Deinococcus radiodurans: DR_1126
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Entry
DR_1126 CDS
T00025
Name
(GenBank) single-stranded-DNA-specific exonuclease, putative
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dra
Deinococcus radiodurans
Pathway
dra03410
Base excision repair
dra03430
Mismatch repair
dra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DR_1126
03430 Mismatch repair
DR_1126
03440 Homologous recombination
DR_1126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_1126
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DR_1126
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DR_1126
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DR_1126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_C_Deinoc
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AAF10698
UniProt:
Q9RVA3
LinkDB
All DBs
Position
1:1134718..1136772
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AA seq
684 aa
AA seq
DB search
MAAVREGKRIRIHGDYDADGVSATATLVLGLRAIGANVHGFIPHRLNEGYGIHPDRVPEH
AAAADLVVTVDCGVSNLDEVKSLLATGTEVVVTDHHAPGENFPECLVVHPHLTPDYDPDR
HNLTGAGVAYHLLWAVYEELGRPEPRALLPLATLGTVADVAPLLGENRALVRAGLAEMAR
TELPGLRALMNEKRVRQPTARDVAFILAPRINAAGRMGEADRALELLTTPSDHEAKSLAA
YLEIRNQERRKIQDDMFAQALQLADPNDPALVLTHDDWHAGVMGIVASKLVETFNRPVYI
VAQGKGSVRSTPGISAVQGLRESRDLLGRFGGHPGAAGFSLDPQNFGALRERIHGYVRQF
PTPVPAVRLDAPLPVAALTPELLSELSILEPFGEGNPRPLWHLRGPLTDTRLVGKQGDVL
QFRFGGVKGMKYSERDDAAGERDVAAELALNEWKGRTSLELHAAALRPLAPLALAGTEEG
LPTLPRLNPREAMTFLKTGAAAYAEQGVATYLRDNVPGLTLLDTNAPHPGGDLILYGLPP
ESALRRWLHEAQEQGGRVAFALGPKTLAELDAALTLAKLLPDSHTEAAQEAAADAYRSWQ
WAHHYRVLNDAGWSASVYAMLGLPVPAALPKRRKRWRSLRVKASVRLPAARSTPGRFRVR
LPAVRGRGSAAPVPLPYRAREWFH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcggtgcgcgagggaaagcgcatccgtattcacggtgactacgacgccgacggg
gtgagtgcgactgcgactctggtgctgggcctgcgcgccatcggggcgaatgtgcacggg
ttcattccccaccgattgaacgagggctacgggattcatcctgaccgggtgcctgagcac
gccgccgctgccgatctggtggtcacggtggactgtggggtgtccaacctcgacgaggtg
aagtcgctgctggcaacgggcactgaggtcgtggtcaccgaccaccacgcgccgggcgag
aactttcccgaatgtttggtcgtccacccccatctgacgccggactatgaccccgaccgc
cacaatctgaccggggccggagtcgcctatcacctgctgtgggcggtgtacgaggaactg
gggaggcccgagccgcgtgcattgttgccgctggcgacgctgggcacggtggccgacgtg
gcgccgctgctgggtgaaaaccgtgctctggtccgcgccgggctggccgaaatggcccgc
accgagttgcccggtctgcgcgccctgatgaacgaaaagcgcgtgcggcagcctacggcg
cgtgacgtggcctttatcctcgcgccgcgcatcaatgcggctgggcggatgggggaggcg
gaccgggcgctggagctgctgaccacgcccagcgaccacgaagcgaagagcctggccgcc
tacctggaaattcgcaaccaggagaggcgcaagattcaggacgatatgttcgcgcaggcg
ctgcaactcgccgacccgaacgacccggcgctggtgctcacccacgacgactggcatgcg
ggcgtgatgggcatcgtggcgagcaagctggtggagacgttcaaccggcccgtgtatatc
gtcgcgcagggcaaaggctcggtgcgctccacccccggcatcagtgcggtgcagggcctc
cgcgaaagccgcgacctcctggggcgcttcggcgggcaccccggcgcggcgggcttttcg
ctggacccgcagaattttggcgcgctgcgcgagcggattcatgggtatgttcggcagttt
ccgaccccggtcccggcagtgcggctagatgccccgctgcctgtggcggccctgaccccc
gagctgctgtccgagctgagcattctggaacccttcggcgaaggcaacccgcgcccgctg
tggcacctgcgcgggccgctgactgacacccgattggtgggcaagcagggcgacgtgctg
caattccggttcggtggcgtcaaaggcatgaaatacagcgaacgcgacgacgctgcgggc
gaacgtgacgtggcggcagaacttgccctcaacgagtggaagggccggacctccctggaa
ctgcacgcggcggcgctgcgcccgctggctcccctcgcgctggcaggaactgaggagggg
ctgcccaccctgccccggctcaatccccgtgaggcgatgaccttcctgaaaacgggcgcg
gcggcctacgccgagcagggcgtcgccacctacctgcgcgacaacgtaccgggcctcacc
ctgctggacacgaacgcgccgcaccccggcggtgacctgatcctgtacggtttgcccccc
gagtcggccctgcgccgctggctgcatgaggcgcaggagcagggaggccgggtggcgttt
gcgctgggaccgaagacgctcgcagagctcgacgctgccctgacgctggcgaagctgttg
cctgactctcacaccgaggccgcgcaggaagctgccgctgacgcttaccgcagctggcag
tgggcgcaccattaccgcgtgctgaacgacgcggggtggagcgcctcggtctacgcgatg
ctcgggctgcctgtaccggcagcgctcccgaagcggcggaagcgctggcgctcgctgcgg
gttaaagcctcagttcgccttcctgctgcacgttcaacccctgggcgatttcgtgtgagg
cttcctgccgttcgcggtcgaggtagtgctgcgcctgtcccacttccttatcgagcacgc
gaatggtttcactga
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