Deinococcus rubellus: N0D28_13030
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Entry
N0D28_13030 CDS
T08504
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
drb
Deinococcus rubellus
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
drb03016
]
N0D28_13030
Enzymes [BR:
drb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N0D28_13030
Transfer RNA biogenesis [BR:
drb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N0D28_13030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UWX63643
LinkDB
All DBs
Position
2535111..2536520
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AA seq
469 aa
AA seq
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MTAPQHPSTPPDDLTPAQRTEVELLARGKAERSKVIRDAKLNETPEIAHEFLLRRGVWDE
LRVPYAERAGIDLSDIALPVPELPGETRLDLTHLPAYAIDDEGSLDPDDAISLEPLSSGW
RLWVHVADVAALIGPNSPLDLEARARGATLYLPDRIYSMVPNSVVEQLGLGLHPTSPALS
ISIDFDAEWNADTVDVQLTTIKAERLSYSAAQLRLDAGKEPFVTLRSLYLASKKQREAEG
ALTIDLPEVRVKLHGDEIEIKSLPRPETRLIVQECMTLAGWAAAIYADDLEIALPYATQD
APTREVRGDDLPAHWARRKTLARTRFRPSPGAHHGMGLDAYAQATSPMRRYLDLVVHQQL
RAALKEEPGLTGGEIAGRVAQAEMNAGGTRTTERLTRRHYTLVMLKRQPGRIWDAQVVER
RGPQATVLIPELALDTLMSTAAPTGTLLKVQVAEVDLPNLGVRLREIRG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccccagcaccccagcaccccacccgacgacctgacgcctgcccaacgcacc
gaggtggaactactggcacgcggcaaggctgagcgctccaaggtgatccgcgacgccaag
ctcaacgagacgccggagatcgcccacgagtttttgctgcgccggggggtgtgggacgag
ttgcgggtgccgtacgccgagcgggcgggcattgacctgagtgacatcgccctgccggtg
cccgaactgccaggtgagacccgcctcgacctgacccaccttccggcctacgccatcgac
gacgagggcagcctggaccccgacgacgccatcagcctggaaccactctccagcggctgg
cggctgtgggtgcatgtggcggacgtggccgcactgatcgggccgaacagcccgctggac
ctggaagcccgcgcgcgcggcgcgaccctgtatctgccggaccgaatttacagcatggtg
ccgaactcggtggtggagcaactcggcctgggcctgcacccgacctccccggcgctgagt
atcagcatcgacttcgacgccgagtggaacgccgacacggtggacgtgcaactgaccacc
atcaaagccgagcggctgagttacagcgccgcgcaactccggctggacgcgggcaaggag
ccgttcgtgacgctcagatcactctatcttgccagcaaaaagcagcgcgaggccgagggc
gcactgaccatcgacctgccggaggtgcgcgtcaagttgcacggcgacgagattgaaatc
aaatccctgccccggcccgagacccgcctgatcgtgcaggagtgcatgacgctggcgggc
tgggccgccgccatctacgccgacgacctggagattgcgctgccctacgccacccaggac
gcccccacccgcgaggtgcgcggcgacgaccttccggcgcactgggcacgccgcaagacg
ctggcccgcacccgcttccggccttcaccgggggcacatcacggcatgggcctggacgcc
tacgcacaggccacctcgccgatgcgccgctacctcgatctggtggtgcaccagcagctc
cgggccgccctcaaggaggagcctggcctgacggggggcgagatcgccgggcgggtcgcg
caggccgagatgaacgcaggcggcacccgcaccaccgagcgactcacccgccgccactac
accctggtgatgctcaagcgccagcctgggcgcatctgggacgcgcaggtggtcgagcgg
cgcggcccgcaggccaccgtgctgattcccgaactggccttagataccctgatgagcacg
gcagcccccaccggcacgctgctgaaggtgcaggtggcggaagtagatctgccgaatctg
ggggtgcggctgcgggagatacgggggtga
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