Deinococcus rubellus: N0D28_07995
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Entry
N0D28_07995 CDS
T08504
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
drb
Deinococcus rubellus
Pathway
drb03030
DNA replication
drb03410
Base excision repair
drb03420
Nucleotide excision repair
drb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N0D28_07995 (polA)
03410 Base excision repair
N0D28_07995 (polA)
03420 Nucleotide excision repair
N0D28_07995 (polA)
03440 Homologous recombination
N0D28_07995 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drb03032
]
N0D28_07995 (polA)
03400 DNA repair and recombination proteins [BR:
drb03400
]
N0D28_07995 (polA)
Enzymes [BR:
drb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N0D28_07995 (polA)
DNA replication proteins [BR:
drb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N0D28_07995 (polA)
DNA repair and recombination proteins [BR:
drb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N0D28_07995 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N0D28_07995 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UWX62713
LinkDB
All DBs
Position
complement(1538970..1541636)
Genome browser
AA seq
888 aa
AA seq
DB search
MMPAPDTAVLIDGHALAFRSYFALPPLTSKSGEPTHAILGFMRQLTKLMKQTSNQVIVVF
DPPVRTFRKEQYDDYKAGRAETPSDLPAQINRIRAIVDAVGLPRLEVNGYEADDVIGTLA
KKAEAHGMNAVIVTSDRDSYQLLTERVKVLTSDFKLLGPADVLEKYGVSVSQWVDYRSLT
GDASDNIPGAKGIGPKTASKLLQEHGTLDEVIARAQDGTLEPKGAREKILASLSNVYKSR
DLSCMVTDLPLDIEMATHAGAGDPATLDALLTELDLGSVRRDLEALRSGEIGESTPVAEP
ASLLREVPQAEWRTPGEGVMWGYLLSREDDLSAELLQAATYDSDVTRTAPLEFEPVEQES
LETTSSPEEALFEEVASNKKAKSKAKPKPEPLGHVNEAEFVGQREIRAAGAKALATHLQV
RGLKIEPGDDPLLIAYLLDPANTAMPAVSQRYLHARWPGDAAGRAALSGQLWELLLPQLD
EARLKLYYDIEKPLSQVLARMEVRGVKLDSAYLRGLSGAMGARIQTLEAEIHVHAGHVFS
VSSRDQLEAVLYDELQLETGRKTKLTGKRSTAVAALEPLRDEHPIIPALLEYRELSKLRG
TYLDPMPNLVNPRTGRLHTTFAQTIAATGRLSSLNPNLQNIPIRSAVGREIRKGFIAEAG
FTLLSADYSQIELRLLADISGDLLMQEAFQTGADIHRRTASQVLGVDENNVSIEQRRAAK
TVNFGVLYGMSAHRLSRDLGIPYADASGFIDRYFETYPGIRGYIDRTLAFGREHGYVETL
YGRRRYVPELVSTNRTVREAGERLAYNMPIQGTAADIIKIAMIRLDEPLMALGARMLLQV
HDELLVEAPLGKADEVAELVKATMMGAAQLSVPLNVEVGRGPDWFDTK
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgcccccgacaccgctgtcctgattgacgggcacgccctggccttccgctcg
tatttcgcactgccgccgctgaccagcaagagcggcgagccgacccacgccattctcggc
ttcatgcgccagctcacaaaactgatgaagcagaccagcaaccaggtgatcgtggtgttc
gacccgccggtcaggacctttcgcaaggagcagtacgacgactacaaggcgggccgcgcc
gagacgcccagcgacctcccggcccagatcaaccgtatccgcgccatcgtggacgccgtg
