Deinococcus rubellus: N0D28_08490
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Entry
N0D28_08490 CDS
T08504
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
drb
Deinococcus rubellus
Pathway
drb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N0D28_08490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
drb03400
]
N0D28_08490
Enzymes [BR:
drb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
N0D28_08490
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
N0D28_08490
DNA repair and recombination proteins [BR:
drb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N0D28_08490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
HscB_4_cys
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UWX62810
LinkDB
All DBs
Position
complement(1623783..1624613)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETTRRKIEPLLVGRILTRIEHDAPHKYTDTHKAEGRTVTGIGRRGKYLLLQLA
AHEAATAGEHSEDLELLVHLGMTGGFRLEAGPHTRVTLHTDQGAIYFNDARRFGKVAVVR
RGEYAAFPTLHNMGPEPLSEEFSEAEFVKAAASAGAVKPWLLSQKPVSGVGNIYADESLW
TSQVHPAQTRLKPAEARRLYTAIREVMTAAVAAGGSTLGDGTYRQHDGEAGAFQVQHHAY
ARAGEPCERCGTPIAKTVLAQRGTHFCPRCQTLKPR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgagaccacccgccgcaagatcgagccgctcctggtgggc
cgcatcctaacgcgcatcgaacacgacgcgccgcacaagtacaccgacacccacaaagcc
gagggccgcaccgtgaccggcatcgggcggcgcggcaagtacctgctactacaactcgcc
gcccacgaggccgccaccgctggcgagcacagcgaggacctagaactgctcgttcacctg
ggcatgaccggcggcttccggctggaagcggggccgcacacccgcgtcacgctgcatacc
gaccagggtgcaatttatttcaacgacgcccggcgcttcggcaaggtggcggtggtccgc
agaggcgagtacgccgccttccctaccctgcacaacatggggccggagccactctcggag
gagttcagcgaggccgagttcgtgaaggcggcggccagcgcgggggccgtcaagccctgg
ctgctgtcgcagaagccggtgtcgggcgtgggcaacatctacgccgatgagagcttgtgg
acaagccaggtgcacccggcccagacccggctcaagcctgccgaggcgcggcgtctctac
acggccatccgtgaggtgatgacggcagcggtggcggcgggcggcagtactctgggtgac
ggcacctaccgccagcacgacggcgaggcgggggcattccaggtgcaacaccacgcctac
gccagagcaggagagccgtgcgagcgctgcggcacgccgatagcgaagaccgtgctggcc
cagcgaggaacgcatttttgccccaggtgtcagaccctcaagccgcgctaa
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