Deinococcus rubellus: N0D28_06225
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Entry
N0D28_06225 CDS
T08504
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
drb
Deinococcus rubellus
Pathway
drb03410
Base excision repair
drb03430
Mismatch repair
drb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N0D28_06225
03430 Mismatch repair
N0D28_06225
03440 Homologous recombination
N0D28_06225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drb03400
]
N0D28_06225
DNA repair and recombination proteins [BR:
drb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N0D28_06225
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N0D28_06225
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N0D28_06225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_C_Deinoc
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UWX65594
UniProt:
A0ABY5YKG6
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All DBs
Position
1187946..1189991
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AA seq
681 aa
AA seq
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MAEFGVSPMLAQVLSARGLRRAHLTPELALTPNPGLLEAAERTVRAIKAGKRIRIHGDYD
ADGVSATAILVWGLREVGANVHGFIPHRLNEGYGVHPDRVAEHAEAADLLITVDCGVTNL
EEIRSLLAGGVEVIVTDHHSPGPDFPDCLVVHPKLTRDYDPAIHNLTGAGVAYHLLWAVY
QHLGLPAPIHLTPLATLGTVADVAPLVGENRALVVAGLLEFGRTELPGVRALMNGLKKVT
ARDVGFVLAPRINAAGRMGEADVALELLTTTHKLEAEKLSTYLEIKNSERRVLQDRMFKE
ALQLVDPADPALVITKDDWHPGVMGIVASKLLETYYRPVYIVAQGKGSVRSTPGISAVAG
LYDSAHLLKRFGGHPGAAGFSLDMDQFAAFRDRIHNYARQFPRPLPTVALDALLPAGCAD
FDLIGEIERFEPFGEGHRAPLWHLRGPLEAAKLIGQDRGTLSFTALGVRGIKYREGRTRS
GPHDFALHLQRNAWNGREKAEFLGEALRVPEALSLAGEPGGGPVLARLDPKTAMQHLRDG
ALAYAVGEVAGYLQSHIPGVTLLDGDANLSGEVVLYALPPEDALARWLGQGRVSFAWGPK
TLAELDGQTLGRRAVLSGLDYAREGERLQAAETYRRLQWAHFYRTLDDEGFMRAVRAMLG
LDQQDTSAGQCLEKEKMWAAD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggccgagttcggggtgtcaccgatgctggcgcaggtgctctcggccagggggctgcgc
cgcgcccacctgacgccggagctggcgctgacgcccaatcccggcttgctggaagccgcc
gagcgcactgtgcgggccatcaaagccggaaagcggatccgcattcacggtgactacgac
gccgacggtgtgagcgccactgccattctggtgtgggggctgcgcgaggtgggcgcgaac
gttcacgggttcattccgcaccggctcaacgagggctacggcgtgcatccggaccgggtg
gccgagcacgccgaggccgccgacctgctgatcacggtggactgcggcgtgaccaatctg
gaggagatcaggagtctgctggccggtggcgtggaggtcatcgtcaccgaccaccactca
ccgggaccggactttcccgactgcctggtggtgcatcccaagctgacgcgcgactacgac
ccggccatccataacctgaccggcgcgggtgtggcctaccacttgctgtgggcggtgtat
cagcatctcggcttgcctgcaccgattcacctgacgccgctggcgaccctcggcacggtg
gccgatgtggccccgctggtgggcgagaaccgggcgctggtggtggccggtctcttggag
ttcgggcggactgagctgcccggtgtgcgggcgctgatgaacggcctcaaaaaagtgacg
gcccgcgacgtgggcttcgtgctggccccgcgcatcaacgcggcgggccggatgggtgag
gccgatgtggccttagagctgctgaccaccacccacaagctggaggctgagaagctcagc
acttacctggagatcaagaacagtgagcggcgggtgctgcaagaccggatgttcaaggaa
gcgctgcaactggtcgaccccgccgacccggccctggtcatcaccaaagacgactggcac
cccggcgtgatggggatcgttgccagcaagctgctcgaaacgtactacaggccggtgtat
atcgtggcgcagggcaagggatcggtgcgcagcacgcccggcatctcggcggtggcgggc
ctctacgactcggcacatctgctcaagcgcttcggcgggcatcccggtgcggcgggcttc
tcgcttgacatggaccagtttgccgctttccgggaccgcatccacaactatgcccggcag
tttccgcgcccgttgccgacggtggcgctcgacgcgctgctacccgccgggtgcgcggac
ttcgatttgatcggcgagattgagcgcttcgagccgttcggggaaggccaccgtgcgccc
ctgtggcacctgcgcggcccactagaagccgccaagctgatcggccaggacaggggcacc
ctcagcttcacggctcttggggtgcgcgggatcaagtaccgcgagggccgcacccgttcg
gggccgcacgacttcgccctgcatttgcagcgcaatgcctggaacgggcgcgagaaggcc
gagtttctgggcgaggcgctgcgcgttccggaggcgctcagcctcgccggagaaccgggc
ggcggccccgtgctggcacgtctcgatcccaaaacggccatgcagcatcttcgggacggc
gcgctggcctacgcggtgggcgaggtggccgggtaccttcagagccacattcccggtgtg
acgctgctggacggcgacgccaatctcagcggtgaggtggtgctctacgccctgccgccc
gaggacgccctggcccgctggcttggtcagggccgggtatcgttcgcctggggacccaag
accctggccgagctggacgggcagacgctgggccgccgcgccgtgctgagcgggctggac
tacgcgcgggaaggcgagcgcctccaggccgccgagacttaccgccgcctccagtgggcg
cacttttaccgcacactcgatgacgagggattcatgcgggcggtgcgggccatgctgggg
ctggaccagcaagacacgtcagcggggcagtgccttgaaaaagagaagatgtgggccgcc
gattga
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