Deinococcus rubellus: N0D28_03560
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Entry
N0D28_03560 CDS
T08504
Name
(GenBank) phage tail tape measure protein
Organism
drb
Deinococcus rubellus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
UWX64749
LinkDB
All DBs
Position
complement(658403..666934)
Genome browser
AA seq
2843 aa
AA seq
DB search
MTSLGSASLEFNVLVAPALRQLDTFTKTAKSMLTQAQNVAKIELKVDGQKALKDIDRIVK
QIKQRLDASVTLNLSSLTLLVGKVTELKNDLSKIAADMRSAGASLRGGAGGGSRNGAGAG
GGSPGAGNADAQAAAAYRQTLALNTRLAREAAAQQTAAQRQARQQQQAADQQAAAAYRQS
LALNTRLAREAAAQQAAAARQGAQASADAARAASQAARDAATQQRAADQQAAAAYRQTLA
LNARLARDAAAQQTAAARQASQAAAAAAKATADAARASAAAQTESVSKLGRELALANSKF
SQGTVRAREYLREIDRIKTAATALQPSLQAGSRDALNLSRTLQGIGGAGAKINATSITNV
RTELARARTAYEQAISAAGSSWRKQQDAAAQYQRVLGQVDTKIQQIGRRPTVTPQQTQAL
AQLQQKLASQQNALQGSASPLSFGGALSAGLKSLMPALSGLSPALGAASSQAGQLGGALG
GVAEAAGPIGGLIAGITVVLVALSAAIVASVKTATQFQAIFADIKALTQPTIAEFQKLQA
ATFDLGKPLGVGAREAAGAVLELNKAGLSAADVIGGGLKGALDLAGAAGLTAAEGGVTAT
AAMTAFGLAAKDIPSIADTFANFANKTFLGASDLTQGIAAVGPVARSSGIDMQQFAGILA
TLAQGGFKNMSDAGTSLKTMLLSLASPTDAGQKYLKKLGVSAYDASGNMKPFTSIIGDLR
EKLIKLTPQAQNQILKQIFGTDAIRAAQILLREGPKALDANTKAMGKQGEAARVAKERLD
SLAGSGKKFGAVFEELKIVIGTPFLGALKTIVDVAITVTQSLVDLVKQAQAGKGALGDMS
AGGQQAMQALYSVLAPIFKAIASLWENILKPALVALYQIFTVIVTVVTTALGIVFSVASA
VFSGVVGLIGGLLSAFTGGGNGIKISLAGVADTITRWAGVARAYIVAVGKVAGDLPVAFS
SAGQGIGRIFAGIGKIFAGFAQIAYQRLVVPILPVVAAIKSSFLSVANVIGTTLSNLLNF
VADKFRPLISFLQTIGIGIGDALASIVSSIGSNLRALTGGSADEFQKQAEAQAAAAQAQA
AKIAEGNKLVADGLSDIKSGYDQTKTAASDFGKNANTVFAQTGKDLAAANAEAARLKKTL
SAPLPKVKMPVATVPTQLASGTGTLADLGLGPKGKKSKAPPITAADLAAQDTYKKGLRDL
TDAELANAKATAIRTNNKKQLSAILAEEGRRQREVTSETKAQESASKKAAAASERDAATR
ANLVREIRQSIQSYQLLASQHKITEKSQLSFNQRIEDFRASVAKLPPELQNGVTALLDQA
SALSKSTDGQAQATKATKLSGIALSDFKEALKGSTAARLKQLEAESRASKNDVVHAAVVA
EQTRREGALTAQRKKATSEQEAQSKRDARTLAAQQKAADSLGRGLTNLIADFRLQTQQGK
TTAESLQNFQQRLEGASEQAKRLPPALRENITTLLNQGSALAKTGQGVVDYRGQIETLKG
EVDKYTLSELEAARAKALAAGNQSAIVKLLDKEIASRKTLSATQLDQADSESRLAQVSAS
SDNVEGEYQNRQALAKGNLATLYQLELQYGQRVQDARDARAREESANEDRQINDKYDKLG
KLEGITDAQQRRLDADRTAELSANAQKLTNTLAANSTSRAASELSAKTALDAALLTVDRQ
TRDTIRKNNLTLLSAQTGDLEAQQQEALDVEGLTQQQTLEIRRRFQPLLIAQKQREVETS
RTIEQQAETDRYNDAVDAATLNGTLNQKRLQQDGSYLTVSEALSKEHISNVALIEKNGAD
AVRDYALSVKRATGKQLVADDKATSDELVAVAKSRIDDQLQGLSEMDGKQRDVARAALGF
WRQVYAAMGEAGKASLAEVDDAIKKLGQAGDVARSKASAVLAELPTPTAGSFARDLNAVG
KTEDAGDARDSAEKQYDSLLKTYQGYLDKARVAFQQFADARDEDLTPADRQIRDGLLGTM
RLYDDLISQITVAAAEAGDKAASAFTLAQNDKLAEGNLSLIEAQHALADQEGRDDGPAYR
