Deinococcus rubellus: N0D28_07580
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Entry
N0D28_07580 CDS
T08504
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
drb
Deinococcus rubellus
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drb03032
]
N0D28_07580
03400 DNA repair and recombination proteins [BR:
drb03400
]
N0D28_07580
Enzymes [BR:
drb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
N0D28_07580
DNA replication proteins [BR:
drb03032
]
Prokaryotic type
DNA Topoisomerases
N0D28_07580
DNA repair and recombination proteins [BR:
drb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N0D28_07580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UWX65500
UniProt:
A0ABY5YKY6
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All DBs
Position
1452104..1454110
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AA seq
668 aa
AA seq
DB search
MTSSDLPDIGTTPEVQEYDASQISVLKGLEAVRKRPGMYVQGGTGVDGYHQLMTEIIDNA
IDEGLAGFADEVHIIMHEDGAATVTDNGRGIPVDIMKSEGRSAIEVIFTELHAGGKFGQG
AYKVSGGLHGVGSSVVNALSTYLDVTVNKHGQLYHIRFERGDVIIPLEVLGDTPKDVRWA
TKVSFLPDAEVFSEFDNSFNYDRIRGRLRELAYLTGLKIVLRDERIALHGDEIKEETFHE
KGGIANFARALVIDDSKLLYDQPIVMRGTHSGVEVEVAFIHANTYSSDNILTYANMIRTR
DGGTPLTGFKTAYTRILNKYARDKNMIKSGNPIPGGDDLLEGIYCVVSVKLGEPQFESQA
KVKLLNSEAQTAVNAVVGDKFAEFLEENPKIGKTIVEKAAEAARAREAARKARDIIRRSN
PLENDDLPGKLADCSSQDPAESELFIVEGNSAGGSAKGGRERRFQAILPLRGKILNVEKA
ELNRILKNAEIRSLIGAIGAGVEGTGDNVHFDLSNLRYHKIIIMTDADMDGGHITTLLLT
FFFRYMRPIVEQGHLYIAQPPLYRIMVGRQTSANKGTYLYAEDQLKKHVAQASREGKKYE
IQRFKGLGEMNADQLWDTTMNPEGRVLKRVSIEDLLIANEVFEALMGTDVGPRKEFIREN
ARFAEISI
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatctgatttacccgatatcggcaccaccccggaagtccaggaatacgacgcc
agccagatcagcgtcctgaaaggtctggaggctgttcgcaagcgccccggcatgtacgtg
cagggcggcaccggcgtggacggctaccaccaactcatgaccgaaatcatcgacaacgcc
atcgacgagggcctggcgggcttcgccgacgaggtgcatatcatcatgcacgaggacggc
gcggccaccgtcaccgacaacgggcgcggcatcccggtggacatcatgaagtccgagggc
cgcagcgccatcgaggtcatctttaccgagctgcacgcgggcggcaagttcggccagggt
gcctacaaggtgtccggcgggcttcacggcgtcggcagcagcgtggtcaacgcgctgagc
acctacctcgatgtgaccgtcaacaagcacggccagctttaccacatccgcttcgagcgc
ggcgacgtcattatcccgttggaggtgctgggcgacacccccaaggatgttcgctgggcg
accaaggtcagcttcctgccggacgccgaggtgttcagcgagttcgacaacagcttcaac
tacgaccgcatccggggtcgcctgcgggaactggcttacctgaccggcctcaagatcgtg
ctgcgtgacgagcgcatcgcgctgcacggcgatgagatcaaggaagaaaccttccatgaa
aaaggcggcatcgccaacttcgcccgcgccttggtcatcgacgactccaagctgctctac
gaccagcccatcgtcatgcgcggcacccacagcggcgtggaggtggaggtggcgttcatc
cacgccaacacctactcctccgacaacatcctgacctacgccaacatgatccggacccgc
gacggcggcaccccgctcaccggcttcaagacggcgtacacccgcattctcaacaagtac
gcccgcgacaagaacatgatcaaatccgggaaccccattcccggcggcgacgacctgctg
gaaggcatctactgtgtggtgtcggtcaagctgggcgagccgcagttcgagtcgcaggcc
aaggtcaagctgctcaacagtgaagcgcagaccgctgtgaacgccgtggtgggcgacaag
ttcgccgaattcctggaggagaatcccaagatcggcaagaccatcgtggagaaggccgct
gaggctgcccgtgcccgcgaggccgcccgcaaggcccgcgacatcattcgccgcagcaac
ccgctggaaaacgatgacttgcccggcaagctggccgactgttcctcgcaggacccggcg
gagagcgaactgttcattgtggaaggcaactcggcgggcggctcggccaagggcggacgc
gagcggcgcttccaggcgattttgcctctgcgcggcaagatcctgaatgtggagaaggct
gaactcaacaggattctcaagaacgccgagattcgctcgttaatcggcgcgattggggcg
ggcgtggaaggcacgggcgacaacgtacacttcgacctctctaacctgcgttaccacaag
atcatcatcatgaccgacgccgacatggacggcgggcacatcaccacgctgctgctgacc
tttttcttccgctacatgcgtccgattgtcgagcagggccacctctatatcgcccagccg
ccgctctaccgcatcatggtgggccgccagaccagcgccaacaagggcacctacctctac
gccgaagaccagctcaaaaagcacgtggcgcaggccagccgtgaaggcaagaagtacgag
attcagcgcttcaagggcctgggcgagatgaacgccgaccagctctgggacaccaccatg
aatcccgaggggcgggtgctcaagcgcgtcagtatcgaagacctgctcattgccaacgag
gtctttgaggcgttgatgggcaccgacgtggggccgcgcaaggagttcattcgggagaac
gcgaggttcgccgagatcagcatttga
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