Deinococcus rubellus: N0D28_01880
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Entry
N0D28_01880 CDS
T08504
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
drb
Deinococcus rubellus
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drb03009
]
N0D28_01880 (rimO)
Enzymes [BR:
drb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N0D28_01880 (rimO)
Ribosome biogenesis [BR:
drb03009
]
Prokaryotic type
ribosomal protein modification factors
N0D28_01880 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Ig_halo
Motif
Other DBs
NCBI-ProteinID:
UWX64444
UniProt:
A0ABY5YHB0
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All DBs
Position
complement(351665..353161)
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AA seq
498 aa
AA seq
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MTALLESGTELTAPSTKNKVGFISLGCPKALVDSERILTQLRAEGYQIADNYNEADTVIV
NTCGFITPAVEESLSAIGEALDATGKVIVTGCLGERPDKILARHPKVAAITGSEAVDDVM
RHVRELLPMEQHPFTDLLPTAAPGSRQLPVREDTRHGDVFAPSVKLTPRHFAYLKIAEGC
NHTCSFCIIPKLRGKQVSRDAGAVLYEAYRLIAGGTKELVVISQDTSAYGVDVRYRESEF
QETQVRAHLTDLAVKLGEMGAWVRMHYVYPYPHVEKVVELMAAGKILPYLDVPLQHASPR
ILKLMRRPGAGKQLDTIRRWREICPDLTIRSTFIVGFPGETEADFQELLTFLEEARLDRV
GAFPYSDVEEADANALANPVPEDVKQERLARFMEVAQRISAEKLGQKVGRLLPIIIDEFN
DDEDDAPGTRLIGRTKGDAPGIDGQVYLYAGEFAGQVKIGDIVEARIEESDEYDLFGEVV
ARPEWKPNVPQMGHFGGH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgactgcattgttagaatcgggcaccgaattgaccgcgcccagcaccaaaaataaagtg
ggctttatcagcctgggctgccccaaagcgctggtcgattctgagcgtatcctgacccag
ctccgggccgagggctaccagatcgccgacaattacaatgaggccgatacggtgatcgtc
aacacctgcggcttcatcacgcccgccgtggaggagagcctgtcagccatcggtgaggcg
ctggacgccaccgggaaggtcatcgtgaccggctgcctgggcgagcggcccgacaagatc
ctggcaaggcatcccaaggtggccgccatcaccggctcggaagcggtggacgacgtgatg
cggcatgtgcgtgagctgctgccgatggagcagcaccccttcacggatctgctgcccacc
gccgcgccgggttcgcgtcaactgcctgtcagggaagacacccggcacggcgacgtgttc
gcgccgagtgtgaaactcacgccgcgccacttcgcctacctcaagatcgccgaggggtgc
aaccacacctgctcgttttgcatcattcccaagctgcgcggcaagcaggttagccgagac
gccggggcggtgctctacgaggcctaccggctcatcgcgggcggcaccaaggaactggtg
gtcatctcgcaggacaccagcgcttacggggtggatgttcgctaccgcgagagcgagttt
caggaaacccaggtgcgcgcccacctgaccgatctggccgtcaagctgggcgagatgggg
gcctgggtacggatgcactacgtgtacccctatccgcatgtggagaaggtcgtggagctg
atggcggcgggcaagatcctgccgtatctggacgtgccgcttcagcacgccagcccccgg
attctcaagctgatgcgccgccccggtgcgggcaagcagctcgacaccataaggcgctgg
cgcgagatctgccctgacctcaccatccgcagcaccttcatcgtgggctttcccggcgag
actgaggccgactttcaggagttgctgacttttctggaagaggcccgcctggaccgggtg
ggtgccttcccgtattcggacgtggaggaagccgacgccaacgccctcgccaatcctgtg
ccggaggacgtgaagcaggagcgcctggcacgcttcatggaagtggcccagcgcatcagc
gccgagaagctaggccagaaggtgggccgccttctgccgatcatcatcgacgagttcaac
gacgacgaggacgacgcgcccggcacccgcttgatcgggcggaccaagggcgacgcgccg
ggcatcgacggccaggtgtatctgtatgcgggcgaattcgccggacaggtcaagatcggc
gacatcgtggaggcccgtatcgaggagagtgacgagtacgacctcttcggggaagtggtg
gcgcggcccgagtggaagccgaacgtgccgcagatggggcatttcggggggcactga
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