Deinococcus rubellus: N0D28_02375
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Entry
N0D28_02375 CDS
T08504
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
drb
Deinococcus rubellus
Pathway
drb03030
DNA replication
drb03430
Mismatch repair
drb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N0D28_02375 (dnaE)
03430 Mismatch repair
N0D28_02375 (dnaE)
03440 Homologous recombination
N0D28_02375 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drb03032
]
N0D28_02375 (dnaE)
03400 DNA repair and recombination proteins [BR:
drb03400
]
N0D28_02375 (dnaE)
Enzymes [BR:
drb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N0D28_02375 (dnaE)
DNA replication proteins [BR:
drb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N0D28_02375 (dnaE)
DNA repair and recombination proteins [BR:
drb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N0D28_02375 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UWX64532
LinkDB
All DBs
Position
455640..459653
Genome browser
AA seq
1337 aa
AA seq
DB search
MTAADATAPHIHLPDGSCCAPKRFAHLHQHTQYSLLDGAAKLKDLLKWVKEVTPDGTQAA
CAMTDHGNMHGAVHFYNYAQAAEVKPILGYEAYVVPGHGTRRDRKPGVSGEKGIFHLTLL
ARDFEGYQNLCRLSSRGYTEGYYYKPRIDHELLEEHSKGVIAFSGCLGSEVQQLLMQGRE
AEAKQRLLWYRDLFGENYYIEIQDHGLPEQKKNNPVLKAWADELGIGMVATNDGHYVKKS
DATAHETLLAIQTKAVMADENRFKFPCDEFYVKTLEEMQMALPVAEWGEQIFDNSANIAD
LCSVELPVGKKRVYQMPALPIPEGRTMAEELRVQTYAGSLKRYPHHVTEALLREYAVRSL
AALEVGERERVLARTEGCDARSCDLETLLTLVAFMGSEWEARGKVAGEKYTPYPALEVME
QAAESGPLPDYACTDWQRSKGEASDTAIQLDPGSEAEKTCRAHHTHALVLLRRAEYELSV
INNMGFPDYLLIVADYINWAKDHGISVGPGRGSGAGSIVCYAIRITNLDPLEFDLLFERF
LNPDRISMPDLDIDFNDARRVEVIDYVQKKYGEDKVAQIATFGTMASKACLKDVARVMGL
EYAKVDKVSKLIPIKFGKSFSLEQARDAVPDIQQLLAEDKQLLEAYEFAQQLEGLTRHAS
VHAAGVVIGKDKLTDLVPVMRDTSGIGMVCQYDMKAVEDIGLIKMDFLGLRTLSFLDEAK
RILRESQPVFSTQDVDFDTIPFDDEKTFEMLSRGDTKGVFQLEGAGIADASRRLKPRRLA
DIIALSALYRPGPMENIPTYVRRHHGLDTVDYVRDGFPNSAQWLEKILSETYGIPVYQEQ
IMQIASEVAGFSLGGADLLRRAMGKKDTAEMARQRQIFVEGAGGKGVPKEEANKLFDLLD
SFANYGFNKSHSAAYGVITYQTAWLKANYPVEFMAALLTVERRDSDKVAEYASDARKMGV
EVLPPDINQSGADFRVHGEQIYFGLYAIKGLGENAVVKILDERERAGRFKSLADFCSRID
HKTCNRKGSESLIKSGAFDAFGERKQLLESLEDALAWAQGAASMLNSGMDALFGMAETAP
EPRPRQNVTPLGELEKLSLEKEALGLYISGHPLEQHEGLREAATVRIAALEDWFAAQPQK
AAVGGRGPRVKAVLAGMIENVVKKPTKSGGMMARFNLADESATIELVGFSRAYERIQDKL
INDTPALVIVEIESEEGGMRVVAEEVITAEQLTDVPKVMYVDIDLEQTSPDALGEFQSVL
DEHAGSMPTFLRMEGGEQFVVYQLERPVGSSDAIRELNKTFPWSKSYLAYDQATILSRFA
PKPPAWANRQAGKGMQA
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgccgacgccactgctccgcacatccacttgcccgacggctcctgctgcgcg
cccaagcggtttgctcacctgcaccaacacacccagtactcgctgctcgacggcgcggcc
aagctcaaggacctgctgaaatgggtcaaggaagtcacgccggacggtacccaggccgcc
tgtgccatgaccgatcacggcaacatgcacggcgcggtgcatttctacaactacgcccag
gctgccgaagtcaagccgattctcggctacgaggcgtatgtggtgcccggccacggcacc
cggcgcgaccgcaagcccggcgtcagcggcgagaagggcatcttccacctgaccctgctg
gcccgtgacttcgagggctatcagaacctctgccgcctgagttctcgcggctacactgag
gggtactattacaagccgcgcatcgaccacgaacttttagaggagcattcgaagggcgtg
atcgccttctcaggctgcctcggctcggaagtgcagcaactgctgatgcagggccgcgag
gccgaggccaaacagcgcttgctgtggtaccgggacctgttcggcgagaattattacatc
gagattcaggatcacgggctgccggaacagaagaagaacaacccggttctcaaagcctgg
gccgacgaactcggcatcggtatggtggcgaccaacgacggccactatgtgaagaagtcc
gacgccactgcccacgaaacgctgctcgccattcagaccaaggcggtcatggccgacgag
aaccgcttcaagtttccctgcgacgagttttatgtcaagacactggaagaaatgcagatg
