Deinococcus radiodurans: DR_1922
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Entry
DR_1922 CDS
T00025
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dra
Deinococcus radiodurans
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_1922
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DR_1922
Archaeal homologous recombinant proteins
DR_1922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AAF11474
UniProt:
Q9RT44
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All DBs
Position
1:1942746..1945475
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AA seq
909 aa
AA seq
DB search
MKPLHLTLRGFTAFRQTTDLDFADLELFALVGPTGSGKSSLLDAMTFALYGETARLGATG
LDALISQGERTLSVALTFEAGGQTYRVTRTRGRKQADNEVRLDRLDPDGEWTGLSSGSQK
DIAQRIEDVVGLDFDTFTRCVMLPQGQFAALLHGKPRQRQELLGELTGMGRVQQMQTFAA
DQVKDFKHQSQSLSSVLASEYAGVSEEAAAAVRAQREQTDADAERLLQQREELRTQLQRC
ANXXSLSSREDTARRLTVQESRXEGVRQGAERARRARQVAGVLPLLDAAERARIAYDRQT
RELAGAESALQSAQAQAARADAALTQAQAQEPRIPELEEQANALREAEADAARLKRAGGS
VQATHANPLPWDEDAFETAREAAQKLEKLRVERSILESEKAALKAALERYAQEERQQQEE
TAQLERVKADGLKAKEQLQVAQQREEEARMEAGLASYRSHLHEGEPCPLCLQTVHEVPEG
ESVDLDELRGQVNLLQKLVQERREHFTDLRGQLKTRQLWLDEKKSEYHDWNERNKQRELD
ARELERHISGNPQDDLQRLLASLAGRVRQAGANPAQARRDRLAEIQSIRSRIQEAQAALS
RAQGDLAAAQATAQPRSMGGEREADHLAAADALTKALASLNLTAEAARTAGLPENEIAAL
EEGARKHEAEVAQLRAALADLDRQLGLEAFDPAHLAQVSRDLTASDAALSTAREQAGRLA
EQERQLRDKLTRKADIETQAAEAGRQLDTWQTLNNALKVNEFQQFMLAEVEAQLLTRAGL
LLFDISDGRYRLSLDKGEYVVQDLWNAGEVRAVKTLSGGETFLASLSLAIALSDYLAGNK
VLGALFLDEGFGTLDPQALEAVATALENLRTQGRMVGIVTHVESLSERLPSRLLVSKSMA
GSNVIRVDG
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgctgcacctcaccctgcgcgggtttaccgccttccggcagaccaccgacctc
gatttcgccgacctcgaactgttcgcgctcgtcgggccgaccggcagcggcaagtccagc
ctgctcgatgcgatgaccttcgcgctctacggggagacggcgcggctcggcgccaccggg
ctcgacgcgctgatttcgcagggtgagcggacgctgagcgtggcgctgaccttcgaggcc
ggcggacagacctaccgcgtcacccgcacgcgcgggcgcaaacaggccgacaacgaggtg
cgactcgaccgcctcgaccccgacggcgaatggaccggcctgagcagcggctcgcaaaag
gacatcgcgcagcgcatcgaagacgtggtggggctggatttcgacaccttcacccgctgc
gtgatgctgccgcagggccagttcgccgcgctgctccacggcaagccccggcagcgccag
gaactgctcggcgagctgaccggcatgggccgcgtgcagcagatgcagactttcgccgcc
gaccaggtgaaggactttaagcaccagtcgcagagtctgagcagcgtgctggcgagcgag
tacgccggggtgagcgaagaagccgccgccgccgtgcgcgcccagcgcgagcaaaccgac
gccgacgccgagcgactcctccagcagcgcgaggaattgcgaacccaactgcaacgctgc
gcgaacagkwaaagtctgtccagccgcgaggacaccgcccgccgcctgaccgtgcaggaa
agccgtsccgagggcgtgcgccagggagccgagcgggcccgccgcgcccggcaggtggcc
ggggtgctgccgctgcttgacgccgccgagcgcgcccgcatcgcttacgaccgccagacc
cgcgaactcgccggggccgagagcgccctgcaaagtgctcaggcccaggccgcccgcgcc
gacgccgcgctgacgcaggctcaggcgcaggaaccccgcattcctgagctggaggagcag
gcgaacgccctgcgcgaagccgaggccgacgccgcccgccttaaacgggccgggggcagc
gtgcaggcgacccatgccaacccgctgccgtgggacgaggacgccttcgagacggcgcgt
gaggcggcgcagaagctggagaagttgcgggtggagcggtcaatcctagaaagcgagaag
gccgcgctgaaagctgccctggagcgttacgcgcaggaagagcggcagcaacaggaagaa
acggctcagctggaacgggtcaaagcagacggtctgaaagccaaggaacagcttcaggtc
gcccagcaacgcgaggaagaggcgcggatggaggcggggctggcctcttaccgttcgcat
ctgcatgagggcgaaccgtgcccgctgtgcctgcaaaccgtccatgaggtgccggaaggc
gaaagtgtcgatctggacgagttgcgcggtcaggtcaacctgctgcaaaagctggtgcag
gagcggcgcgagcatttcaccgacctgcgcgggcagctcaagacccggcagctgtggctg
gacgaaaaaaagagcgaataccacgactggaacgagcgcaacaagcagcgcgaactcgac
gcccgtgagctggaaagacacatttccggcaatccgcaagacgacctccaacgcctcctc
gcctcgcttgcgggccgggtgcggcaggccggggccaaccccgcgcaggccagacgagac
cggctggccgagattcagtccatccgcagccgtattcaggaggcacaggccgcgctctcg
cgtgcccagggcgacctcgccgccgcgcaggccaccgcgcagccgcgcagtatgggcggc
gagcgcgaggccgaccacctcgccgctgccgacgcgctgacgaaggccctcgcctcgctg
aatctgaccgccgaggccgcccgcaccgccggcctgcccgaaaacgagattgccgcgctg
gaagagggcgcccgcaagcacgaggcggaagtggcgcaactgcgggccgcgcttgccgac
ctcgaccggcagctcggacttgaagccttcgacccggcgcacctcgcgcaggtcagccgc
gacctgaccgccagcgacgccgcgctgagcactgctcgcgaacaggccgggcgactcgcc
gagcaggagcgccaactgcgcgacaagctcacccgcaaggccgacatcgaaacccaggcg
gcggaggccgggcggcagctcgatacttggcagacgctcaacaacgccctcaaggtcaac
gagttccagcagttcatgctcgccgaggtggaggcgcagctcctcacccgcgcgggcctg
ctgctcttcgacatcagcgacgggcgctaccgcctgagcctcgacaagggcgagtatgtc
gtgcaagacctctggaacgcgggcgaggtccgcgccgtcaagacgctctcgggcggcgaa
accttcctcgcctcgctctccctcgccatcgccctgagcgactacctcgcgggcaacaag
gtgctcggcgccctctttctggacgaaggcttcggcaccctcgacccgcaagcgctggaa
gccgtcgccaccgcgctcgaaaacctgcgaacccagggccgcatggtgggcatcgtcacc
cacgtcgagagcctctccgagcggttgccgagccgcctgctggtgagcaagagcatggcc
ggcagcaacgtgattcgggtggacggataa
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