Deinococcus radiodurans: DR_1902
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Entry
DR_1902 CDS
T00025
Name
(GenBank) exodeoxyribonuclease V, subunit RecD, putative
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dra
Deinococcus radiodurans
Pathway
dra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DR_1902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_1902
Enzymes [BR:
dra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DR_1902
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DR_1902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
OB_YrrC
AAA_11
HHH_5
TraI_hel_assoc_N
AAA_22
nSTAND3
AAA_28
AAA_16
PhoH
AAA
NAT10_TcmA_helicase
NPHP3_N
MeaB
NTPase_1
KTI12
ETF_alpha
AAA_18
DUF815
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AAF11453
UniProt:
Q9RT63
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:complement(1919913..1922060)
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AA seq
715 aa
AA seq
DB search
MSAALPAEPFRVSGGVNKVRFRSDTGFTVMSATLRNEQGEDPDATVIGVMPPLDVGDTFS
AEVLMEEHREYGYQYRVVNMVLEAMPADLSEEGVAAYFEARVGGVGKVLAGRIAKTFGAA
AFDLLEDDPQKFLQVPGITESTLHKMVSSWSQQGLERRLLAGLQGLGLTINQAQRAVKHF
GADALDRLEKDLFTLTEVEGIGFLTADKLWQARGGALDDPRRLTAAAVYALQLAGTQAGH
SFLPRSRAEKGVVHYTRVTPGQARLAVETAVELGRLSEDDSPLFAAEAAATGEGRIYLPH
VLRAEKKLASLIRTLLATPPADGAGNDDWAVPKKARKGLSEEQASVLDQLAGHRLVVLTG
GPGTGKSTTTKAVADLAESLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGYGPQGFR
HNHLEPAPYDLLIVDEVSMMGDALMLSLLAAVPPGARVLLVGDTDQLPPVDAGLPLLALA
QAAPTIKLTQVYRQAAKNPIIQAAHGLLHGEAPAWGDKRLNLTEIEPDGGARRVALMVRE
LGGPGAVQVLTPMRKGPLGMDHLNYHLQALFNPGEGGVRIAEGEARPGDTVVQTKNDYNN
EIFNGTLGMVLKAEGARLTVDFDGNVVELTGAELFNLQLGYALTVHRAQGSEWGTVLGVL
HEAHMPMLSRNLVYTALTRARDRFFSAGSASAWQIAAARQREARNTALLERIRAH
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgccctgcctgccgagccgtttcgagtctccgggggggtcaacaaagtccgt
ttccgctccgacaccggctttaccgtcatgagtgccacgctgcgcaacgagcagggcgag
gaccccgacgccaccgtgattggcgtcatgccgccgctcgacgtgggcgacaccttcagc
gccgaggtgctgatggaagagcaccgcgagtacggctaccagtaccgggtggtcaacatg
gtgctggaagccatgcccgccgacctgtccgaggagggcgtggcggcttacttcgaggcg
cgggtgggcggcgtgggcaaagtgctggcggggcgcatcgccaagaccttcggcgcggcg
gccttcgacctgctcgaagacgacccacagaagttcttgcaggtgcccggtatcaccgag
tccaccctgcacaagatggtgagcagttggagccagcaggggctggagcggcggctgctc
gcgggcttgcagggcctcgggctgaccatcaatcaggcgcagcgggcggtcaaacatttc
ggggccgacgcgctcgaccggctggaaaaagacctctttacgctgaccgaagtcgagggc
atcggctttctgaccgccgacaagctctggcaggcccgcggcggcgcgctcgacgacccc
cgccgcctgaccgccgccgccgtgtacgcgctgcaactcgccgggacgcaggccgggcac
agcttcctgccgcgctcgcgggccgaaaaaggcgtggtccactacacccgcgtcacgccg
gggcaggcgcgactggcggtggaaacggcggtggaactcgggcggctctcggaagacgat
tcgccgctctttgccgcagaagccgccgctaccggcgagggccgcatttacctgccccac
gtcctgcgcgccgagaaaaagctggcgagcctgattcgcacgctgctcgccaccccgcct
gccgacggcgcgggcaacgacgactgggccgttccgaaaaaggctcgcaagggcctctcg
gaagagcaggcgagcgtgctggaccagctcgcggggcaccggctggtcgtcctgaccggc
ggccccggcaccggcaaaagcacgacgacgaaggcggtcgctgacctcgccgagtcgctg
gggctggaagtcggcctctgcgccccgaccggcaaggcggcgcggcggctgggtgaggtg
acgggccgcaccgccagtaccgttcaccggctgctcggctacgggccgcagggcttccgg
cacaaccacctcgaacccgcgccgtatgacctcctgatcgtggacgaggtgagcatgatg
ggcgacgcgctgatgctctcgctgctcgccgccgtgccgccgggggcgcgggtgctgctc
gtgggcgacaccgaccagttgccgccagtggacgccgggctgccgctgctcgcgctcgcg
caggcggcccccaccatcaagctcacgcaggtctaccgtcaggcggccaagaaccccatt
attcaggcggcgcatggcctgctgcacggcgaggccccggcgtggggcgacaaacggctc
aatctcaccgaaatcgagcctgacggcggcgcccggcgcgtggcgctgatggtgcgcgaa
ctcggcggccccggcgcggtgcaggtgctcacgccgatgcgtaaagggccgctgggcatg
gaccacctcaattaccacttgcaggcgctgttcaaccccggcgagggcggcgtgcggata
gccgagggcgaggcgcggcccggcgacacggtggtgcagaccaaaaacgactacaacaac
gagattttcaacggcacgctcggcatggtcctcaaggccgagggcgcgcggctgacggtg
gatttcgacggcaacgtggtggaactgaccggcgccgaactgttcaacctgcaactcggc
tacgcgctgaccgttcaccgcgcccagggcagcgaatggggcacggtgctcggcgtgctg
cacgaggcgcacatgccgatgctctcgcgcaatctggtgtacacggcgctcacccgcgcc
agagaccgctttttttcagccgggtcggcctcggcatggcagattgcggcggcccggcag
cgtgaagcgcggaatacggcgctgttggaaagaatcagggcgcattaa
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