Draconibacterium halophilum: G0Q07_09200
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Entry
G0Q07_09200 CDS
T06417
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
drc
Draconibacterium halophilum
Pathway
drc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G0Q07_09200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drc03019
]
G0Q07_09200
Enzymes [BR:
drc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G0Q07_09200
Messenger RNA biogenesis [BR:
drc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G0Q07_09200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Helicase_RecD
AAA_30
Utp25_C
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QIA07891
UniProt:
A0A6C0RFP2
LinkDB
All DBs
Position
complement(2279290..2280537)
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AA seq
415 aa
AA seq
DB search
MKFEEYSISNTIKTNLEKKGFRRPTDIQFKAIPPVLKGEDVLAIAQTGTGKTAAFAIPVI
HNIQQSKLKQKNVGISCLVMAPTHELAQQISEVFLAIAKNTGVKITVIIGGVDQDPQISR
LQGGTDVLVATPGRLFDLVSQGYLKLQDVKTLILDEADHMLDLGFIKDINDLMRFLPSKR
QTLFFSATINKKIKKLAYSLVSKPIRIQISPKDPVAKTIEHQVAFIELDDKRAFLERLVG
ENPEAKILAFVRTKVRAERVKKAMTRVEIDSDTIHSDKDQAERDQTMQRFKSGQLKLLIA
TDVSARGIDIPNVDFVVNYDLPEVAANYVHRVGRTGRGNQKGKAVTFCSPEEREILDEIE
GFLGKDIHRLEIDKNVYKETLDFTKDTDFNWQKLMRDNDRELEDVKKKKKKKKKK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcgaagaatattccatatcgaacaccataaagaccaacctggagaaaaaggga
ttccgtcgtccgactgatattcagttcaaagccataccgcccgtattaaaaggcgaagat
gtattggccatcgcccaaacaggaacaggaaagaccgcggcttttgccattccggttatt
cataatatccagcaaagcaaactcaaacaaaaaaacgtgggaataagctgtttggttatg
gcacccacgcacgaactggcacagcaaatcagtgaagtatttttagccattgccaaaaat
acaggtgtaaaaattacggttatcatcggtggtgttgatcaggatccacaaatcagccgt
ttacaaggcggtaccgatgttttggtagctactcccggtcgtttgttcgacctggttagt
caaggctacctgaaactgcaggatgtgaaaacgctgattttagatgaagccgaccacatg
ctcgatcttggttttattaaagatatcaatgacttaatgcgttttcttccttcaaagcgt
cagaccttgttcttctcggcaaccatcaataaaaagattaaaaaacttgcttattcgctg
gttagcaagcctattcgcattcaaatttcgccaaaagatccggtggcaaaaaccattgag
caccaggtagcttttattgaattggatgataaaagagcttttctggaacgattagttggc
gaaaatccggaagcaaaaatcctggcgttcgtacgaacaaaagtacgtgccgagcgcgtg
aaaaaggcgatgactcgtgttgaaattgatagtgatactattcacagcgacaaagatcag
gcagaacgcgaccaaaccatgcaacgttttaaaagtgggcaactaaaattacttattgct
accgatgtgagtgcccgtggaattgatattccgaacgttgattttgttgtaaattacgac
cttcctgaagttgcagcaaactatgtacaccgagtgggacgtaccggccgcggcaatcaa
aaagggaaagccgttacgttttgcagcccggaagaacgagaaattctggacgaaattgag
ggatttttgggcaaagatattcatcgtcttgagattgataaaaacgtgtacaaagaaacg
cttgattttacaaaagacaccgatttcaattggcagaaactaatgcgcgataacgatcgt
gaattagaagacgtaaagaaaaaaaagaagaagaaaaagaaaaaataa
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