Deinococcus rubellus: N0D28_07535
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Entry
N0D28_07535 CDS
T08504
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
drb
Deinococcus rubellus
Pathway
drb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N0D28_07535 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drb03400
]
N0D28_07535 (uvrA)
DNA repair and recombination proteins [BR:
drb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N0D28_07535 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N0D28_07535 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
nSTAND1
AAA_23
AAA_22
RsgA_GTPase
nSTAND3
AAA_25
BCA_ABC_TP_C
HUTI_composite_bact
AAA_33
ATPase_2
DnaJ_CXXCXGXG
NACHT
nSTAND_NTPase5
nSTAND6
cobW
AAA_18
NTPase_1
Viral_helicase1
T2SSE
RNA12
ATPase
Motif
Other DBs
NCBI-ProteinID:
UWX65492
UniProt:
A0ABY5YK51
LinkDB
All DBs
Position
complement(1440680..1443862)
Genome browser
AA seq
1060 aa
AA seq
DB search
MQNLIVRGAREHNLKNVTVELPRDKFIVITGVSGSGKSTLAFDTIYAEGQRRYVESLSAY
ARQFLGLMEKPDVESIEGLSPAISIDQKTTSHNPRSTVGTVTEIHDYLRLLYARTGTPYC
PVCGRKIERQSPTEITDKLLAGFTDQRAILLAPLVRGRKGEYRKLFADIRREGYARVRVD
GVLYELDEAEKLKLEKFEKHDVDVVIDRLTVRESDRSRLAESVELGLRRGEGLLRVLFPD
SGAEELYSEKFACPEHGSVLEELEPRSFSFNNPYGACPDCAGLGSKREFSPDLIIDDALS
IAEGAILPWSKKGTGGGVYYWDKLKALSEHLSFDLKTPWRDLSKAAQKSILQGPGEAFEV
VYRRGGKETMRFMTEFEGVLVNLERRYAETESEFMREKLEEMMELRPCPTCGGTRYKPEI
LAVRVGGLNIAQASGMSVLDADQFFRELQDGEVNHEVIKSYLGQHDGGEARIARPRHYEY
GLSEFGAAVAAPILRAVRTRLTFLVDVGLDYLSLDRTANTLSGGEAQRIRLATQVGSGLT
GVLYVLDEPSIGLHPKDNGRLIETLKRLRDLGNTLLVVEHDEDTMMSSDYVVDMGPGAGV
HGGEVVAVGTPAEIKANPDSLTGKYLRGELRIEVPTKRRRGNGKRLKVIGAREHNLQNVT
LEVPLGTMTVVTGPSGSGKSTLIHDILHATLARDLNGAKTTPGKADAITGIEYLDKVIEI
DQSPIGRTPRSNPATYTGVFTEVRDLFTRTPEARRRGYLAGRFSFNVKGGRCEHCKGDGV
MKIEMNFLPDIYVPCEVCKGARYNRETLEVKYNGKTIADVLDMTVEDAHAFFEPIPTIER
KMQLLCDVGLGYMKIGQPSTTLSGGEAQRIKLASELSKRATGKTIYILDEPTTGLHFEDV
RKLMEVLERLVEGGNTLIIIEHNLDVMKCADWIVDLGPEGGVRGGTIVATGTPEQLAAHP
TSYTGEFLKRVPGIVPSSKPLVSVKPDPLTEAERPGVDPDGLTDAGELEATGAVKKAKPK
AASKKVPSKRGKKQIEALDDLLDDEDAELMAVDAPHKKTA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacctgattgtgcgcggtgccagagaacacaacctcaagaacgtgacggtggaa
ttgccccgtgacaagttcatcgtcatcaccggggtgtcgggcagcggcaagagcacgctg
gccttcgacaccatctacgctgagggccagcgaagatatgtcgagtcgctctcggcctac
gcccggcagtttctgggcctgatggaaaagcccgatgtggagagcatcgaggggctgtca
ccggccatctcgatcgaccagaagaccacctcgcacaacccgcgcagcacggtgggcacc
gtcaccgagattcacgattacctgcgcctgctgtacgcccgcaccggcacgccctactgc
cccgtctgcgggcgcaagatcgagcgccagagccccaccgagatcaccgacaagttgctg
gcgggcttcaccgatcagcgggccattctgctcgcgccgctggtgcgtgggcgcaagggc
gagtaccgcaagctgtttgccgacatccgccgcgaagggtatgcccgtgtgcgggtggac
ggcgtgctgtacgaactcgacgaggccgagaaactgaagctggagaagttcgagaagcat
