Deinococcus radiophilus: LMT64_03610
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Entry
LMT64_03610 CDS
T07688
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
drd
Deinococcus radiophilus
Brite
KEGG Orthology (KO) [BR:
drd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drd03032
]
LMT64_03610
03400 DNA repair and recombination proteins [BR:
drd03400
]
LMT64_03610
Enzymes [BR:
drd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LMT64_03610
DNA replication proteins [BR:
drd03032
]
Prokaryotic type
DNA Topoisomerases
LMT64_03610
DNA repair and recombination proteins [BR:
drd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LMT64_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
UFA50996
LinkDB
All DBs
Position
complement(686055..687086)
Genome browser
AA seq
343 aa
AA seq
DB search
MPSRTEALQDEYLRRTGNEPGKFRYFWPDGKRYTDKAGIARIAALAVPPGYQDVYVSPDA
DAELQAFGRDAAGRLQYRYHADFVQGRALKKWQRLSRFAGTLADLRSLTTADLRRAELPP
RKVLALMTRLLHIAHFRVGSDTYARANKTYGLSTLRKRHVSVEGSTVTFNFKGKHGIQQS
KAVVDRTIAGNIEKLLELPGQHLFQTVDEGTKRRIKAAELNAYLREQIGPFTAKDFRTWG
GTLLAAEFLAEYGAVEGDKATKKVLLECVRTVADDLGNTPAVTREHYICPVIFDRYLEGK
VLDDYEPRAGRVPAALEGLTRSEQALGRMLDSEQSVRARRRRA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcaccgaagccctgcaagacgaatacctgcgccgcaccggcaatgaaccg
ggcaagttccgttatttctggcctgacggaaaacgttataccgacaaagcaggcatcgcc
cgcatcgccgcgctggcggtgccgccgggctatcaggacgtctacgtctcccccgatgcc
gacgccgagttgcaggcgtttgggcgtgatgcggcggggcggctacagtaccgttaccac
gccgatttcgtgcaggggcgggcgctgaaaaagtggcagcggctctcgcgtttcgcaggc
acgctggccgatctgcgctccctgaccacggcagacctgcgccgcgccgagctgccgccg
cgtaaagtgctggccctgatgacccgcctgctgcacatcgcccacttccgggtgggcagc
gacacctacgcgcgcgccaacaagacctatggcctcagcactctgcgcaagcgccacgtg
agcgtagaaggcagcaccgtgactttcaatttcaagggcaaacacggcattcagcagagc
aaggcggtggtggaccggaccattgcgggcaacatcgaaaagctgctggagttgccgggc
cagcacctgttccagacggtggatgagggcaccaagcgccgcatcaaggcggccgagctg
aacgcctacctgcgcgagcagatcggaccctttaccgccaaggacttccggacctggggc
ggcaccctgctggccgccgaattcctggcggaatacggggcggtggagggcgacaaggcc
accaaaaaagtgctgctggaatgtgtccggacagtggccgacgacctgggcaacacgccc
gccgtgacccgcgagcattacatctgcccggtgatttttgaccgttacctggaaggcaag
gtgctggacgattatgagccgcgtgccgggcgcgtgcccgccgcccttgagggcctgacc
cgctccgagcaggccctggggcggatgctggattccgagcagagcgtccgcgcccgtcgc
cgcagggcgtag
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