Deinococcus radiodurans: DR_1374
Help
Entry
DR_1374 CDS
T00025
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dra
Deinococcus radiodurans
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dra03032
]
DR_1374
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_1374
Enzymes [BR:
dra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DR_1374
DNA replication proteins [BR:
dra03032
]
Prokaryotic type
DNA Topoisomerases
DR_1374
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DR_1374
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Mur_ligase_C
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AAF10943
UniProt:
Q9RUL0
LinkDB
All DBs
Position
1:1378605..1381670
Genome browser
AA seq
1021 aa
AA seq
DB search
MGGPSVGQPQGKGPAGAAGRCVYAHRNFKPPAKVLTMPMPKTSPSKTLVIVESPAKAKTI
EKYLGQGYAVESSVGHIRDLPRSAADIPEKYKGQAWARLGLDVEHDFQPLYVVSPEKKQK
VAQLRKLAAEADEIILATDDDREGESIAWHLYQELKPKVPVKRMVFHEITREAIQAAIAA
PRQIDRNLVEAQEARRAVDRLYGYEVSPVLWRKVAPKLSAGRVQSVATRMLVERERERMR
FVAATWWDVVVTAQALTAQAGEQTFPARLTEVQGERLAAGKDFDPLTGQLRPGAGVRLLG
EAEALAISEGLKGQTLKVLTAEEKPFTSRPPAPFITSTLQQEGSRKLRMSAQTTMRTAQR
LYEGGYITYMRTDSTNLSSEAVNAARGQVKDMYGAPYLSPQPRVYAKKSKNAQEAHEAIR
PAGSTFRTPEQLRGELSGDEWRLYDLIWKRTVASQMSDARGRSLRVRLGGQTASGQTADS
VPVVLNASGRTIDFPGFLRAYVEGSDDPAAALEDRDTPLPPLKXGDAVRAQDVKAEDHET
QPPARYTEASLVQALEGAGIGRPSTYASILGTIQDRGYALKKGTALVPSWTAFATSALLE
HHFGTLVDYDFTAKMEEDLDEIAGGREHRVPYLRRFYLGEEGEGMALKPLIERQMGEIDA
RGIATIKVPKLEGSGIEVRVGRYGPYMQRGEDKANLPEGMTPDELTLEVAEELFSRPQGD
RVLGEDPESGHPVLARAGRYGPYVTLGNENPPLRSASLFPGEKLEDMTLERALQLLTLPR
LIGTSEGEEVWAHNGKFGPYLKRGSDSRSLATHEQLFTVTLPEAEALFQQPKFRGRGVAA
APLATYEYEGRTPILLKSGRFGPYLTDGEKNATLRKGEDLNTLDPQRARDILEERGKEPQ
KKPGKAGTKKAAASKAPAKAAASKTAPKKAAAKPAAKKAAPKKAASKSAKTPAAKAAPLT
WAQLKPFVGVLSEPERALVTATREQGRKVEDVAPELGLDVKKAKGMALQASKKLNQAARG
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtcccagtgtaggccagccgcagggcaaaggtcccgctggggcagcgggcagg
tgcgtgtacgctcaccgcaacttcaagcccccagcgaaggtcctgactatgcccatgccc
aaaacttccccgtccaaaacgctggtgatcgtcgagtcgcccgccaaggccaagaccatc
gagaagtacctcggtcagggctacgccgtcgagtcctcggtcggccacatccgtgacctg
ccgcgcagcgccgccgacattcccgagaagtacaaggggcaggcatgggcgcggctcggt
ctcgatgtcgagcacgactttcagccgctgtatgtcgtctcgcccgagaaaaaacagaag
gtcgcgcagctgcgcaagctcgccgccgaggccgacgaaatcatcctggcgaccgacgat
gaccgcgagggcgaaagcatcgcctggcacctgtatcaggaactcaagcccaaggtgccg
gtcaagcggatggtgtttcacgaaatcacccgcgaggcgattcaggccgcgattgccgcc
ccccggcagattgaccgcaatctggtcgaggcgcaggaagcccgccgcgcagtggaccgg
ctctacggctacgaggtcagcccggtgctgtggcgtaaggtcgcgcccaagctctcggcg
