Dinoponera quadriceps: 106752359
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Entry
106752359 CDS
T05610
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dqu
Dinoponera quadriceps
Pathway
dqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106752359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dqu03041
]
106752359
03009 Ribosome biogenesis [BR:
dqu03009
]
106752359
Enzymes [BR:
dqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106752359
Spliceosome [BR:
dqu03041
]
Complex A
U2 snRNP components
U2 related factors
106752359
Complex B
106752359
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
106752359
Ribosome biogenesis [BR:
dqu03009
]
Eukaryotic type
90S particles
Helicases
106752359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
ResIII
AAA_25
T2SSE
Flavi_DEAD
ABC_tran
AAA_7
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
106752359
NCBI-ProteinID:
XP_014489494
UniProt:
A0A6P3YHS7
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MSKRRIEVVDPYVKRRADGSTTSNNNPAAAASTATKSQVQFNPYTMLPYTPKYYELYKKR
ITLPVFEYRTDFMRLLNQHQCIVLVGETGSGKTTQIPQWCVEYSRGIGNKGVACTQPRRV
AAMSVAQRVSEEMDVALGQEVGYSIRFEDCSTARTVLKYMTDGMLLREGMSDPMLDAYQV
ILLDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRT
HPVEIFYTPEPERDYLEAAIRTVIQIQMCEEIVGDLLLFLTGQEEIEEACKRIKREMDNL
GPEVGELKCIPLYSTLPPNLQQRIFEPAPLNKSNGAIGRKVVVSTNIAETSLTIDGVVFV
IDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAYKNEMQD
NTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLT
DLGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMK
FAHIDGDHLTLLNVYHSFKQHLDDVQWCYDNYVNYRSLKSGDNVRQQLSRIMDRFVLKRT
STDFNSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQVVQLHPSSCLDHKPEWVIY
NEFVLTTKNYIRTVTDIKPDWLLMIAPQYYDLQNFPQCEAKRQLEVIQAKLDSKQYQEGF
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgcaggatcgaggttgtggacccgtacgtcaaacgaagagcagatggctcg
acaacgtccaacaataatccggcggcggcggcgtccacggcgacgaagagccaagtgcag
ttcaatccgtacaccatgctgccgtatacgccgaagtactacgagctgtacaagaagagg
ataaccctgccggtcttcgagtatcgcactgactttatgagactgttgaaccagcatcaa
tgcatcgttctcgtcggtgagaccggttccggcaagaccacgcagataccgcagtggtgc
gtggagtattcgcgaggtatcgggaacaagggggtcgcgtgtacgcagccgaggagagtg
gccgcgatgagcgtggcgcagagagtgtcagaggagatggacgttgccttaggtcaagag
gtgggatacagcattcgtttcgaggattgcagcaccgcgaggaccgtgttgaagtacatg
accgatggtatgttgctgcgcgaaggcatgtccgacccaatgctggacgcgtatcaggtg
atactgctggacgaggcgcatgagaggacacttgccactgacttgctcatgggtgttctg
aaggaagtgatcaagcagaggccagacctgaaactcgtcattatgagcgccaccttggac
gccgggaagttccaacagtacttcgacaacgcaccccttatgaacgtgcccggccggact
catccggtcgagatattttacacaccagagccggagagggattacctggaggccgcgatc
agaacggtcatacagattcagatgtgcgaggagatagtcggggatcttttgctgtttctc
accggtcaggaggagatcgaagaggcgtgtaagaggatcaagagagagatggacaacctg
gggcccgaggtcggcgaactgaagtgcataccgttgtactcgacgttaccgccgaatctc
cagcagagaatattcgagcccgctccgctcaacaagtcgaacggcgccatcggccgtaaa
gtcgtcgtctcgaccaacatcgccgagacatcgctaaccatcgacggtgtcgtctttgtg
atagacccgggcttcgccaagcaaaaagtgtacaacccgagaattcgcgtagagtcactc
ctggtgtcgcccatcagtaaggcgtcggcgcaacaaagagccggtcgggccgggagaacg
aaaccgggcaaatgtttcagattatacacggaaaaggcgtacaagaatgagatgcaggat
aacacgtatccggagattttacgatccaacctcgggagtgtcgttctacaactgaagaaa
ctcggtattgacgatctggtgcatttcgactttatggacccgcctgcacccgagacgctc
atgagagctctggagcttttgaattacctggccgctctcgatgacgacgggaacctgacg
gatctcggggcggttatggcggagttcccattggatccccagctggcgaaaatgctcata
gcgtcgtgcaatcataactgcagtaacgagatactcagcatcaccgcaatgctctcagtc
ccacagtgctttgtgaggccgaacgaatcgaagaaggccgcggatgatgcaaaaatgaaa
ttcgcccatatcgatggtgatcatctcacgttactcaatgtgtaccattccttcaaacaa
catttggacgacgttcaatggtgttacgataattacgtgaattatcggtcgttgaaaagc
ggggacaacgtgaggcagcagttgagccgaataatggacagatttgtattgaaacgcacc
tcgactgacttcaattccaaggattactacatcaacatcagaaaagctctcgttaatggc
ttttttatgcaggtggcacatttagaaagaacaggacattatctcactattaaggataat
caggtggtgcaacttcacccgagcagttgtctggatcacaaaccagaatgggttatttat
aacgagttcgtgctcaccacgaagaattacatcagaacagtcaccgatattaaacccgat
tggttgctcatgatagcgccgcagtattacgatctacaaaatttcccacagtgcgaggcg
aaaagacagctggaagtgatacaggcgaaactagactcgaagcagtatcaagaaggcttc
taa
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