AGLGAALAYWKARKTGLTEGTPEYLAALQKVTELETKLDAASAQVRADKDQESALALVEA
RYALEQALGQDGGPSYLAGLKASLAYWQGRLTELKEGTPEYLAALQKVADLEGKVRSQPD
KAAEGRLSYVEAQYALAQMEGRDGGPAYTAGLNAALAYWRGRLKELNEGTPEYIAALQKI
TDLEGKVRSQPDKNAEGAFALAEAQYALAQVEGRDGGPAYLAGLNASLAYWRGRLKELNE
GTPEYIAALQKIADLEGKVKSVPDANAEGALALVEAEHALAELQKRDDGPAYQAGLNAAL
SYWRARLANLTRGTPEYLAALQKVTDLEGKLHDSGAQVLADKDQENALALIEARHALAEQ
EGKNDGPEYRIGLRASLNYWKGRLTGLKEGTPEYLAALQKITDLAGKIKAADPGQKLAES
FATGAAAIGTGGKLQSALSAGLSGLGAFFSAGGVAGKGGAILGGAAALVGGLKDVFVTGN
EDIDNVTAALVDGVQGTLGALAKGDWVGAIIAAVATVVNTVLNIIQGAKRSLSKAKSEIQ
ASTQDVKFFDLGKYAVVQTYKGGFLGLQTLSRSVIDQQAIDIAKSLGDAIYEGISTGLLN
GIKAGKASFGDLGIDLKKTLGNQILQGLIDGFLRGAAMTAILQPFLDAYVTAMKAGDANG
MAAAAEGIQNAAAAANTQLQAFYQNVLVPTSKRLGLFGSEADTNSKDPALSSGLSGPSEV
SFGGGDQSSNVTTEGSSLSAGQITVFTDALTAGAGQIVGAAQQQQAASTEFGGHVGRFGQ
FVTQFGQYVSRGPSTNWAGYNPQ
NT seq
8532 nt
NT seq
+upstream
nt +downstream
nt
atgacctctctaggctccgcttccctcgagttcaacgtcctcgtcgctccggccctgcgc
cagctcgatacctttaccaagactgccaagtcgatgctgacccaggcccagaacgtcgcg
aagatcgaactgaaggtggacggccagaaggccctgaaggatatcgaccggatcgtcaag
cagatcaaacagcgcctcgacgcctcggtgaccctgaacctgtcgagcctgaccctgctg
gtgggcaaggtcaccgaactgaagaatgacctgagcaagatcgccgccgacatgcggagt
gcgggggccagcctgcggggtggggccggtggcggctcgcggaacggggccggtgccggt
ggcgggagtcctggagctgggaacgccgacgcgcaggccgccgccgcttaccgtcagacc
ctcgccctgaacacccggctggcccgcgaggccgctgcccagcagactgcggcccagcgc
caggcccgccagcagcaacaggccgccgatcagcaggccgctgccgcctaccgccagtcc
ctggccctcaacacccgtctggcgcgcgaggctgctgctcagcaggctgctgcggcccgg
caaggtgcccaggccagcgctgatgctgcccgcgccgcctcccaggctgcccgtgatgcg
gcgacccagcagcgcgccgccgatcagcaagccgctgcggcttaccgtcagaccctggcc
ctgaatgcccggctggcccgcgacgcggcggcacaacagaccgctgcggcccgccaggcc
tcacaggctgctgctgcggctgccaaggccactgccgatgcggcccgcgcctcagcggcc
gcccagacggaaagtgtcagcaaattggggcgcgagctggctctcgccaacagcaagttc
agtcagggaacggtcagggcacgcgagtatctgcgcgagatcgaccgcatcaagacggcg
gccacagccctgcagcccagcctccaggccggaagccgcgacgcgctgaacctcagccgc
acgctgcaaggcatcggtggggccggggcgaagatcaacgccaccagtatcaccaacgtc
cgcaccgaactggcccgcgcccgcactgcttacgagcaggccatcagcgccgccgggtcg
agctggcgtaaacagcaagacgctgctgctcagtaccagcgcgtcctgggccaggtggac
accaagatccagcagatcgggcgcaggcccacggtcaccccgcagcagacccaggctctc
gcgcagctccagcagaagctcgccagtcagcagaacgccctacaaggctcagcttcaccg
ctgagcttcggtggagcactgtcggctggcctgaaatccctgatgcccgcgttgagtggc
ctcagcccagccctcggcgcggcctcctcgcaggccggtcagctcggtggcgcgctgggc
ggggtggccgaagcggctggtcccatcggcggcctcatcgccgggatcaccgtggttctg