gatgtggacgtggtcatcgaccgcctgacagtgcgcgagtcggaccgctcccgcctggcc
gagagcgtggaactgggactgcggcgcggtgaaggcctgctgcgcgtcctgtttcctgat
tccggtgccgaagaactctactccgagaaattcgcctgccccgaacacggcagcgtgctg
gaggaactggaacccaggtcgttcagcttcaataacccctacggcgcgtgccccgactgt
gcgggcctgggcagcaagcgcgagttctcgccggacctgattatcgacgacgcgctgagc
atcgctgagggcgcgattttgccctggagtaagaaaggtactggcggcggcgtctactac
tgggacaagctcaaggccctgtccgagcacttgagtttcgacctcaagacaccctggcgt
gatttgagcaaggcggcgcagaagtccatcctgcaaggccccggcgaagccttcgaggtg
gtctaccggcgcggcggcaaggaaaccatgcgcttcatgaccgaattcgagggcgtgctg
gtcaacttggagcgccgctacgccgagaccgaatcggaatttatgcgcgagaaactcgaa
gagatgatggagctgcggccctgcccgacctgcggcggcacccgctacaagcccgagatt
ctagcagtgcgggtcggcggcctcaacatcgcccaggccagcggcatgagcgtgctcgac
gccgatcagttcttcagggaactccaggacggcgaggtcaaccatgaggtcatcaagtcc
tacctcggccagcacgacggcggagaagccagaatcgcccggccccggcactacgagtac
ggcctgagcgagttcggcgcggcggtggcggccccgattctgcgggccgtccgcacccgg
ctgacctttctggtggacgtgggtctcgattacctgagcttggatagaaccgccaacacc
ttatcgggcggcgaggcgcagcgcatccggctggcgacccaggtgggttcgggcctgacc
ggcgtgctgtacgtgctcgacgaacccagcatcgggctgcaccccaaggacaacgggcgg
ctgatcgaaaccctcaagcgattgcgcgacctcggcaataccctgctggtcgtcgaacac
gacgaggacaccatgatgtcttcggactacgtggtggatatggggccaggcgcgggcgtc
cacggcggcgaggtggtggccgtcggcacccccgccgagatcaaggccaaccccgacagc
ctgaccggcaagtacctgcgcggcgaactcaggatcgaggtgcccaccaagcggcggcgc
ggcaacggcaagcgcctcaaagtcattggcgcgcgcgagcacaacctccagaacgtcacc
ctggaggtgccgctcggcaccatgacggtggtgacggggccgagcggatcaggcaaaagc
accctgattcacgacatcctgcatgccaccctggcccgcgacctcaacggagccaagacc
acacccggcaaggccgacgccatcaccggcatcgaatatctggacaaggtcatcgagatc
gaccagtcgccgattggccgcacgccgcgcagcaacccggccacctacactggcgtgttt
accgaggtgcgcgatctgtttacccgcaccccggaagcgcggcggcgcggctatctggcc
ggacgcttttcctttaacgtcaagggcggacgctgcgagcactgcaagggcgacggcgtg
atgaagatcgagatgaacttcctgccggacatctacgtgccctgcgaggtctgcaaaggc
gcgcgctacaaccgcgaaacgctggaagtcaagtacaacggcaagaccattgcggacgtg
ctggacatgacggtagaggacgcccacgccttctttgagccgattccgaccatcgagcgc
aagatgcagctgctgtgcgacgtcggactgggctacatgaagatcggtcagccctccacc
accttatcgggcggcgaggcgcagcgcatcaagctggcgtccgaactcagcaagcgcgcc
accggcaagaccatctacattctcgacgagccgacgaccggcctgcacttcgaggacgtc
cgcaagctgatggaagtgctggaacggctggtcgagggcggcaacaccctcatcatcatc
gagcataatctggacgtgatgaagtgcgccgactggatcgtggacctcggcccggagggc
ggcgtgcgaggcggcaccatcgtcgccaccggcacgcccgagcaactggccgcccacccg
acgagctacactggcgagttcctcaaacgggtaccgggcatcgtgccgagcagcaagccg
ctggtcagcgtcaagcctgacccgctgaccgaagccgagcgccctggggtggacccagac
ggcctgaccgacgcgggcgaactggaggccaccggagccgtgaagaaagccaaacccaag
gccgcatccaagaaagtaccgtccaaacgcggcaagaagcagatcgaggcgctggatgat
ctcctcgacgatgaggacgccgagctgatggccgtagacgcgccgcacaagaagaccgcg
tga
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