Deinococcus radiophilus: LMT64_00530
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Entry
LMT64_00530 CDS
T07688
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
drd
Deinococcus radiophilus
Pathway
drd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMT64_00530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
drd03021
]
LMT64_00530
03400 DNA repair and recombination proteins [BR:
drd03400
]
LMT64_00530
Enzymes [BR:
drd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMT64_00530
Transcription machinery [BR:
drd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LMT64_00530
DNA repair and recombination proteins [BR:
drd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LMT64_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
RecG_dom3_C
IMS_HHH
RAD51D_N
DUF371
Motif
Other DBs
NCBI-ProteinID:
UFA50445
LinkDB
All DBs
Position
91579..92565
Genome browser
AA seq
328 aa
AA seq
DB search
MDQKRPQLKARVEGNYGEFVLEPLNRGYGVTIGNPIRRILMSSIQGTAVTSVYIEDVLHE
FSTIPGVKEDVIRLILNLKELVVKFHAPGPKTLTLRAQGQGVIRASDFEVPSDAEIVNPD
LEIANLADDGQLVMEVRVEEGEGYMPAEKHATKDRINSIPVDAMFNPVRRVAYHVENTRV
GRQTDLDKLILRIWTDGSATPQDVLDQAIEILREELMVFGTVEELEEVESGVVEYTMSAE
PTQAETEAATETVDSTESDFVGGEPSVSLEGLGLTTRVLHSLKEEGIDSVDALCALSDRD
LKKVPGIGERSLDEIKQQLAQFGKALRD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaagcgccctcaactcaaagcccgcgtcgaaggaaactatggcgagttcgtg
ctcgaaccacttaaccgtggttacggggtcaccatcggcaaccctattcggcgcattctg
atgtcctcgattcagggaactgccgtcaccagtgtttacattgaagacgtgctgcacgag
ttctcgaccattcctggagtcaaagaagatgttattcgactgattctgaacctcaaggaa
ctggtggtgaagtttcacgctcccggtcccaagaccctgaccctacgtgctcagggccaa
ggggtgatccgggcctctgactttgaagttccaagtgacgccgaaatcgtgaatccggat
ctggaaattgccaacctggccgatgacggtcaattggtgatggaagtgcgcgtagaagaa
ggcgaaggctacatgcctgccgagaagcacgccaccaaggaccgcatcaactcgattccg
gtagacgcgatgttcaacccggtgcgccgtgtggcctaccacgtggaaaacacccgtgtg
ggccgtcagaccgacctggataagttgatcttgcgcatctggacggatggcagcgccacc
ccacaggatgtgctggaccaagccattgagattctgcgagaagaattaatggtgttcggt
acggtggaagaactagaagaagtcgaaagcggcgtggtggagtacaccatgtccgccgag
cctactcaggctgaaaccgaagctgccactgaaactgtggacagcaccgaatccgacttt
gtcggtggtgagccgagtgtcagcctggaaggtctgggactgaccacccgcgttctgcac
tcgctcaaagaagaaggcattgacagcgttgatgccctgtgcgccctgagtgaccgcgac
ctgaaaaaggtaccgggcattggtgagcgcagcctagatgagatcaaacagcaactggcc
cagtttggcaaggcgctgcgcgactaa
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