Draconibacterium halophilum: G0Q07_15895
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Entry
G0Q07_15895 CDS
T06417
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
drc
Draconibacterium halophilum
Brite
KEGG Orthology (KO) [BR:
drc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
drc03009
]
G0Q07_15895 (rlmD)
Enzymes [BR:
drc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
G0Q07_15895 (rlmD)
Ribosome biogenesis [BR:
drc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G0Q07_15895 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRM5-TYW2_MTfase
TRAM
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
N6_N4_Mtase
PrmA
Methyltransf_11
RrnaAD
Rv2466c-like
PCMT
FtsJ
SatD
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QIA09106
UniProt:
A0A6C0RGI8
LinkDB
All DBs
Position
complement(3914625..3916040)
Genome browser
AA seq
471 aa
AA seq
DB search
MGRRKRNKPFYENVTIEDIGSEGKAVARVGDVVVFTKLAVPGDVVDLQVTKKRKRYQEAL
VKEFKTYSEDRAEAFCKHFGVCGGCKWQILPYEKQLYYKQKQVQDQLSRIGKMDMPEILP
IRGSEKNTFYRNKMEFTFSNKRWLSFEEIERDEEIKDPNALGFHVPGLFDKIVNIQKCWL
QDDPSNQIRNFIYNYALSAKLPFFDIREQSGFLRTLIIRTTSTGELMVIVSFFYEDQPAR
EQLLEAVKNEFPDITSLLYVINSKGNDTITDQEIKVFAGRDYILEEMEGLKFKIGPKSFY
QTNSDQAYELYQVTRNFAELTGNETVYDLYTGTGTIANFVAKNAKKVVGIEYVPEAIEDA
KLNSELNNIGNTSFFAGDMKDVLNETFINEHGSPEVVITDPPRAGMHADVVETILKMEPQ
KIVYVSCNPATQARDLAMFDSLYQIEKIQPVDMFPHTHHVENVVLLSKRLD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgggaagaagaaaaagaaataagccattttacgagaatgtaacgattgaagatattggg
tctgaaggaaaagctgttgcacgtgttggcgatgtagtggtttttaccaaactggccgtt
ccaggagacgtggttgacttgcaggtaacaaagaaaagaaagcgttaccaggaagcctta
gtaaaagagtttaaaacttacagcgaagatagagccgaagctttctgtaagcattttgga
gtatgcggtggatgcaagtggcaaattctgccatacgaaaagcaattgtattacaagcaa
aagcaagtgcaggatcaactttcaaggattgggaagatggatatgccggaaatattgcca
attcgtggttctgaaaagaatactttttaccggaataaaatggagttcactttctctaac
aaacgctggttaagttttgaggagatagaacgcgatgaggaaataaaggacccgaacgcg
cttggttttcatgttcccggattgtttgacaaaatcgtaaatattcaaaaatgctggttg
caagacgatccgtcgaaccaaattcgtaactttatttataactatgcgctgagtgcaaaa
cttccttttttcgatattcgtgaacagagtggtttcttgagaacattgattatcagaaca
acctcaacaggggaattaatggttattgtaagtttcttttacgaagaccaaccggcacgc
gaacagcttttggaagccgttaaaaatgaattccccgatatcacttcgttgctatatgta
attaactcgaaaggaaacgataccattactgatcaggaaattaaagtatttgcaggacgt
gattatatactagaagaaatggagggcttaaagtttaaaatagggcctaaaagcttttat
caaaccaattctgatcaagcgtatgaattgtatcaagtaacccgaaatttcgctgagctt
acagggaatgaaactgtttacgacctttataccggaaccggaactattgcaaactttgtg
gcaaaaaacgctaaaaaggtagtgggtattgaatatgtgcctgaagcgattgaggatgct
aaactaaattcggaattgaataatattgggaacacatctttttttgccggagatatgaaa
gatgtacttaacgaaacttttataaacgaacatggtagcccggaggtggtaattacagat
ccgccacgggcaggaatgcatgccgatgttgtggagaccattttaaagatggagccgcaa
aaaattgtttacgtaagttgtaatcctgctactcaggcacgcgaccttgcaatgttcgat
tcgttgtaccaaattgagaaaattcagcccgttgatatgtttccccatacacatcatgtc
gaaaatgtggtactgctcagtaaaaggcttgattaa
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