gtggccctgtcggcggccattgtggcgagcgtcaagaccgccacccagttccaggcgatc
ttcgccgatatcaaggcgctgacccagccgaccatcgctgagtttcagaagctccaggct
gcgacgtttgacctcgggaaaccgctgggcgtcggagcacgtgaagctgccggggccgtt
ctcgaactcaacaaagcgggcctgagtgctgctgatgtgatcgggggcgggctgaaaggc
gcgctcgacctggccggtgccgctggtctgaccgctgcggagggcggggtcaccgccacc
gcagccatgaccgccttcgggctggccgccaaagacattccgtcgatcgccgacaccttc
gccaacttcgccaacaagaccttcctgggcgcttcggacctgacccagggcatcgccgcc
gtggggccggtcgctcggtcttcgggcatcgacatgcagcagttcgcaggcatcctggcc
accctggcgcagggcggattcaagaacatgtccgacgcgggcacgtcgctcaagacgatg
ctgctctcgctggcctcacccaccgatgcgggccagaaatacctcaagaagctcggcgtc
tcggcttacgacgccagcggcaacatgaagccgtttaccagcatcattggcgacctgcgc
gagaagctgatcaagctcacgccccaggcccagaaccagatcctcaagcagatcttcggg
accgacgccatccgcgccgcccagatcctgctgcgcgaagggccaaaagccctcgacgcc
aacaccaaggcgatgggcaaacagggtgaagccgcccgcgtcgccaaggaacgcctcgat
tcgctggccggaagcggcaagaaattcggcgcagtcttcgaggaactgaagatcgtcatc
ggcacgccgttcctgggcgcactgaagacgattgtggacgtggcgatcacggtcacccag
agcctggtcgatctggtcaagcaggcccaggccgggaagggcgcgctcggggacatgtcg
gcaggcggccagcaagccatgcaggcgctctacagcgtgctggccccgatcttcaaggcc
atcgcctcactgtgggagaacattctcaagcccgcgctggtggcgctgtaccagatcttc
accgtcatcgtcacggtagtgaccaccgcgctgggaatcgtgttcagcgtggccagtgct
gtgttcagcggcgtggtcggtctgatcggagggctgctgtcggccttcaccggcggcggc
aacggcatcaagatcagcctcgccggggtggctgacaccatcacgcgctgggctggagtc
gcgcgggcctacatcgtcgcggtgggcaaggtggccggtgacctgccggtggccttcagc
agcgccggtcagggcatcgggcggatcttcgcaggtatcggcaagatcttcgcaggcttc
gcgcagatcgcctaccagcgtctggtggtaccgatcctaccggtggtcgcggccatcaag
agttctttcctgagcgtggccaacgtcatcggaacgaccctgagcaacctgctcaacttc
gtggctgacaagtttcgccccctgatcagcttccttcagaccatcgggatcgggatcggg
gacgcgctggccagcatcgtgtcgagcatcggcagcaacctgcgcgccctgactggcggc
agcgccgacgagttccagaagcaagccgaagctcaggccgcagcggcacaggcccaggcc
gccaagatcgccgagggcaacaaactggtcgccgatggcctgagcgatatcaaatcaggc
tacgaccagaccaaaacggcggcttccgacttcgggaaaaatgccaacaccgtctttgct
cagaccggaaaggatctggcagccgcgaatgcagaagcggccaggctcaagaagaccctc
tctgcgccactacccaaggtcaagatgccagtggccacggtgccgacccagctcgccagc
ggtaccggaacgctggccgatctggggctggggccgaagggcaagaagtccaaggccccg
ccgatcaccgccgccgacctggccgcccaggacacctacaagaagggcctgcgcgacctc
accgacgccgaactcgccaacgcgaaagcaacggccattcgaaccaacaacaagaagcag
ctcagcgcgatcctggccgaggagggccgccgtcagcgtgaagtgacctccgaaaccaag
gcccaggaatcggcctcgaagaaagcagctgctgcttcggagcgggacgcggccacccgc
gccaacctggtgcgcgagatccgccagagtatccagtcctaccagctgctggccagccag
cacaagatcaccgagaagtcccagctcagcttcaaccagcggattgaggacttccgcgcc