ggccgggtgcagtcggtggcgacccggatgctggtcgagcgtgagcgtgagcggatgcgc
ttcgtggcggcgacgtggtgggatgtggtggtcacggcccaggcacttaccgcgcaggct
ggggagcagaccttccccgcccggctgaccgaggtgcagggcgagcggctggcggcgggc
aaggacttcgacccgttgaccggacagttgcggcccggcgcgggcgtgcggctgcttggg
gaagccgaagcactcgccatctccgaggggctgaaggggcagacgctcaaggtgctcacg
gcggaggaaaagcccttcacctcgcgtccgcccgctccttttattacgtccaccttgcaa
caggaaggcagccgcaagctgcggatgtcggcccagacgaccatgcgcacggcgcagcgg
ctctacgagggcggctacatcacctatatgcgcaccgactccaccaacctcagcagcgag
gcggtgaacgcggcgcgcggtcaggtcaaggacatgtacggcgcaccgtacctctcgccg
cagccccgggtgtacgccaagaagtcgaagaacgcgcaggaggcccacgaggcgattcgc
ccggcggggagcaccttccgcacgccggagcaactgcgcggcgagctgagcggcgacgag
tggcggctctatgacctgatctggaagcggacggtggcctcgcagatgtccgacgcccgg
ggccgtagcctgcgcgtgcggctgggtggccaaactgcaagtgggcagacggcggacagc
gtgcccgtcgtgctgaacgcctcgggccgcaccatcgatttccctggtttcctgcgggct
tatgtggaaggcagcgacgaccccgccgccgcgcttgaggaccgggacacgccgctgccg
ccgctgaaanccggggacgcggtgcgggcacaggacgtgaaggccgaggaccatgaaacg
cagccccctgctcgctacaccgaggccagtctggtgcaggccctcgaaggcgcgggcatc
gggcggccctcgacctacgcgagcatcctggggaccattcaagaccggggctacgcgctg
aaaaagggcacggcgctggtgccgtcgtggacggcgtttgcgacctcggcgctgttggag
caccatttcggcacgctggtggactacgacttcaccgccaagatggaagaggacctcgac
gaaatcgcgggcgggcgcgagcaccgcgtgccctacctgcgccgcttctacctcggtgaa
gagggcgaggggatggcgctcaagccgctgattgagcggcagatgggcgagatcgacgca
cgcggtattgccaccatcaaggtgccgaagctcgaaggcagcggcatcgaggtgcgagta
ggccgctacgggccgtacatgcagcgcggcgaggacaaggccaacctgcccgaaggcatg
acgcccgacgaactgacgctggaagtcgccgaggaactgttcagccgtccgcagggcgac
cgggtgctgggcgaagacccggagagcggtcacccggtcctggcccgcgccggacgctac
ggtccttacgtgacgctgggcaacgagaacccgccgctgcgttcggcgagcctcttcccc
ggcgagaaactggaagacatgacgctggagcgggcgctgcaactgctcacgctgccccgg
ctcatcggcaccagcgaaggtgaagaggtctgggcgcacaacggcaagttcgggccgtac
ctcaagcgcggcagtgactcgcgcagtctggcgacccacgaacagcttttcacggtgacg
ctgcccgaagccgaggctctgtttcagcagcccaagttccggggccggggcgtggccgcc
gcgccgctcgccacctacgagtacgaaggccgcacgccgattctgctcaagtcgggccgc
ttcgggccgtaccttaccgatggcgagaaaaatgccaccttgcgtaagggcgaggacctg
aacaccctcgacccgcagcgggcacgtgacattctggaagagcgcggcaaagagccgcag
aagaagcccggcaaggcaggcacgaaaaaggcggcagcgagtaaggcccccgctaaagct
gcggccagcaaaactgcgcccaagaaagcggcagccaagccagcggcgaaaaaagcggca
ccgaaaaaggccgccagtaaatctgctaaaactccagccgccaaagccgcaccgctgacc
tgggcgcaactcaagcccttcgtgggcgtgctgagcgagccggaacgcgcgctggtcacg
gccacccgcgagcagggccgtaaggtagaggacgtggcccccgaactcggcctggacgtg
aaaaaagccaagggcatggcgctgcaagcgagcaagaagctgaatcaggcagcgcggggc
ggataa
DBGET
integrated database retrieval system
