagaggttatacaaaaggcgcacaacatggagctggagccc
accccgggtaacacgctgcgtcagaccttcgagaaccaggtgaacagaatattgaacgac
gctcgtgacaagaccggaggctccgccaagaaatcccttaccgagtacaacaacctgaag
gccatggtggtgtcgggctcgaaaggctccaacattaacatctctcaggttatcgcttgc
gtgggtcaacagaacgtcgagggtaagcgtataccgttcggctttcgcaaacggacactg
ccgcacttcatcaaggacgattacgggccggagtcccgtggcttcgtcgagaattcgtat
ctcgctggtctcacgccgtccgagttctactttcacgcgatgggcggtcgtgaaggtctc
atcgataccgccgtgaagacggccgagacaggttacatccaacgtcgtctgatcaaggct
atggagtcggtgatggtgcattacgatggcaccgtgaggaactccgtcggccagctgatc
cagctgcgttacggcgaggacggcctctgcggtgagactgttgagttccagaacttgccc
accatcaaggtgagcaacaaggccttcgagaagaagttcaagtttgacccgaccaacgag
cgatacctcaggcgtatattcaacgaggacatcgtccgagagatgatgggctccggcgag
gtgatctccgagctcgagagagagtgggagcagttgaacagggaccgcgccgtcctccgc
gagatcttccccagcggggaatccaaggtggtgttgccctgcaatctgcagaggatgatt
tggaacgtgcagaagatattccacatcaacaaaagagcgccaactgatctcagccccatg
agagtgattcaaggcgtgaaggatcttttagataaatgtattatcgtcgccggggatgac
cgactcagcaaacaggcaaacgaaaacgcaacattattgttccagtgtctcgtaagatca
accttgtgtacgaaagtcgtctccgaggaatttaggctttccggcgaagccttcgaatgg
ttgatcggcgaaattgaaacgcgattccaacaagctcaggtgtcacccggagaaatggtc
ggtgccttggcggcgcaatcactcggcgagccggccacgcaaatgaccctgaatactttc
cattttgccggtgtgtcgtcgaagaacgtaactctcggtgtaccgaggctgaaggaaatc
attaacattagtaagaaaccgaaggcaccgtcgttaacggtctttctgacgggcgccgcg
gcgcgcgacgccgagaaagcgaagaacgtgctctgccggctggaacatacgaccctgaag
aaggtgacggccaacaccgcgatctactacgacccggatccgcagaacacggtgatcgcg
gaggaccaggagttcgttaacgtgtactacgagatgccggacttcgaccctacaaagata
tcgccgtggctgctgcgtatcgagctggacagaaaacgcatgaccgacaaaaagctgact
atggagcaaatcgccgagaagatcaacgccggcttcggcgacgacctcaactgcatattc
aacgacgacaatgccgaaaagctggttctgcgtatcagaataatgaacagcgacgacaat
aagttccaggaaacggacgaggagccgatggacaagatggaggacgatatgttcctgcgg
tgtatcgaggccaacatgctcagcgacatgactcttcagggtatcgaagcgattggaaaa
gtgtacatgcacttgccgcaaacggactcgaaaaagcgcatcgttatcacggagaccgga
gagttcaaggcaatcgctgagtggctcttggaaacggacgggacgagcttgatgaaagtg
cttagtgaacgcgacgtcgaccccgtgcggacattcagcaacgatatctgcgagatattc
caagtgctcggcatcgaggctgtgcgtaagtccgtggagaaggagatgaacgccgtattg
cagttctacggcctctacgtgaattaccgtcatctcgctttactttgcgacgtcatgacg
gcgaagggtcatcttatggccatcactcgtcatggaatcaacaggcaggacacgggcgct
cttatgagatgttccttcgaagaaacagtcgacgtgttgctggacgccgcttctcacgca
gaagttgacccaatgcgaggagtatctgagaatattataatgggtcagcttccacgcatc
ggaacaggttgtttcgatctactgctggacgccgagaaatgcaaagctggcattgaaatt
cctatagcggtcggcgcgggcgtgatgggatcggctggaatgttcttcggcagtgttcct
ggcatatccagcatgagtcctcaaatgacaccgtggatgggagctactcccggttatgga
gcgtcgagcatgtcacctgcaatgagcagcggtatgacgcccggaggtgcctgtttctca
ccgtcgggcgcttcagacgcgtcgggcatgtctccggcctactctgcctactcgccgcaa
cctggtagtcctggtagtccaggtcccagcatgagcccattcccgatgtcgccggcgggc
gccgcctcgcccagctattcgcccacttcgcccgcgtacctgcccacgtcgcccagcatg
acaccgtcgagcccgaactactcgcccacgagtccaacgtactcgccaacgagtcctaac
tactcgccgacgtccccgagttactcgccgacgtcacccagctactcgcccacgtcgcct
agctactcgcccacgtcgcccagctactcgcccacctcgcccagctactcgccgacgtcg
cccagttactcaccaacgtcgccgagctattcgcccaccagcccgagttactcgcccacg
tcgcccagttattcaccgacgtcgccgagctactcgcccaccagtccgagttactcgcct
acgtcaccgagttactcgcccaccagtccgagttactcgcccacgtcgccgagttattcg
ccgacgtcgcctagctactctccgacgtcaccgagctactcgcccagctcgccgaactac
acgcccgcctcgccgagttactcgccgacctcgccgagctactcgcccagctcgccgcag
tattcgccggccagtcccagctactctcccagcagccccaaatactcgcccacctcgccg
agctactcgcccacttcaccgtctttcgccggcacgtcgccgcagtacacacccgcgagt
cccacgtactcgcccaccagtcccacgtattcgccgaccagtccgtcgtactcgcccagt
tcgccgcagcataccgcgtccggtagcaccaggtactcgccgagcagtccgaactattca
cccaccagtccgacttactcgcccacgagcccgcagtactcgccatcgagcaccaagtac
tcacccacctctcccacttacacaccgaccagtccgagttactcaccgacgagtccgacg
tattcgccgccggtaccggggtattcgcccacgagccccacgtattcgccggcgtcgccc
gcgtacgagacagaagattaa
DBGET
integrated database retrieval system