agcgtggccaagctgccgcctgaacttcagaacggcgtcactgcgctgctcgaccaggcg
tccgccctctcgaagagcaccgacggtcaggcccaggcgacgaaggccaccaagctcagc
gggatcgcgctctcagacttcaaagaggcgctgaaaggttccaccgccgcccgcctgaag
cagctggaggccgagtcgcgggccagcaagaacgacgtggttcacgcggctgtggtggcc
gagcagacccgccgcgagggtgcgctcactgcacagcgcaaaaaagcaacctcggagcag
gaagcccagagcaagcgcgacgcaaggaccctcgcagcccagcagaaggccgccgacagc
ctggggcgcggccttaccaacctgatcgctgatttccgcctccagacccagcaggggaag
acgacggcagagagcctccagaatttccagcagcggctggaaggtgcgagcgaacaggcc
aagcgcctgccgcccgctctacgcgagaacatcaccaccctgctcaatcagggatctgcg
ctggccaaaaccgggcaaggggtcgtcgattaccggggacagatcgagaccctcaaggga
gaagtcgacaagtacaccctgtccgagctggaagcggcccgcgccaaggccctggcagca
ggcaaccagagcgccattgtcaagctgctggacaaggagattgccagccgcaaaaccctc
tcggcgacccagctcgaccaggccgattccgagagccgactcgcacaggtatcggccagc
agcgacaacgtcgaaggcgaataccagaaccgccaggcgcttgcgaagggcaatctggcg
accctctaccagctggagctgcaatacggccagcgggtccaggacgcccgcgacgcccgc
gcccgcgaggaaagtgccaacgaagaccgccagatcaacgacaaatacgacaagctcggc
aagctcgagggcattactgacgcccagcagcgccgccttgacgccgaccgcaccgctgaa
ctcagcgccaatgcccagaagctgaccaataccctggcggcgaactcgaccagccgcgcg
gccagcgaactcagcgccaagaccgcgctcgacgcggccctgctgacggtggatcgtcag
acccgcgacaccatccggaagaacaacctcaccctgctctcggcccagactggcgatctg
gaggcccagcagcaggaagccctcgacgtcgagggcttgacccagcagcaaaccctggag
atccgccgccgcttccagccgctgctgatcgcccagaagcaaagagaggtcgagaccagc
cgcaccatcgagcagcaggccgaaacagaccgctacaacgatgcggtggacgcggccacg
ctcaacggcaccctgaaccagaagcgcctccagcaggacggctcttacctcacggtgtcc
gaggcgctcagcaaagagcacatctcgaacgtcgcgctgatcgagaagaacggcgcggac
gcggtgcgggactacgccctgagcgtcaaacgtgcgactggcaagcagctggtggccgac
gacaaggccacgtccgacgagctggtggcggtggcgaaaagccgcattgacgatcagctt
cagggcctgtcggaaatggacggcaagcagcgcgatgtggccagggcggccctgggcttc
tggcggcaggtctacgccgcgatgggcgaagcaggcaaggccagtctggccgaggtcgac
gacgccatcaaaaagctggggcaagctggcgacgtcgctcgcagcaaggccagcgccgtc
ctggccgagttgcccacccccacagcaggcagctttgcccgtgatctgaatgccgtgggc
aagacggaagatgccggagacgcccgtgacagcgctgagaagcagtacgacagcttgctg
aagacctaccaaggctatctcgacaaggcgcgggtggccttccagcagtttgccgacgcc
cgcgacgaggatctcaccccagcagaccgccagattcgtgacgggttgctgggcaccatg
cggctttacgacgatctgatcagtcagatcactgtggccgccgctgaggccggagacaag
gcggcctcagccttcaccctggcgcagaacgacaagctcgccgaagggaacctctcgctg
atcgaagcccagcacgccctggccgatcaggaagggcgcgacgacggccccgcctaccgc
gctggattgggggcggcgctggcctactggaaggcccgcaaaacggggctgaccgagggg
acaccggaatacctggctgccctgcaaaaggtcaccgaactggaaaccaagctcgatgcc