gccctgccggtggccgaatggggtgagcagatctttgacaactcggccaacatcgctgat
ttgtgcagcgtggagttgccggtaggcaagaaacgggtctatcagatgcccgccctgccg
attcctgagggccgcaccatggccgaggagttgcgcgtgcagacctacgccgggagcctc
aagcgctacccgcaccacgtcacggaggcgctgctgcgcgagtacgccgtgcggagcctg
gcggcgctggaagtgggcgagcgcgagcgggtactggcgcgcactgagggctgcgatgcc
cggagctgcgatctggaaactctgctgaccctggtcgccttcatgggcagcgagtgggaa
gcgcggggcaaggtggcgggcgagaaatacacgccttacccggcgcttgaggtgatggag
caggcggcggagtccggcccgttgcccgactacgcctgcaccgactggcagcgctccaaa
ggcgaggccagcgacacggccattcagctcgaccctggcagtgaggcggagaagacctgc
cgcgcccaccacacgcacgcgctggtgctgctgcgccgcgccgagtacgagctgagcgtc
atcaacaacatgggttttcccgactacctgctgatcgtggccgattacatcaactgggcc
aaggatcacggcatcagcgtggggccggggcgcggctcgggggcaggttcgatcgtctgt
tacgccatccgcatcaccaacctcgatccactggaattcgatctgctgttcgagcgcttc
ctcaatcccgaccgcatctcgatgccagatctggacattgatttcaatgatgcccgccgc
gtcgaagtgatcgattatgtgcagaagaagtacggcgaagataaggtggcccagattgcc
accttcgggacgatggcgagtaaggcctgtctcaaagacgtggcccgtgtgatgggactc
gaatatgccaaggtcgataaggtcagcaagctgatccccatcaagttcggcaagagcttc
tcgctggagcaggcccgcgacgctgtgccggacattcagcaattgctggccgaagacaag
caactgctggaagcctacgaatttgcccagcaactcgaaggcctgacccgtcacgcctcg
gttcacgcggcgggcgtggtcatcggcaaggacaagctgaccgatctggtgccggtgatg
cgtgacacttccggcattggcatggtctgccagtacgacatgaaagcggtggaagacatt
ggcctgatcaagatggacttcctgggcctgagaactttgtcgtttctggatgaggccaag
cggattctgcgcgaatcccagccggtcttcagcacccaggacgtcgatttcgacaccatt
cccttcgacgacgagaagaccttcgagatgctcagccggggcgacaccaagggcgtcttt
cagctcgaaggcgcgggcatcgccgacgcttcccgccgactcaagccgcgccgcctggcc
gatatcatcgcgctctcggcgctgtaccgccccggcccgatggaaaacattccgacgtat
gtgcgccgccatcacggtctggatacagtggactatgtgcgcgacggctttcccaactcg
gcgcagtggctcgaaaaaatcttgtcggaaacctacggcattccggtgtaccaggaacag
attatgcagatcgcctcggaagtcgccggattcagcctgggcggggccgatctgctgcgc
cgggcgatgggcaagaaagacacggcggaaatggcccgtcagcgccagatctttgtggaa
ggtgcgggcggcaagggcgtgcccaaggaagaggccaacaagctcttcgatttgctggac
tcgtttgcgaactacgggttcaacaagagccactcggcggcctacggcgtcatcacctac
cagaccgcctggctcaaggccaactacccggtcgagttcatggcggccctgctcaccgtc
gagcggcgcgactcggacaaggtcgccgagtacgcttccgacgcccgcaagatgggcgtg
gaagtgctgccgccggacatcaaccaatccggcgcggacttccgggttcacggcgagcag
atctatttcggcctgtacgccatcaaggggctgggcgagaacgcggtagtcaagattctg
gacgagcgggagcgggccgggcgcttcaagtcgctggccgatttctgctcacgcatcgac
cacaagacctgcaaccgtaaaggttcagagagcttgatcaagtcgggggcctttgacgcc
ttcggggagcgcaaacaactcttagagagcctagaagacgccctggcctgggcgcagggt
gcggcctcaatgctcaactcgggcatggacgccctcttcgggatggccgaaaccgccccc
gaacccaggccgcgtcagaatgtgacaccgctgggcgaactggaaaagctgagcctggag
aaagaagccctgggcctctacatttccggccaccccttagagcagcacgaggggctacgc
gaggccgccaccgtccgcatcgccgcgctggaagactggttcgccgcccagccgcagaag
gccgccgtgggcgggcgcggcccccgggtcaaggcggtgctggccggcatgatcgagaac
gtggtgaaaaagcccaccaagtccggcggcatgatggcccgtttcaacctggccgacgag
agcgccaccatcgaactggtcggcttctcgcgcgcctatgagcgcattcaggacaagctg
atcaacgacacgcccgccctggtcatcgtggagatcgagagcgaggagggcggcatgcgg
gtggtcgccgaggaagtcatcaccgccgagcaactgaccgacgtgcctaaggtcatgtac
gtggacattgatctggagcagaccagtcccgacgccctgggcgagtttcagagtgtgctg
gacgaacacgccgggagcatgcccacctttctgcggatggaaggcggcgagcagttcgtg
gtgtaccagcttgagcgtccggtgggcagcagcgacgccatccgggaactcaacaagacc
tttccctggagcaagtcgtatctggcctacgatcaggccaccattctcagccgctttgcg
cccaagccgcccgcctgggcgaaccgacaggcggggaaggggatgcaggcttga
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integrated database retrieval system
