Draconibacterium halophilum: G0Q07_01495
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Entry
G0Q07_01495 CDS
T06417
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
drc
Draconibacterium halophilum
Pathway
drc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G0Q07_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drc03019
]
G0Q07_01495
Enzymes [BR:
drc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G0Q07_01495
Messenger RNA biogenesis [BR:
drc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G0Q07_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
CMS1
NaeI
Sacchrp_dh_NADP
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIA06484
UniProt:
A0A6C0R810
LinkDB
All DBs
Position
complement(404348..405616)
Genome browser
AA seq
422 aa
AA seq
DB search
MKFEDLKIHPAILKALKDENYTEPTSIQAQAIPLVLEKKDVLGSAQTGTGKTAAFAIPII
QHLINNNQHEKGRRQIKSLIVTPTRELAIQIGESFNAYGKYSNLQNTVIFGGVPQNPQVR
QLQKGIDILIATPGRLLDLINQNHISLRDVKYFVLDEADRMLDMGFIHDIKKLLRILPKE
RQSLFFSATMPTKIVKLSQEILINPKKVAVNPVSSTAETIQQQIYFTNKSSKKNLLLHIL
KNKDIEQVLLFSRTKHGADRIVRNLRHNKIESAAIHGEKSQNQRQKALEQFKKGQIRVLV
ATDIAARGIDIDKLRYVINYDIPNESETYVHRIGRCGRAGEEGVAISICEPEENAYVKDI
EKLIKLKINVSDNNPFPQTDKPMSQKEKKEVDAEKRRERQKFFENRNKKRGNQNPGFRRK
KR
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgaagatttaaagatacatcccgcaatactaaaagcattaaaagacgaaaac
tatacggaaccgacttccattcaggcacaggctattcctctggtattagaaaaaaaagat
gtgttgggcagtgcacaaaccggcaccgggaaaaccgcagcttttgccattccaataatt
caacatttaataaataataatcagcacgaaaagggtagacgacagattaaatcgctgata
gttactcctacccgcgagttagccatacaaataggcgaaagttttaatgcttatggcaaa
tacagcaacttgcaaaacactgttatttttggcggtgtaccacaaaatccgcaagttcga
caactgcaaaaaggcatagatatactgattgccacacccgggcgattactcgatttaatc
aatcagaatcatatttcgctgcgtgatgtgaagtattttgtgctagacgaggcagaccga
atgctcgacatgggttttatacacgacataaaaaaactgctacggatattacccaaagaa
cggcagtcgctgtttttttcggccactatgccaaccaaaattgtgaagctttcgcaagaa
atattaatcaaccccaaaaaagtggcggttaatccggtttcctctactgccgaaaccata
cagcaacaaatatatttcaccaataaaagcagtaaaaagaacttactgttacacatactt
aagaataaagatatagaacaggtacttctgttttcgagaaccaagcacggtgccgatcgt
attgtacgcaacctgcggcacaataaaattgaaagtgcagctattcatggtgaaaaaagt
cagaatcaacgacaaaaggccttagaacaatttaaaaagggacaaatacgtgtattggta
gcaaccgatattgcagcaaggggaattgatattgacaaactccgctatgtcatcaactac
gacatacccaacgagtccgaaacttatgtacaccgtattggccgatgtggccgggcgggt
gaagaaggtgtagcaatatctatttgtgaaccggaagaaaacgcttatgtgaaagacatt
gaaaaattgataaaactaaaaattaacgtttccgacaataatccttttccgcagaccgac
aagccgatgagccaaaaggagaagaaagaggtggatgcagaaaaacgtcgtgaacgccag
aaattttttgaaaaccgtaacaaaaagcggggaaatcaaaacccgggttttagaagaaag
aaaaggtaa
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