ggcctgccgagactggaagtcaacgggtacgaggccgatgacgtgatcggcacgctggcc
aagaaagccgaggcgcacggcatgaacgcggtgatcgtgacctccgatcgagacagctac
cagctgctgaccgagcgcgtcaaggtgctgaccagcgatttcaagctgctcggtccggca
gacgtgctggaaaagtacggcgtcagcgtctctcagtgggtcgattaccgctcgctgacc
ggtgacgccagcgacaacatccccggcgcgaagggcatcggccccaagacagcgtccaaa
ctcctccaggaacacggcaccctcgacgaggtgattgcccgcgcccaggacggcacgctg
gaacccaagggcgcacgcgagaagatcctggcgagcctgagtaacgtctacaagagccgt
gatctgtcgtgcatggtgactgatctgccactcgacatcgagatggcgacccacgcgggc
gcgggcgacccggcgacgctcgacgctctgctaaccgaactcgacctgggcagtgtacga
cgcgacctcgaagcacttcggagcggcgaaatcggcgagagcacccctgttgccgaaccc
gcaagcctactgcgcgaggtgccgcaggccgagtggcgcacccccggcgagggcgtgatg
tggggctacctgctgtcgcgcgaggacgacttgagcgctgagctgcttcaggccgcgact
tacgacagcgacgttacccgcaccgcaccgcttgagtttgagccggttgagcaggagtca
cttgaaaccacttcatcgcccgaagaagcgctatttgaggaagtggccagcaataagaaa
gccaaatcaaaggccaagcccaaacccgaaccgctcggtcacgtcaatgaagccgaattc
gtgggccagcgtgagatccgggcggcaggggccaaggcgctggcgacccacctgcaagtg
cgcggtctcaagattgagccgggcgacgacccgctgctgattgcctacctgctcgacccg
gccaacaccgccatgcccgccgtgagccagcgctacctgcacgcacgctggccgggcgac
gcggcggggcgggcagccctcagcggccagctctgggagctgctgctgccgcagctcgac
gaggcgcgactcaaactctactacgacatcgaaaaaccgctctcgcaggtgctggcccgc
atggaagtgcgcggggtcaagctcgacagcgcttacctgcgcgggctgagcggggcgatg
ggagcgcgcatccagacgctggaggccgagatccacgttcacgccgggcacgtcttctcg
gtgagcagccgcgatcagctcgaagcggtgctctacgacgaattgcagctcgaaacgggc
cgcaagaccaagctgaccggcaagcgctcgacggcggtagcggcgctggaaccgctccgg
gacgagcacccaatcattccggcgctgctggaataccgtgaactcagcaagttgcgcggc
acctacctcgaccccatgcccaatctggtcaacccccgcactgggcggctgcataccacc
ttcgcccagaccatcgcggcgacgggccgactgagcagcctcaaccccaacctccagaac
atcccgatccgctcggcggtgggccgcgagattcgcaagggctttatcgccgaggcgggc
tttaccttgctgagcgccgactactcgcagatcgagctgcggctgctggccgacatctcc
ggcgacctgctgatgcaggaagcttttcagaccggggccgacattcaccgccgcaccgcc
tcgcaggtgctgggcgtggacgagaacaatgtcagcatcgagcagcgccgggccgccaag
acggtcaattttggggtgctctacggcatgagcgcccaccgcctcagccgcgacctgggc
atcccctacgcagatgccagcggctttatcgaccgctatttcgagacctaccccggcatt
cgcggctacattgaccgcaccctggcgtttggccgcgaacacggctacgtcgagacgctg
tacggacggcggcgctacgttccggaactggtgagcaccaaccgcaccgtgcgcgaggcg
ggcgagcggctggcctacaacatgccgattcagggcaccgccgccgacatcatcaagatc
gccatgatcaggctggacgaaccactgatggcgttgggcgcgcggatgctgctgcaagtc
cacgacgaactgctggtcgaagccccactcggtaaggccgacgaggtggcagaactcgtc
aaggccaccatgatgggcgcggcccagctcagcgtgccgctgaatgtggaagtcggacgc
gggccggactggttcgataccaagtaa
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