Deinococcus rubellus: N0D28_14760
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Entry
N0D28_14760 CDS
T08504
Name
(GenBank) RsmD family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
drb
Deinococcus rubellus
Brite
KEGG Orthology (KO) [BR:
drb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drb03009
]
N0D28_14760
Enzymes [BR:
drb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
N0D28_14760
Ribosome biogenesis [BR:
drb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
N0D28_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_12
Methyltransf_31
Methyltransf_11
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
UWX63960
LinkDB
All DBs
Position
2888073..2889416
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AA seq
447 aa
AA seq
DB search
MKRHPSRHQLSHQTPPTPSAGPAPRRTPPTPEVLILDVEKVVAGGLGLARHAGGVVLVRG
ALGGEQVEAQVRTARGVRQGRLIRVLKPSPDRVEAPGLPTADLAHASYPAQLRIKRELVE
EALARIAKLEHPVAETVASPRQWGYRNGAQYLITPSGLAYRERSGPGIWRLSGPDPLIMD
AVQAVMARLDPQFLDPAQEIAFRGSRLSGEVVVTLIGPGEPRQYLRASDRLLDAGVVGVS
LASPATQPAGRRFSAGVKLIAGEGVTLEQLGDVRVGLSASGFAQVNPEAAGLAYRLAAQL
AGSGERATDLYGGSGAIGRHLARTFTQVVVLDTATEALKRGQRDVQRSGERNVVFRRTDA
DFAPGDSLPDADVIVVDPPRAGLSPEARHAIDANAARTLVYVSCDPATWARDVGDLVNRG
WQLGEVVPHDFYPQTSHVEVISRLTRR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtcaccccagccgccatcagcttagccaccagactccacccactccctcagcc
gggccagccccgcgccgcaccccgcccacccccgaagtcctcattctcgatgtcgagaag
gtcgtggcgggcggcctgggcctggcccggcacgcgggcggcgtggtgctggtgcgcggc
gcgctgggcggcgagcaggtcgaggcccaggtcaggacagcgcggggagtgcgccagggc
cgcctcattcgggtgctgaagcccagccctgaccgggtcgaggcccccgggttgcccacc
gctgacctggcccacgccagctacccggcccagctccgcatcaagcgcgaactcgtcgag
gaggctctggcgcgcatcgccaagctggaacatccggtggccgagacggtggcgagtccc
cggcagtggggctaccgcaacggcgcgcagtacctgatcactcccagcggcctggcctac
cgcgagcgcagcgggccaggcatctggcggctcagcggccccgacccgctgatcatggac
gcggtgcaggcggtcatggcgcggctcgatccccagttcctcgacccggcccaggaaatc
gccttccggggcagccgcctgagcggtgaggtggtcgtcaccctgatcggccccggcgag
ccgcgccagtacctgcgggcctcagaccgtctgctcgacgcgggcgtggtcggggtgtcg
ctggccagcccggccacccaaccagcggggcggcgcttctcggcgggcgtcaagctgatc
gccggggagggcgtcaccctggagcagctcggcgacgtgcgggtgggtctgtcggcctcc
ggcttcgcgcaggtcaaccccgaggcggcggggctggcctaccggctggcggcgcaactg
gctggcagcggcgagcgggccaccgacctctacggcggcagcggcgcgattggccgccac
ctggcgcgcacattcactcaggtggtggtgctcgataccgctaccgaggccctcaagcgc
ggtcagcgcgacgtgcagcgcagcggtgagcgtaacgtggtgtttcgccgcactgacgcc
gacttcgctcccggcgactcacttcccgacgccgacgtgatcgtggtcgatcctccacgc
gcggggctgagcccggaagcccgccacgccatcgacgccaacgccgcccggacgctggtg
tatgtgtcgtgcgatccggccacctgggcgcgcgacgtgggtgatctggtgaaccggggc
tggcaactcggcgaggtcgtgccgcacgatttctacccccagaccagccacgtggaggtg
atcagccgcctgacccggcgctga
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