gcgagcgcccaggtgcgggccgacaaggaccaggagagtgctctggccctggtggaggcc
cgctacgccctggagcaggcgctgggtcaggacggcggtcccagttacctggccgggctg
aaagcctccctggcctactggcagggccgcctgactgaactcaaggagggaacgccggaa
tacctggcggccctgcaaaaagtcgccgatctcgaagggaaggtccgaagtcagccggac
aaggcggctgaaggtcggctgtcgtatgtcgaggcccagtacgccttggcccagatggaa
ggccgcgacggcgggccagcctacacagcggggctgaatgctgccctggcttactggcgc
ggtcgtctgaaggagctgaacgagggaacgcccgagtacatcgcggcgctgcagaagatc
accgacctggagggcaaggtccgcagtcaaccggacaagaacgcagaaggggcgtttgcg
ctggctgaagcccagtacgccctcgcgcaggtggaggggcgcgacggcggacccgcttac
ctggcgggtctgaatgcctcactggcctactggcggggccgtctcaaggaactgaacgaa
gggacacccgagtacatcgcagcgctgcaaaaaatcgccgacctggaaggcaaggtcaaa
tcggtgccggacgccaacgccgaaggtgcgctggccctggtggaagccgaacacgccctg
gctgagctgcagaagcgcgacgacggccccgcttaccaggcagggctgaacgcggccctg
agctactggcgcgccagactcgccaacttgaccaggggtacacctgaatacctggcggcg
ctgcaaaaagtaaccgatctggaaggcaagcttcatgacagcggtgcccaggtccttgct
gacaaagatcaggaaaatgccctggcgctgatcgaggcccggcacgcgctggccgagcag
gaaggcaagaacgatggaccagagtaccgcatcggactgcgggcctcgctgaattactgg
aaggggcgcttaaccggcctcaaggagggaacgcctgaatacctggcggccctgcaaaag
atcaccgacctggcaggaaaaatcaaggccgctgaccctggccagaagctggctgagtcg
ttcgccaccggggctgcggccattggcacgggcggcaagcttcagagtgccctctcggca
ggcctgagcggactgggggccttcttctcggcaggcggcgtggcaggtaagggcggggcc
atcctgggcggcgcggcagccctggtgggtggcttgaaagacgtcttcgtcaccgggaac
gaggacatcgacaacgtgactgcggccttagtggacggggtgcagggaacccttggagcc
ctggccaagggcgactgggtgggggccatcatcgcggcggtcgccactgtcgtgaacacg
gtcctgaatatcattcagggcgcaaaacgttcgctgtccaaggcgaaatctgagatccag
gcttcgacccaggacgtcaaattctttgacctcggcaagtacgccgtggtgcagacgtac
aagggcggcttcctgggcctgcaaacgctgagtcgcagcgtgatcgaccagcaggcgatc
gacatcgccaagagcctcggggacgccatctacgagggcatcagcaccgggctgctcaac
ggtatcaaggccgggaaggccagcttcggtgacctgggcatcgatctgaagaagaccctc
gggaaccagatcctgcaagggctcattgacggcttcctgcggggcgcggccatgacggcc
atcctgcaacccttcctcgacgcctacgtcaccgcgatgaaagctggagacgccaacggc
atggcggccgccgccgaaggcatccagaacgcggcggcggccgccaacacgcaactccag
gccttctatcagaacgtgctggtgccgaccagcaagcgcctcgggctgttcggcagcgaa
gcggacaccaactccaaagaccctgccctctccagcggcctctccggaccttctgaggtc
agctttggcggcggggaccagagcagcaacgtcaccaccgagggcagcagcctcagcgcc
gggcagatcacggtgttcaccgacgccctgacggccggagccggacagatcgtcggcgcg
gcgcagcagcagcaggccgccagcacggagttcggtgggcacgtcggccgcttcggccag
ttcgtgacgcaattcggtcagtacgtctcacgcggccccagcaccaactgggccggttac
aacccgcagtaa
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integrated database retrieval system
